BP913160
Clone id YMU001_000027_B07
Library
Length 470
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000027_B07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TACATGAAATCTGGCGCAGATTATGGAAAATATCAAACAAGATACATTAGTAGAGACTGA
AGCTGAAGAACGGGCATAAACCACAGATAGCCTCTTGGGTCCCGTGTTTTCTTGCTGTAA
TTTTAATGGCTTGACATTGGTCCAACTATTGGTTTAACAGTAACAGCAAAGCCACAATTA
CCTTCCTAGCACGGACCAAGTTTGTACATTGTCTAATCATTCATCTACAATCTCAAAACT
TTTAGGTCAACAAAGGTAGCCTAACCAGCCCATGAATGTAATTAAGCCAGCTCACATTTA
TGCATAATTTTCTTGTCCATTGCCCTGACCTGCAATGGCACACGGATTCGAATAAGAGCA
AAACCAGAAACAAGTGACTTCTGACTAAAGACATGGGAAGAGAAACTACTCACTCTACTC
GTCCGGTTTCACATAAAAGAAGCAGTACCACATCATTCGCGGCCGCGAAT
■■Homology search results ■■ -
sp_hit_id A7N6S2
Definition sp|A7N6S2|CQSS_VIBHB CAI-1 autoinducer sensor kinase/phosphatase cqsS OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120)
Align length 48
Score (bit) 32.7
E-value 0.74
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913160|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_B07.
(454 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A7N6S2|CQSS_VIBHB CAI-1 autoinducer sensor kinase/phosphatase... 33 0.74
sp|Q12180|HAL9_YEAST Halotolerance protein 9 OS=Saccharomyces ce... 30 3.8

>sp|A7N6S2|CQSS_VIBHB CAI-1 autoinducer sensor kinase/phosphatase
cqsS OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120)
GN=cqsS PE=1 SV=1
Length = 681

Score = 32.7 bits (73), Expect = 0.74
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3

Query: 99 VPCFLAVILMA*HWSNYWFNSNSKATITFLARTKFVHCLIIHLQSQNF 242
+PCF +L+ +WSN W S A F+H L++H+ S F
Sbjct: 83 LPCFFFYMLLMNNWSNVWVMSFMSAI--------FLHILLVHITSVMF 122


>sp|Q12180|HAL9_YEAST Halotolerance protein 9 OS=Saccharomyces
cerevisiae GN=HAL9 PE=1 SV=1
Length = 1030

Score = 30.4 bits (67), Expect = 3.8
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2

Query: 182 LPSTDQVCTLSNHSSTISKLLGQQR*PNQPMNVIKPAHIYA 304
+P DQ+ T+ N +T+ + G PN PMNV P IY+
Sbjct: 55 MPVPDQLMTMPNRENTL--MTGSTIGPNIPMNVAYPNTIYS 93


tr_hit_id A6AL88
Definition tr|A6AL88|A6AL88_VIBHA CqsS OS=Vibrio harveyi HY01
Align length 48
Score (bit) 32.7
E-value 9.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913160|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_B07.
(454 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A6AL88|A6AL88_VIBHA CqsS OS=Vibrio harveyi HY01 GN=A1Q_0995 P... 33 9.3

>tr|A6AL88|A6AL88_VIBHA CqsS OS=Vibrio harveyi HY01 GN=A1Q_0995 PE=4
SV=1
Length = 661

Score = 32.7 bits (73), Expect = 9.3
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3

Query: 99 VPCFLAVILMA*HWSNYWFNSNSKATITFLARTKFVHCLIIHLQSQNF 242
+PCF +L+ +WSN W S A F+H L++H+ S F
Sbjct: 63 LPCFFFYMLLMNNWSNVWVMSFMSAI--------FLHILLVHITSVMF 102