BP913136
Clone id YMU001_000026_H04
Library
Length 562
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000026_H04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TCTAGTCACATGCTTATTCGTGAAGTTCCTTTGTGTTGTAAAGTTAAAGTAAAGTTTCGG
GTGATATCCTACATCTACCGCCCTACGGTCCAGTTTCATGTTCCGTTGCCGGACAGAATC
ACTTTTTCCTCAAGAAGTGAGCCTCAATTGGTTTTTGAGCAAGAGACACAAAGCACAGGA
ACTTGGAATTACACTATGGCTGACAGGACAGATGACACAAGGGAAGAGAGTTCCTCTTCA
CAGGACACACAGGAAAGTCCGCATGTTCCTACATAACCTTTTCAGCGTTCGCCCTGCAAA
AAAGTGGTCAAATTAGGGCTGATTTTTTGTTGCGTTTTTAGGGTTTGCAAGTATGAACCA
AGATGAGATAGGAAGAGGTCTCACGATGCTAGACTGACCACTAGATCTCCTGCGGAGTGA
TGTGGGTCTGCCAGGTGGCACGCTGGTCGCCGATTCTCTGAGGCGATTGCTTGGATTCTT
TGACACATTGGTAGATCATCTTGAAATTTGAGCTTACTTAGTCGTGGATAGTACACTACA
GTGTTCTGGAATTATTGTCGGT
■■Homology search results ■■ -
sp_hit_id P23913
Definition sp|P23913|LBR_CHICK Lamin-B receptor OS=Gallus gallus
Align length 37
Score (bit) 33.1
E-value 0.97
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913136|Adiantum capillus-veneris mRNA, clone:
YMU001_000026_H04.
(562 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P23913|LBR_CHICK Lamin-B receptor OS=Gallus gallus GN=LBR PE=... 33 0.97
sp|P07527|WEE1_SCHPO Mitosis inhibitor protein kinase wee1 OS=Sc... 32 2.8
sp|P72940|CYSC_SYNY3 Probable adenylyl-sulfate kinase OS=Synecho... 30 8.2

>sp|P23913|LBR_CHICK Lamin-B receptor OS=Gallus gallus GN=LBR PE=2
SV=1
Length = 637

Score = 33.1 bits (74), Expect = 0.97
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -2

Query: 501 R*STNVSKNPSNRLRESATSVPPGRPTSLRRRSSGQS 391
R S + S +PS R R + S PGRP RRRSS S
Sbjct: 63 RKSQSSSSSPSRRSRSRSRSRSPGRPAKGRRRSSSHS 99


>sp|P07527|WEE1_SCHPO Mitosis inhibitor protein kinase wee1
OS=Schizosaccharomyces pombe GN=wee1 PE=1 SV=1
Length = 877

Score = 31.6 bits (70), Expect = 2.8
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Frame = -2

Query: 495 STNVSKNPSNRLRES--------ATSVPPGRPTSLRRRSSGQSSIVRPLPISSWFILANP 340
S+N S + S LR S AT + P P+SL ++ SS P +S+ L P
Sbjct: 4 SSNTSSHRSYGLRRSQRSMNLNRATLLAPPTPSSLYDANNSTSSTSSQKPNTSFTSLFGP 63

Query: 339 KNATKNQP*FDH 304
+ T + P F H
Sbjct: 64 RKQTTSSPSFSH 75


>sp|P72940|CYSC_SYNY3 Probable adenylyl-sulfate kinase
OS=Synechocystis sp. (strain PCC 6803) GN=cysC PE=3 SV=1
Length = 177

Score = 30.0 bits (66), Expect = 8.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2

Query: 176 QELGITLWLTGQMTQGKRVPLHRTHRKVR 262
Q+ G+T+WLTG GK H +K+R
Sbjct: 2 QQRGVTIWLTGLSGAGKTTITHALEKKLR 30


tr_hit_id B6KHW2
Definition tr|B6KHW2|B6KHW2_TOXGO SRS domain-containing protein OS=Toxoplasma gondii ME49
Align length 27
Score (bit) 33.9
E-value 6.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913136|Adiantum capillus-veneris mRNA, clone:
YMU001_000026_H04.
(562 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6KHW2|B6KHW2_TOXGO SRS domain-containing protein OS=Toxoplas... 34 6.3

>tr|B6KHW2|B6KHW2_TOXGO SRS domain-containing protein OS=Toxoplasma
gondii ME49 GN=TGME49_051960 PE=4 SV=1
Length = 853

Score = 33.9 bits (76), Expect = 6.3
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2

Query: 101 FRCRTESLFPQEVSLNWFLSKRHKAQE 181
+RC++E+L E+SL WF+ + H+A E
Sbjct: 148 YRCKSEALIVAEISLIWFIKQYHEASE 174