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BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913153|Adiantum capillus-veneris mRNA, clone: YMU001_000027_A12. (442 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RRH2|A9RRH2_PHYPA Transcription elongation factor SPT6 (Fra... 69 2e-10 tr|A9RR56|A9RR56_PHYPA Transcription elongation factor SPT6 (Fra... 52 1e-05 tr|A7PTE3|A7PTE3_VITVI Chromosome chr8 scaffold_29, whole genome... 49 2e-04 tr|Q2HUT6|Q2HUT6_MEDTR SH2 motif; Alcohol dehydrogenase, zinc-co... 46 0.001 tr|A4S671|A4S671_OSTLU Predicted protein OS=Ostreococcus lucimar... 45 0.001 tr|Q3TY72|Q3TY72_MOUSE Putative uncharacterized protein OS=Mus m... 44 0.004 tr|A7E2B4|A7E2B4_HUMAN Suppressor of Ty 6 homolog (S. cerevisiae... 44 0.004 tr|O80815|O80815_ARATH T8F5.22 protein OS=Arabidopsis thaliana G... 42 0.012 tr|A8MS85|A8MS85_ARATH Uncharacterized protein At1g65440.1 OS=Ar... 42 0.012 tr|Q4RRW0|Q4RRW0_TETNG Chromosome 7 SCAF15001, whole genome shot... 42 0.015 tr|Q86L01|Q86L01_DICDI Putative uncharacterized protein OS=Dicty... 40 0.075 tr|Q55A48|Q55A48_DICDI SH2 domain-containing protein OS=Dictyost... 40 0.075 tr|B3S561|B3S561_TRIAD Putative uncharacterized protein OS=Trich... 40 0.075 tr|B7Q0Q9|B7Q0Q9_IXOSC S1 RNA binding domain-containing protein,... 35 1.4 tr|A7SRR7|A7SRR7_NEMVE Predicted protein OS=Nematostella vectens... 35 1.9 tr|Q00XE3|Q00XE3_OSTTA Glycine-rich protein (ISS) OS=Ostreococcu... 34 4.1 tr|B6IUP5|B6IUP5_RHOCS Ribosomal protein S1 OS=Rhodospirillum ce... 33 5.4 tr|A8TND0|A8TND0_9PROT Ribosomal protein S1 OS=alpha proteobacte... 33 5.4
>tr|A9RRH2|A9RRH2_PHYPA Transcription elongation factor SPT6 (Fragment) OS=Physcomitrella patens subsp. patens GN=GTB1501 PE=4 SV=1 Length = 1235
Score = 68.6 bits (166), Expect = 2e-10 Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 1/147 (0%) Frame = -3
Query: 440 YSPPSDDGIFXXXXXXXXXXXGAGRXXXXXXXXVLERGIRCELGNGLTGFIQKDDFSDDA 261 Y+ PS++ F GR V + + C L +GL FIQK+D SDD Sbjct: 904 YAEPSEEEKFYMLSGETEETLSCGRIVNATVRNVQQNRVMCVLESGLLAFIQKEDLSDDR 963
Query: 260 TAD-HQQAPLGMMITCRVKNINKSIIDDSPRIRYYSVDLTFRNSAMRGDDWEKVWSKETF 84 + + G ++TCRVK + ++ + VDLT + S +R + W + + Sbjct: 964 DVEPSDKVSEGSIVTCRVKEV---------KLAKFLVDLTCKGSDLRAEHWRPRVQPDPY 1014
Query: 83 FAXGCLVKSNEQEKATKAKDDEKRKSF 3 + EQ+K K K++EK+K+F Sbjct: 1015 YQPDTTFLQREQDKVRKKKEEEKKKAF 1041
>tr|A9RR56|A9RR56_PHYPA Transcription elongation factor SPT6 (Fragment) OS=Physcomitrella patens subsp. patens GN=GTB1502 PE=4 SV=1 Length = 1249
Score = 52.0 bits (123), Expect = 1e-05 Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 1/147 (0%) Frame = -3
Query: 440 YSPPSDDGIFXXXXXXXXXXXGAGRXXXXXXXXVLERGIRCELGNGLTGFIQKDDFSDDA 261 Y PS + F GR V + + C L +GL GFI K+D SD Sbjct: 921 YLEPSKEECFYLMSGEREETLFPGRIVQATIRKVQDNQVMCVLESGLVGFIYKEDLSDHC 980
