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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913144
Clone id YMU001_000027_A03
Library
Length 161
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000027_A03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GCCTTCTCGTCTTCAATGTGTCATATAATCATTGGACAGGCCCAATTCCAGAGATTCTCA
CACACATGAGCCCCAACAACTTGATGAACAACATGGATTCATGTGGTGCTTCTCTACCAA
ATGCATGTCCAATACAACAAGTGACAGAGAGCAGTGGAACG
■■Homology search results ■■ -
sp_hit_id O48788
Definition sp|O48788|Y2267_ARATH Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana
Align length 38
Score (bit) 33.9
E-value 0.25
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913144|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_A03.
         (146 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O48788|Y2267_ARATH Probable inactive receptor kinase At2g2673...    34   0.25 
sp|Q9FHK7|Y5516_ARATH Probable receptor kinase At5g05160 OS=Arab...    33   0.33 
sp|O22476|BRI1_ARATH Protein BRASSINOSTEROID INSENSITIVE 1 OS=Ar...    33   0.57 
sp|Q9FMD7|Y5659_ARATH Probable inactive receptor kinase At5g1659...    30   3.7  
sp|P93194|RPK1_IPONI Receptor-like protein kinase OS=Ipomoea nil...    30   3.7  
sp|Q94C77|RPKL_ARATH Receptor protein kinase-like protein At4g34...    29   8.2  

>sp|O48788|Y2267_ARATH Probable inactive receptor kinase At2g26730
           OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1
          Length = 658

 Score = 33.9 bits (76), Expect = 0.25
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +3

Query: 3   LLVFNVSYNHWTGPIPEILTHMSPNNLMNNMDSCGASL 116
           L+ FNVS N+  G IP  L+  S  +   N+D CG  L
Sbjct: 186 LVDFNVSNNNLNGSIPSSLSRFSAESFTGNVDLCGGPL 223


>sp|Q9FHK7|Y5516_ARATH Probable receptor kinase At5g05160
           OS=Arabidopsis thaliana GN=At5g05160 PE=1 SV=1
          Length = 640

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 18/40 (45%), Positives = 23/40 (57%)
 Frame = +3

Query: 9   VFNVSYNHWTGPIPEILTHMSPNNLMNNMDSCGASLPNAC 128
           V N+SYN+ +GPIPE L      + + N   CG  L NAC
Sbjct: 198 VVNLSYNNLSGPIPEHLKKSPEYSFIGNSLLCGPPL-NAC 236


>sp|O22476|BRI1_ARATH Protein BRASSINOSTEROID INSENSITIVE 1
           OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1
          Length = 1196

 Score = 32.7 bits (73), Expect = 0.57
 Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
 Frame = +3

Query: 3   LLVFNVSYNHWTGPIPEILTHMSPNNLMNNMDS---CGASLPNAC 128
           L V ++S+N ++G +PE LT++S + L  ++ S    G  LPN C
Sbjct: 367 LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLC 411



 Score = 29.6 bits (65), Expect = 4.8
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +3

Query: 3   LLVFNVSYNHWTGPIPEI--LTHMSPNNLMNNMDSCGASLPNACP 131
           L   ++S N+ +GPIPE+       P   +NN   CG  LP   P
Sbjct: 728 LTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDP 772


>sp|Q9FMD7|Y5659_ARATH Probable inactive receptor kinase At5g16590
           OS=Arabidopsis thaliana GN=At5g16590 PE=1 SV=1
          Length = 625

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +3

Query: 12  FNVSYNHWTGPIPEILTHMSPNNLMNNMDSCGASLPNACPI 134
           FNVS N   G IP+ L+ M     + N+  CG  L +ACP+
Sbjct: 185 FNVSSNQLNGSIPDPLSGMPKTAFLGNL-LCGKPL-DACPV 223


>sp|P93194|RPK1_IPONI Receptor-like protein kinase OS=Ipomoea nil
           GN=INRPK1 PE=2 SV=2
          Length = 1109

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = +3

Query: 3   LLVFNVSYNHWTGPIPEILT---HMSPNNLMNNMDSC 104
           L   N+S+N ++GP+P  LT   + SP +   N D C
Sbjct: 691 LTFINISHNLFSGPVPPSLTKFLNSSPTSFSGNSDLC 727


>sp|Q94C77|RPKL_ARATH Receptor protein kinase-like protein At4g34220
           OS=Arabidopsis thaliana GN=At4g34220 PE=2 SV=1
          Length = 757

