BP913162 |
Clone id |
YMU001_000027_B09 |
Library |
YMU01 |
Length |
596 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000027_B09. |
Accession |
BP913162 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTGGAAGCTTAAGCATTAGCATCTCTGCCATTTGCAAAGCAATGAGCAGGATGGATGAGT CCTTCAAAGCCAAGACTCCAGCAAGGAAACTGGAAATGTTCAGATCTTTGAATAAAGAAC GCAACATGTCAGCTGTACTAAAATGAATAAGCTTGCTCATTGAAGCCAGGCACTTATGTC GAATGGGTGGATTTACACTTGACCCATAGACCTGAATTAAAACCGGGAACAAGTCTTTTC CAAACTGAGCCAACAGATTGGGGCGATCCTGCAGTAATTTTTCTCTCAAAGACACATCAT CAGATTTTGTGGATGACCCCTTCCTTGCCGAATTGCTCCGTGAAATGGTCACACCATTTA GCGGCATGATGAGTTGAGGCATAGGGGGTAGTAGTTCATTCACAAGGGTGACAATTTCAT ACAGCTGATCTGGAGACCTAGCAGCAGAAAGAGGAGAAACCGTGCTACTGCACAAAACTC CAGATCCAGCCAGGATGTCCTTAATGGTCGAACTAATGTTCAGTAAAGGTAGACTCTCTG CAGCAGCTGCGGAGCCACTTGCACATGTCGACAACAGCCGGATTAAACCCGTGTAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6WWW4 |
Definition |
sp|Q6WWW4|UPL3_ARATH E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana |
Align length |
202 |
Score (bit) |
182.0 |
E-value |
1.0e-45 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7P8B0 |
Definition |
tr|A7P8B0|A7P8B0_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
203 |
Score (bit) |
192.0 |
E-value |
2.0e-47 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913162|Adiantum capillus-veneris mRNA, clone: YMU001_000027_B09. (583 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7P8B0|A7P8B0_VITVI Chromosome chr3 scaffold_8, whole genome ... 192 2e-47 tr|B3H700|B3H700_ARATH Uncharacterized protein At4g38600.2 OS=Ar... 182 1e-44 tr|Q6YU89|Q6YU89_ORYSJ Putative HECT ubiquitin-protein ligase 3 ... 181 2e-44 tr|A3A253|A3A253_ORYSJ Putative uncharacterized protein OS=Oryza... 181 2e-44 tr|A2WZR6|A2WZR6_ORYSI Putative uncharacterized protein OS=Oryza... 181 2e-44 tr|A7QDT6|A7QDT6_VITVI Chromosome chr4 scaffold_83, whole genome... 162 2e-38 tr|A5BSJ2|A5BSJ2_VITVI Putative uncharacterized protein OS=Vitis... 113 7e-24 tr|B2RFH6|B2RFH6_BACTU Putative hect E3 ubiquitin ligase (Fragme... 107 4e-22 tr|A7PSS1|A7PSS1_VITVI Chromosome chr8 scaffold_29, whole genome... 102 1e-20 tr|A5B6G4|A5B6G4_VITVI Putative uncharacterized protein OS=Vitis... 99 2e-19 tr|B6MBM5|B6MBM5_BRAFL Putative uncharacterized protein OS=Branc... 