Query: 260 TAD-HQQAPLGMMITCRVKNINKSIIDDSPRIRYYSVDLTFRNSAMRGDDWEKVWSKETF 84 A+ ++ G ++TCRVKN+N + + + LT + S R D + + + Sbjct: 981 DAEPKERITEGSLVTCRVKNVN---------MEKFLIYLTCKESDFRRDFYGDLHHDD-- 1029
Query: 83 FAXGCLVKSNEQEKATKAKDDEKRKSF 3 +EQEK K +D+ +K+F Sbjct: 1030 --KPKTTLLSEQEKIRKENEDQHKKTF 1054
>tr|A7PTE3|A7PTE3_VITVI Chromosome chr8 scaffold_29, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023321001 PE=4 SV=1 Length = 1577
Score = 48.5 bits (114), Expect = 2e-04 Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 7/150 (4%) Frame = -3
Query: 440 YSPPSDDGIFXXXXXXXXXXXGAGRXXXXXXXXVLERGIRCELGNGLTGFIQKDDFSDD- 264 Y P+ D F GR V + C L +GLTG + K+D+SDD Sbjct: 980 YEEPTQDEEFYMVTGETEDTLAEGRIVQATIRKVQAQRAICMLESGLTGMLAKEDYSDDW 1039
Query: 263 ------ATADHQQAPLGMMITCRVKNINKSIIDDSPRIRYYSVDLTFRNSAMRGDDWEKV 102 + + H+ G M+TC++K I K+ + V L + S MR + ++ Sbjct: 1040 RDISDLSDSMHE----GDMLTCKIKTIQKN---------RFQVFLVCKESEMRSNRYQNA 1086
Query: 101 WSKETFFAXGCLVKSNEQEKATKAKDDEKR 12 + + ++ +EQEKA K K+ K+ Sbjct: 1087 PNLDPYYREDRSSLQSEQEKARKEKELAKK 1116
>tr|Q2HUT6|Q2HUT6_MEDTR SH2 motif; Alcohol dehydrogenase, zinc-containing; Resolvase, RNase H-like fold; Nucleic acid-binding, OB-fold, subgroup OS=Medicago truncatula GN=MtrDRAFT_AC149050g22v1 PE=4 SV=1 Length = 1640
Score = 45.8 bits (107), Expect = 0.001 Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 3/146 (2%) Frame = -3
Query: 440 YSPPSDDGIFXXXXXXXXXXXGAGRXXXXXXXXVLERGIRCELGNGLTGFIQKDDFSD-- 267 Y PS D F G+ V + C L +G+TG + K+D++D Sbjct: 1107 YEEPSQDEEFYMISGETEETLAEGKIVQVTVRRVQAQKAICGLESGMTGILMKEDYTDDW 1166
Query: 266 -DATADHQQAPLGMMITCRVKNINKSIIDDSPRIRYYSVDLTFRNSAMRGDDWEKVWSKE 90 D + G M+TC++K+I K+ Y V L ++S MR D + + Sbjct: 1167 RDIIELSDRLHEGDMLTCKIKSIQKN---------RYQVFLVCKDSEMRSDRLQNNQDLD 1217
Query: 89 TFFAXGCLVKSNEQEKATKAKDDEKR 12 ++ +EQ+K K K+ K+ Sbjct: 1218 PYYHEDQSCLPSEQDKTRKEKERAKK 1243
>tr|A4S671|A4S671_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=GTB3501 PE=4 SV=1 Length = 1245
Score = 45.4 bits (106), Expect = 0.001 Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 9/119 (7%) Frame = -3
Query: 332 RGIR--CELGNGLTGFIQKDDFSDDATAD--HQQAPLGMMITCRVKNINKSIIDDSPRIR 165 RG R C L +GLTG+++K D SDD + ++ LG +IT RVK D + Sbjct: 922 RGARAVCTLDSGLTGYVEKYDVSDDQSFSRIEEKVALGQVITARVK-------PDGVDVH 974
Query: 164 YYSVDLTFRNSAMRGDD---WEKVWSKETFFAXGCLVK--SNEQEKATKAKDDEKRKSF 3 +SV L +SA+ D+ WE+ +VK + K K+K D ++++F Sbjct: 975 NFSVQLACSSSALHPDETLQWEQHLHYTEANGYYSMVKQPGEVRLKKQKSKKDMQKRTF 1033
>tr|Q3TY72|Q3TY72_MOUSE Putative uncharacterized protein OS=Mus musculus GN=Supt6h PE=2 SV=1 Length = 658
Score = 43.9 bits (102), Expect = 0.004 Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 3/104 (2%) Frame = -3