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +3

Query: 15  NVSYNHWTGPIPEILT--HMSPNNLMNNMDSCGASLPNACPI 134
           ++S+N+ TGPIP  L+  +    +   N + CG  L   C I
Sbjct: 250 DLSFNNLTGPIPSSLSLLNQKAESFSGNQELCGKPLKILCSI 291
tr_hit_id A9RDS4
Definition tr|A9RDS4|A9RDS4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 44
Score (bit) 41.6
E-value 0.02
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913144|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_A03.
         (146 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RDS4|A9RDS4_PHYPA Predicted protein OS=Physcomitrella paten...    42   0.020
tr|Q2LJM3|Q2LJM3_MALDO Putative receptor kinase OS=Malus domesti...    41   0.027
tr|A7PD42|A7PD42_VITVI Chromosome chr17 scaffold_12, whole genom...    40   0.045
tr|A7PAW9|A7PAW9_VITVI Chromosome chr16 scaffold_10, whole genom...    40   0.045
tr|Q9SCT4|Q9SCT4_ARATH Putative uncharacterized protein T18N14.1...    40   0.077
tr|A7PMD4|A7PMD4_VITVI Chromosome chr14 scaffold_21, whole genom...    39   0.10 
tr|A8E195|A8E195_TRITU Putative polygalacturonase-inhibiting pro...    39   0.13 
tr|A0AAQ4|A0AAQ4_WHEAT Polygalacturonase inhibiting protein 1 OS...    39   0.13 
tr|A5ATC1|A5ATC1_VITVI Putative uncharacterized protein OS=Vitis...    39   0.17 
tr|A2WXU9|A2WXU9_ORYSI Putative uncharacterized protein OS=Oryza...    39   0.17 
tr|Q9M0G7|Q9M0G7_ARATH Receptor protein kinase-like protein OS=A...    38   0.22 
tr|Q8L4U4|Q8L4U4_ORYSJ Putative receptor-like protein kinase (Le...    38   0.22 
tr|Q0JH05|Q0JH05_ORYSJ cDNA, clone: J065203A13, full insert sequ...    38   0.22 
tr|B5LMT0|B5LMT0_MALDO SMA9 OS=Malus domestica GN=SMA9 PE=4 SV=1       38   0.22 
tr|A9STW0|A9STW0_PHYPA Predicted protein OS=Physcomitrella paten...    38   0.22 
tr|A3C6R5|A3C6R5_ORYSJ Putative uncharacterized protein OS=Oryza...    38   0.22 
tr|A2Z9M8|A2Z9M8_ORYSI Putative uncharacterized protein OS=Oryza...    38   0.22 
tr|A5BS27|A5BS27_VITVI Putative uncharacterized protein OS=Vitis...    38   0.29 
tr|Q40902|Q40902_PETIN Receptor kinase OS=Petunia integrifolia G...    37   0.38 
tr|A9SZQ7|A9SZQ7_PHYPA Predicted protein OS=Physcomitrella paten...    37   0.38 
tr|Q9LYN1|Q9LYN1_ARATH Putative uncharacterized protein F18O21_6...    37   0.50 
tr|Q9FL51|Q9FL51_ARATH Receptor protein kinase-like protein OS=A...    37   0.50 
tr|Q6L569|Q6L569_ORYSJ Putative receptor protein kinase OS=Oryza...    37   0.50 
tr|Q6I660|Q6I660_CITLA Leucine-rich repeat transmembrane protein...    37   0.50 
tr|B8AX82|B8AX82_ORYSI Putative uncharacterized protein OS=Oryza...    37   0.50 
tr|A9TI45|A9TI45_PHYPA Predicted protein OS=Physcomitrella paten...    37   0.50 
tr|A9RKR8|A9RKR8_PHYPA CLL1A clavata1-like receptor S/T protein ...    37   0.50 
tr|A7Q5B4|A7Q5B4_VITVI Chromosome undetermined scaffold_52, whol...    37   0.50 
tr|A5BHP3|A5BHP3_VITVI Putative uncharacterized protein OS=Vitis...    37   0.50 
tr|A3B7B3|A3B7B3_ORYSJ Putative uncharacterized protein OS=Oryza...    37   0.50 

>tr|A9RDS4|A9RDS4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_174077 PE=4 SV=1
          Length = 671

 Score = 41.6 bits (96), Expect = 0.020
 Identities = 17/44 (38%), Positives = 27/44 (61%)
 Frame = +3

Query: 3   LLVFNVSYNHWTGPIPEILTHMSPNNLMNNMDSCGASLPNACPI 134
           L +F+V+YN+ +GP+P  L+      L+ N   CG  L +ACP+
Sbjct: 183 LTLFDVAYNNLSGPVPSSLSRFGAAPLLGNPGLCGFPLASACPV 226


>tr|Q2LJM3|Q2LJM3_MALDO Putative receptor kinase OS=Malus domestica
           GN=DIPM1 PE=2 SV=1
          Length = 666

 Score = 41.2 bits (95), Expect = 0.027
 Identities = 17/42 (40%), Positives = 26/42 (61%)
 Frame = +3