90 1e-16 tr|Q53R87|Q53R87_HUMAN Putative uncharacterized protein TRIP12 (... 85 3e-15 tr|Q14CF1|Q14CF1_HUMAN TRIP12 protein OS=Homo sapiens GN=TRIP12 ... 85 3e-15 tr|Q14CA3|Q14CA3_HUMAN TRIP12 protein OS=Homo sapiens GN=TRIP12 ... 85 3e-15 tr|Q8K051|Q8K051_MOUSE Trip12 protein (Fragment) OS=Mus musculus... 84 4e-15 tr|Q3TY88|Q3TY88_MOUSE Putative uncharacterized protein (Fragmen... 84 4e-15 tr|Q497C1|Q497C1_RAT Thyroid hormone receptor interactor 12 OS=R... 84 8e-15 tr|Q6NTJ4|Q6NTJ4_XENLA MGC83258 protein OS=Xenopus laevis GN=MGC... 83 1e-14 tr|B4F6W9|B4F6W9_XENTR Putative uncharacterized protein OS=Xenop... 83 1e-14 tr|B2GUA6|B2GUA6_XENTR LOC100158539 protein (Fragment) OS=Xenopu... 83 1e-14 tr|Q295Y5|Q295Y5_DROPS GA14632 OS=Drosophila pseudoobscura pseud... 83 1e-14 tr|B4GFI8|B4GFI8_DROPE GL22220 OS=Drosophila persimilis GN=GL222... 83 1e-14 tr|Q54KP2|Q54KP2_DICDI Ubiquitin-protein ligase (HECT) domain-co... 80 1e-13 tr|Q7PUQ4|Q7PUQ4_ANOGA AGAP001296-PA (Fragment) OS=Anopheles gam... 79 2e-13 tr|B4NJR1|B4NJR1_DROWI GK14424 OS=Drosophila willistoni GN=GK144... 79 2e-13 tr|A3KPN5|A3KPN5_DANRE Novel protein similar to vertebrate thyro... 77 5e-13 tr|B6M777|B6M777_BRAFL Putative uncharacterized protein OS=Branc... 77 5e-13 tr|B4JSU9|B4JSU9_DROGR GH17429 OS=Drosophila grimshawi GN=GH1742... 77 7e-13 tr|Q9VN58|Q9VN58_DROME CG17735 OS=Drosophila melanogaster GN=CG1... 77 9e-13 tr|B4I3T0|B4I3T0_DROSE GM10679 OS=Drosophila sechellia GN=GM1067... 77 9e-13
>tr|A7P8B0|A7P8B0_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036113001 PE=4 SV=1 Length = 657
Score = 192 bits (487), Expect = 2e-47 Identities = 109/203 (53%), Positives = 140/203 (68%), Gaps = 9/203 (4%) Frame = -2
Query: 582 YTGLIRLLSTCASGSAAAAESLPLLNISSTIKDILAGSGVLCSSTVSPLSAARSPDQLYE 403 YTGLIRLLSTCASGS A++L LL IS +KDIL+GSG++ S +VSP + +R P+Q++E Sbjct: 422 YTGLIRLLSTCASGSPLGAKTLLLLGISGILKDILSGSGLVASISVSP-AISRPPEQIFE 480
Query: 402 IVTLVNEXXXXXXXXXXXL--------NGVTISRSNSARKGSSTK-SDDVSLREKLLQDR 250 IV L NE L G + ++ S+ G + +VS REKLL D+ Sbjct: 481 IVNLANELLPPLPEGIISLPASSNLLVKGTLVKKAPSSSSGKQEDVNGNVSAREKLLNDQ 540
Query: 249 PNLLAQFGKDLFPVLIQVYGSSVNPPIRHKCLASMSKLIHFSTADMLRSLFKDLNISSFL 70 P LL QFG DL PVLIQ+YGSSVN P+RHKCL+ + KL++FSTADM++SL NISSFL Sbjct: 541 PELLQQFGMDLLPVLIQIYGSSVNGPVRHKCLSVIGKLMYFSTADMIQSLISVTNISSFL 600