Query: 329 GIRCELGNGLTGFIQKDDFSDDAT-ADHQQAPLGMMITCRVKNINKSIIDDSPRIRYYSV 153 G++ L NG+TGFI SD ++ +GM + CR+ I+ I +S Sbjct: 159 GVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGMTVHCRIMKID---------IEKFSA 209
Query: 152 DLTFRNSAM--RGDDWEKVWSKETFFAXGCLVKSNEQEKATKAK 27 DLT R S + R ++W+ K+T++ ++QE+ K K Sbjct: 210 DLTCRTSDLMDRNNEWK--LPKDTYYDFDAEAADHKQEEDMKRK 251
>tr|A7E2B4|A7E2B4_HUMAN Suppressor of Ty 6 homolog (S. cerevisiae) OS=Homo sapiens GN=SUPT6H PE=2 SV=1 Length = 1726
Score = 43.9 bits (102), Expect = 0.004 Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 3/104 (2%) Frame = -3
Query: 329 GIRCELGNGLTGFIQKDDFSDDAT-ADHQQAPLGMMITCRVKNINKSIIDDSPRIRYYSV 153 G++ L NG+TGFI SD ++ +GM + CR+ I+ I +S Sbjct: 1227 GVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGMTVHCRIMKID---------IEKFSA 1277
Query: 152 DLTFRNSAM--RGDDWEKVWSKETFFAXGCLVKSNEQEKATKAK 27 DLT R S + R ++W+ K+T++ ++QE+ K K Sbjct: 1278 DLTCRTSDLMDRNNEWK--LPKDTYYDFDAEAADHKQEEDMKRK 1319
>tr|O80815|O80815_ARATH T8F5.22 protein OS=Arabidopsis thaliana GN=T8F5.22 PE=4 SV=1 Length = 1684
Score = 42.4 bits (98), Expect = 0.012 Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 5/104 (4%) Frame = -3
Query: 320 CELGNGLTGFIQKDDFSDDA-----TADHQQAPLGMMITCRVKNINKSIIDDSPRIRYYS 156 C L +GLTG + K+DFSDD AD Q G ++TC++K+I K + Y Sbjct: 1157 CVLDSGLTGMLMKEDFSDDGRDIVDLAD--QLKEGDILTCKIKSIQK---------QRYQ 1205
Query: 155 VDLTFRNSAMRGDDWEKVWSKETFFAXGCLVKSNEQEKATKAKD 24 V L + S MR + + + + ++ +EKA K K+ Sbjct: 1206 VFLICKESEMRNNRHQHNQNVDAYYHEDRNSLQLVKEKARKEKE 1249
>tr|A8MS85|A8MS85_ARATH Uncharacterized protein At1g65440.1 OS=Arabidopsis thaliana GN=At1g65440 PE=4 SV=1 Length = 1647
Score = 42.4 bits (98), Expect = 0.012 Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 5/104 (4%) Frame = -3
Query: 320 CELGNGLTGFIQKDDFSDDA-----TADHQQAPLGMMITCRVKNINKSIIDDSPRIRYYS 156 C L +GLTG + K+DFSDD AD Q G ++TC++K+I K + Y Sbjct: 1120 CVLDSGLTGMLMKEDFSDDGRDIVDLAD--QLKEGDILTCKIKSIQK---------QRYQ 1168
Query: 155 VDLTFRNSAMRGDDWEKVWSKETFFAXGCLVKSNEQEKATKAKD 24 V L + S MR + + + + ++ +EKA K K+ Sbjct: 1169 VFLICKESEMRNNRHQHNQNVDAYYHEDRNSLQLVKEKARKEKE 1212
>tr|Q4RRW0|Q4RRW0_TETNG Chromosome 7 SCAF15001, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00029979001 PE=4 SV=1 Length = 1671
Score = 42.0 bits (97), Expect = 0.015 Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 1/108 (0%) Frame = -3
Query: 329 GIRCELGNGLTGFIQKDDFSDDATA-DHQQAPLGMMITCRVKNINKSIIDDSPRIRYYSV 153 G+R L NG+ GFI SD ++ +GM + CR+ I+ I +SV Sbjct: 1071 GVRSRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKID---------IEKFSV 1121
Query: 152 DLTFRNSAMRGDDWEKVWSKETFFAXGCLVKSNEQEKATKAKDDEKRK 9 DLT R S + E K++++ + +Q++ K K R+ Sbjct: 1122 DLTCRTSDLMDKANEWKLPKDSYYDFDTESEDQKQDEELKKKQQRTRQ 1169
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