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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913152
Clone id YMU001_000027_A11
Library
Length 442
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000027_A11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CATCGTTAGTGTTGGGGAGCACAAACCCGAACGTTTGAGCATTTGGATGCAAGTATTGAG
CAAACAACAGTGTTTTATCGCGGAAACTGCATACACTCCAATGTTTCAGTGCTCTAGCGG
TTCCAGGCAAAAAACTCCAACATTTTTTGCCCCTAGCACTTTGCAGAAAAGAAACCTAGC
GTTAGTTTTTCCAGACCACTAAGCATTTGTACATGCTTGTGTTATTACAGCAGTGGAAAG
GAAAATCTTCTGCATACAGCAGAGTTCCCTCTCCACCCCTATCCCCCTTATTGCCTCCGT
TTTACGTCAGGGTAATAACTTCTTGTGATTAGCTTCAGTTATACAGACTCTTGATGTGTT
TTCAGCTTCGGGTTGAGTTTTCCAAAGTTTAGAGCTGAGGAACACAGGTCTCGTCTTTCC
TTGTACCCCCCTCCATTATCTC
■■Homology search results ■■ -
sp_hit_id Q5RFG8
Definition sp|Q5RFG8|UB2CB_PONAB Ubiquitin-conjugating enzyme E2C-binding protein OS=Pongo abelii
Align length 39
Score (bit) 30.8
E-value 2.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913152|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_A11.
         (442 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5RFG8|UB2CB_PONAB Ubiquitin-conjugating enzyme E2C-binding p...    31   2.6  
sp|Q7Z6J8|UB2CB_HUMAN Ubiquitin-conjugating enzyme E2C-binding p...    31   2.6  
sp|Q04974|TVID_SALTI Vi polysaccharide biosynthesis protein tviD...    31   2.6  

>sp|Q5RFG8|UB2CB_PONAB Ubiquitin-conjugating enzyme E2C-binding
           protein OS=Pongo abelii GN=UBE2CBP PE=2 SV=1
          Length = 389

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 405 VFLSSKLWKTQPEAENTSRVCITEANHKKLLP*RKTEAI 289
           V L + LW+ +PE       C++  NH KL P   T+ I
Sbjct: 170 VNLRTSLWQQRPELSPVEMCCVSSDNHCKLEPKANTKVI 208


>sp|Q7Z6J8|UB2CB_HUMAN Ubiquitin-conjugating enzyme E2C-binding
           protein OS=Homo sapiens GN=UBE2CBP PE=1 SV=2
          Length = 389

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 405 VFLSSKLWKTQPEAENTSRVCITEANHKKLLP*RKTEAI 289
           V L + LW+ +PE       C++  NH KL P   T+ I
Sbjct: 170 VNLRTSLWQQRPELSPVEMCCVSSDNHCKLEPKANTKVI 208


>sp|Q04974|TVID_SALTI Vi polysaccharide biosynthesis protein tviD
           OS=Salmonella typhi GN=tviD PE=4 SV=2
          Length = 831

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 20/64 (31%), Positives = 29/64 (45%)
 Frame = +2

Query: 26  PERLSIWMQVLSKQQCFIAETAYTPMFQCSSGSRQKTPTFFAPSTLQKRNLALVFPDH*A 205
           PE  S W+  LS  Q F    A++  F     S++   TF   +     +LA+ F D   
Sbjct: 422 PETQSGWVNFLSSTQYFNDGNAFSEAFHAGIQSQRLNDTFMETAL----SLAIKFSDELI 477

Query: 206 FVHA 217
           F+HA
Sbjct: 478 FMHA 481
tr_hit_id Q2UH99
Definition tr|Q2UH99|Q2UH99_ASPOR Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes OS=Aspergillus oryzae
Align length 60
Score (bit) 33.1
E-value 7.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913152|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_A11.
         (442 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2UH99|Q2UH99_ASPOR Non-ribosomal peptide synthetase/alpha-am...    33   7.0  
tr|B8N8Z7|B8N8Z7_ASPFL Nonribosomal siderophore peptide synthase...    33   7.0  

>tr|Q2UH99|Q2UH99_ASPOR Non-ribosomal peptide
            synthetase/alpha-aminoadipate reductase and related
            enzymes OS=Aspergillus oryzae GN=AO090023000528 PE=3 SV=1
          Length = 4760

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
 Frame = +1

Query: 148  CP*HFAEKKPSVSFSRPLSICTCLCYYSSGKENLLHT-----AEFPLHPYPPYCLRFTSG 312
            CP  F E + S SFSR    C  +C   SG + L+ T      ++  HP     L FTSG
Sbjct: 2652 CPIVFTETQFSQSFSRVPEGCRVICVDDSGFQELVETMPAEDRDYQSHPDDVAYLLFTSG 2711


>tr|B8N8Z7|B8N8Z7_ASPFL Nonribosomal siderophore peptide synthase SidC
            OS=Aspergillus flavus NRRL3357 GN=AFLA_109430 PE=4 SV=1
          Length = 4760

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
 Frame = +1

Query: 148  CP*HFAEKKPSVSFSRPLSICTCLCYYSSGKENLLHT-----AEFPLHPYPPYCLRFTSG 312
            CP  F E + S SFSR    C  +C   SG + L+ T      ++  HP     L FTSG
Sbjct: 2652 CPIVFTETQFSQSFSRVPEGCRVICVDDSGFQELVETMPAEDRDYQSHPDDVAYLLFTSG 2711