Query: 69 AGVLALKDSSILLIALQMAEMLM 1 AGVLA KD +L+ ALQ+AE+LM Sbjct: 601 AGVLAWKDPQVLVPALQIAEILM 623
>tr|B3H700|B3H700_ARATH Uncharacterized protein At4g38600.2 OS=Arabidopsis thaliana GN=At4g38600 PE=4 SV=1 Length = 1794
Score = 182 bits (462), Expect = 1e-44 Identities = 109/202 (53%), Positives = 139/202 (68%), Gaps = 8/202 (3%) Frame = -2
Query: 582 YTGLIRLLSTCASGSAAAAESLPLLNISSTIKDILAGSGVLCSSTVSPLSAARSPDQLYE 403 YTGLIRLLSTCASGS +L LL ISS +KDIL GSGV +++VSP + +R DQ+YE Sbjct: 359 YTGLIRLLSTCASGSPLGFRTLLLLGISSILKDILLGSGVSANASVSP-ALSRPADQIYE 417
Query: 402 IVTLVNEXXXXXXXXXXXLNGVT--ISRSNSARKGS---STKSDDV---SLREKLLQDRP 247 IV L NE L T + + + +K S S K +D+ S REKLL D+P Sbjct: 418 IVNLANELLPPLPEGVISLPTSTNALVKGSCQKKSSPSTSGKQEDILKISPREKLLGDQP 477
Query: 246 NLLAQFGKDLFPVLIQVYGSSVNPPIRHKCLASMSKLIHFSTADMLRSLFKDLNISSFLA 67 LL QFG DL PVL+Q+YGSSVN IRHKCL+ + KL++FS+++M++SL D NISSFLA Sbjct: 478 ELLQQFGLDLLPVLVQIYGSSVNGTIRHKCLSVIGKLMYFSSSEMIQSLIGDTNISSFLA 537
Query: 66 GVLALKDSSILLIALQMAEMLM 1 GVLA KD +L+ ALQ+AE+LM Sbjct: 538 GVLAWKDPQVLVPALQVAEILM 559
>tr|Q6YU89|Q6YU89_ORYSJ Putative HECT ubiquitin-protein ligase 3 OS=Oryza sativa subsp. japonica GN=B1370C05.20 PE=4 SV=1 Length = 1781
Score = 181 bits (460), Expect = 2e-44 Identities = 100/203 (49%), Positives = 142/203 (69%), Gaps = 9/203 (4%) Frame = -2
Query: 582 YTGLIRLLSTCASGSAAAAESLPLLNISSTIKDILAGSGVLCSSTVSPLSAARSPDQLYE 403 YTGLIRLLSTCASGS AA++L LL IS T+KDIL+GSG++ ++VSP + +R +Q++E Sbjct: 327 YTGLIRLLSTCASGSLLAAKTLLLLGISGTLKDILSGSGLVAGASVSP-ALSRPAEQMFE 385
Query: 402 IVTLVNEXXXXXXXXXXXLNGV--TISRSNSARKGSSTKSDDVSL-------REKLLQDR 250 IV+L ++ L + + +S++K +STK D S E+LL++ Sbjct: 386 IVSLADDLLPHLPSGIISLPAYFHVLVKGSSSKKSASTKQDGTSSTENERSGHERLLREH 445
Query: 249 PNLLAQFGKDLFPVLIQVYGSSVNPPIRHKCLASMSKLIHFSTADMLRSLFKDLNISSFL 70 P LL QFG DL P++ QVYGSSVN PIRHKCL+ + KL+++S+A+M++SL NISSFL Sbjct: 446 PELLKQFGMDLLPIMTQVYGSSVNAPIRHKCLSIIGKLMYYSSAEMIQSLLGTTNISSFL 505
Query: 69 AGVLALKDSSILLIALQMAEMLM 1 AG+LA KD +L+ ALQ+AE++M Sbjct: 506 AGILAWKDPQVLIPALQIAEIMM 528
>tr|A3A253|A3A253_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_004875 PE=4 SV=1 Length = 1682
Score = 181 bits (460), Expect = 2e-44 Identities = 100/203 (49%), Positives = 142/203 (69%), Gaps = 9/203 (4%) Frame = -2