Query: 3   LLVFNVSYNHWTGPIPEILTHMSPNNLMNNMDSCGASLPNAC 128
           LL+FNVS+N+ TGP+P  L+    ++   N   CG ++  AC
Sbjct: 195 LLIFNVSFNNLTGPVPPSLSRFDASSFQLNPGLCGETVNRAC 236


>tr|A7PD42|A7PD42_VITVI Chromosome chr17 scaffold_12, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00016131001
           PE=4 SV=1
          Length = 628

 Score = 40.4 bits (93), Expect = 0.045
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = +3

Query: 12  FNVSYNHWTGPIPEILTHMSPNNLMNNMDSCGASLPNACP 131
           FNVS N+++GPIP++    S ++   N   CG  L N CP
Sbjct: 195 FNVSNNNFSGPIPDVDGRFSASSFSGNPGLCGPPLSNTCP 234


>tr|A7PAW9|A7PAW9_VITVI Chromosome chr16 scaffold_10, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00013855001
           PE=4 SV=1
          Length = 619

 Score = 40.4 bits (93), Expect = 0.045
 Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +3

Query: 3   LLVFNVSYNHWTGPIPE--ILTHMSPNNLMNNMDSCGASLPNACP 131
           L  FNVSYNH  GPIPE  +L     ++  +N   CG  L   CP
Sbjct: 171 LTTFNVSYNHLEGPIPETPVLQRFPESSYDHNSHLCGLPLGKVCP 215


>tr|Q9SCT4|Q9SCT4_ARATH Putative uncharacterized protein T18N14.120
           (At3g51740/T18N14_120) (Putative uncharacterized protein
           At3g51740; T18N14.120) OS=Arabidopsis thaliana
           GN=T18N14.120 PE=2 SV=1
          Length = 836

 Score = 39.7 bits (91), Expect = 0.077
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +3

Query: 12  FNVSYNHWTGPIPEILT-HMSPNNLMNNMDSCGASLPNACP 131
           FNVSYN  +GP+P +L+   + ++ + N+  CG S  N CP
Sbjct: 388 FNVSYNTLSGPVPPVLSKKFNSSSFLGNIQLCGYSSSNPCP 428


>tr|A7PMD4|A7PMD4_VITVI Chromosome chr14 scaffold_21, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020776001
           PE=4 SV=1
          Length = 596

 Score = 39.3 bits (90), Expect = 0.10
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +3

Query: 12  FNVSYNHWTGPIPEILTHMSPNNLMNNMDSCGASLPNACP 131
           F+VS N + GPIP++    + ++ + N   CG  LPN CP
Sbjct: 199 FDVSNNLFRGPIPDVEDRFNESSFLGNPGLCGDPLPNKCP 238


>tr|A8E195|A8E195_TRITU Putative polygalacturonase-inhibiting
           protein 1 OS=Triticum turgidum subsp. durum GN=pgip1
           PE=3 SV=1
          Length = 337

 Score = 38.9 bits (89), Expect = 0.13
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +3

Query: 12  FNVSYNHWTGPIPEILTHMSPNNLMNNMDSCGASLPNAC 128
           FNVSYN   G +P  L  +   N  +N   CGA LP+ C
Sbjct: 297 FNVSYNKLCGQVPAALARLDVYNFQHNKCLCGAPLPDPC 335


>tr|A0AAQ4|A0AAQ4_WHEAT Polygalacturonase inhibiting protein 1
           OS=Triticum aestivum GN=pgip1 PE=3 SV=1
          Length = 337

 Score = 38.9 bits (89), Expect = 0.13
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +3

Query: 12  FNVSYNHWTGPIPEILTHMSPNNLMNNMDSCGASLPNAC 128
           FNVSYN   G +P  L  +   N  +N   CGA LP+ C
Sbjct: 297 FNVSYNKLCGQVPAALARLDVYNFQHNKCLCGAPLPDPC 335


>tr|A5ATC1|A5ATC1_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_043284 PE=4 SV=1
          Length = 1090

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +3

Query: 12  FNVSYNHWTGPIPEILTHMSPNNLMNNMDSCGASLPNACP 131
           F+VS N + GPIP++      ++ + N   CG  LPN CP
Sbjct: 199 FDVSNNLFRGPIPDVEDRFXESSFLGNPGLCGDPLPNKCP 238


>tr|A2WXU9|A2WXU9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_04752 PE=4 SV=1
          Length = 422

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 20/43 (46%), Positives = 24/43 (55%)
 Frame = +3

Query: 3   LLVFNVSYNHWTGPIPEILTHMSPNNLMNNMDSCGASLPNACP 131
           L+ FNV+ N  +GPIP  L   S +N   N   CGA L N CP
Sbjct: 315 LISFNVAENLLSGPIPSSLQKFSASNFAENQGLCGAPLDN-CP 356