Query: 582 YTGLIRLLSTCASGSAAAAESLPLLNISSTIKDILAGSGVLCSSTVSPLSAARSPDQLYE 403 YTGLIRLLSTCASGS AA++L LL IS T+KDIL+GSG++ ++VSP + +R +Q++E Sbjct: 222 YTGLIRLLSTCASGSLLAAKTLLLLGISGTLKDILSGSGLVAGASVSP-ALSRPAEQMFE 280
Query: 402 IVTLVNEXXXXXXXXXXXLNGV--TISRSNSARKGSSTKSDDVSL-------REKLLQDR 250 IV+L ++ L + + +S++K +STK D S E+LL++ Sbjct: 281 IVSLADDLLPHLPSGIISLPAYFHVLVKGSSSKKSASTKQDGTSSTENERSGHERLLREH 340
Query: 249 PNLLAQFGKDLFPVLIQVYGSSVNPPIRHKCLASMSKLIHFSTADMLRSLFKDLNISSFL 70 P LL QFG DL P++ QVYGSSVN PIRHKCL+ + KL+++S+A+M++SL NISSFL Sbjct: 341 PELLKQFGMDLLPIMTQVYGSSVNAPIRHKCLSIIGKLMYYSSAEMIQSLLGTTNISSFL 400
Query: 69 AGVLALKDSSILLIALQMAEMLM 1 AG+LA KD +L+ ALQ+AE++M Sbjct: 401 AGILAWKDPQVLIPALQIAEIMM 423
>tr|A2WZR6|A2WZR6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05457 PE=4 SV=1 Length = 1682
Score = 181 bits (460), Expect = 2e-44 Identities = 100/203 (49%), Positives = 142/203 (69%), Gaps = 9/203 (4%) Frame = -2
Query: 582 YTGLIRLLSTCASGSAAAAESLPLLNISSTIKDILAGSGVLCSSTVSPLSAARSPDQLYE 403 YTGLIRLLSTCASGS AA++L LL IS T+KDIL+GSG++ ++VSP + +R +Q++E Sbjct: 222 YTGLIRLLSTCASGSLLAAKTLLLLGISGTLKDILSGSGLVAGASVSP-ALSRPAEQMFE 280
Query: 402 IVTLVNEXXXXXXXXXXXLNGV--TISRSNSARKGSSTKSDDVSL-------REKLLQDR 250 IV+L ++ L + + +S++K +STK D S E+LL++ Sbjct: 281 IVSLADDLLPHLPSGIISLPAYFHVLVKGSSSKKSASTKQDGTSSTENERSGHERLLREH 340
Query: 249 PNLLAQFGKDLFPVLIQVYGSSVNPPIRHKCLASMSKLIHFSTADMLRSLFKDLNISSFL 70 P LL QFG DL P++ QVYGSSVN PIRHKCL+ + KL+++S+A+M++SL NISSFL Sbjct: 341 PELLKQFGMDLLPIMTQVYGSSVNAPIRHKCLSIIGKLMYYSSAEMIQSLLGTTNISSFL 400
Query: 69 AGVLALKDSSILLIALQMAEMLM 1 AG+LA KD +L+ ALQ+AE++M Sbjct: 401 AGILAWKDPQVLIPALQIAEIMM 423
>tr|A7QDT6|A7QDT6_VITVI Chromosome chr4 scaffold_83, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036737001 PE=4 SV=1 Length = 1693
Score = 162 bits (409), Expect = 2e-38 Identities = 99/206 (48%), Positives = 126/206 (61%), Gaps = 12/206 (5%) Frame = -2
Query: 582 YTGLIRLLSTCASGSAAAAESLPLLNISSTIKDILAGSGVLCSSTVSPLSAARSPDQLYE 403 YTGLIRLLS CA GS A++L L IS +KDIL S ++ S +V P S R PDQ++E Sbjct: 344 YTGLIRLLSICAKGSPLGAKTLLHLEISGILKDILPVSSLIGSVSVPP-SLTRPPDQIFE 402
Query: 402 IVTLVNEXXXXXXXXXXXLNGVTI--SRSNSARKGSSTKSD----------DVSLREKLL 259 IV L +E + RS++ K S+ S + S REKLL Sbjct: 403 IVNLADELLPPLPEGTISHLNYSSFQMRSSAGEKSPSSGSGKEEITNGSMPEASAREKLL 462
Query: 258 QDRPNLLAQFGKDLFPVLIQVYGSSVNPPIRHKCLASMSKLIHFSTADMLRSLFKDLNIS 79 D+P L QFG DL PVL+QVYGS+VN +R+KCL+ + KL++F TADM+ SL NIS Sbjct: 463 CDQPKFLQQFGVDLLPVLVQVYGSTVNVQVRNKCLSVIGKLMYFCTADMILSLLNSTNIS 522
Query: 78 SFLAGVLALKDSSILLIALQMAEMLM 1 SFLAGVLA KD +L+ LQMAE+LM Sbjct: 523 SFLAGVLASKDPQVLIPGLQMAEILM 548
>tr|A5BSJ2|A5BSJ2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008284 PE=4 SV=1 Length = 225
Score = 113 bits (283), Expect = 7e-24 Identities = 73/156 (46%), Positives = 95/156 (60%), Gaps = 15/156 (9%) Frame = -2
Query: 582 YTGLIRLLSTCASGSAAAAESLPLLNISSTIKDILAGSGVLCSSTVSPLSAARSPDQLYE 403 YTGL+RLLST ASGS A++L LL IS +KDIL+G G++ S +VSP + +R P+Q++E Sbjct: 66 YTGLVRLLSTYASGSPLGAKTLLLLGISGILKDILSGFGLVASISVSP-AISRLPEQIFE 124
Query: 402 IVTLVNEXXXXXXXXXXXL--------NGVTISRSNSARKGSSTKSDDV-------SLRE 268 I+ LVNE L G + +S ++ SS K +DV S RE Sbjct: 125 IINLVNELLPLLPEGIIFLPASSNFLVKGTLVKKSPTS---SSLKQEDVNGNVPEVSARE 181
Query: 267 KLLQDRPNLLAQFGKDLFPVLIQVYGSSVNPPIRHK 160 KLL D+ LL QF DL PVLIQ+YGSSVN P+R K Sbjct: 182 KLLNDQLELLQQFEMDLLPVLIQIYGSSVNGPVRQK 217
>tr|B2RFH6|B2RFH6_BACTU Putative hect E3 ubiquitin ligase (Fragment) OS=Bacillus thuringiensis GN=Zm-upl PE=4 SV=1 Length = 576
Score = 107 bits (268), Expect = 4e-22 Identities = 53/105 (50%), Positives = 80/105 (76%), Gaps = 1/105 (0%) Frame = -2
Query: 312 RKGSSTKSDDVSLREKLLQDRPNLLAQFGKDLFPVLIQVYGSSVNPPIRHKCLASMSKLI 133 ++G + ++ S RE+LL+++P LL QFG DL P + QVYGSSVN PIRHKCL+ + KL+ Sbjct: 41 QEGGGSTGNERSGRERLLREQPELLQQFGMDLLPTMTQVYGSSVNAPIRHKCLSIIGKLM 100
Query: 132 HFSTADMLRSLFK-DLNISSFLAGVLALKDSSILLIALQMAEMLM 1 ++S+A+ ++SL ++I SFLAG+LA KD +L+ ALQ+AE++M Sbjct: 101 YYSSAETIQSLLSYFISICSFLAGILAWKDPQVLIPALQIAEIMM 145
>tr|A7PSS1|A7PSS1_VITVI Chromosome chr8 scaffold_29, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023060001 PE=4 SV=1 Length = 791
Score = 102 bits (255), Expect = 1e-20 Identities = 71/197 (36%), Positives = 104/197 (52%), Gaps = 3/197 (1%) Frame = -2
Query: 582 YTGLIRLLSTCASGSAAAAESLPLLNISSTIKDILAGSGVLCSSTVSPLSAARSPDQLYE 403 YTGLI L ASGS A +L LNISS +KDIL+ L S +Q+ E Sbjct: 351 YTGLIGSLVKLASGSVVAVRTLFELNISSILKDILSTYD-LSHGIPSVNMVDGHCNQVCE 409
Query: 402 IVTLVNEXXXXXXXXXXXLNGVTISRSNSARKGSSTKSDDVSL---REKLLQDRPNLLAQ 232 ++ L+N A +S + DV + +E L ++P+LL + Sbjct: 410 VLKLLN-----------------------ALLPTSARDQDVQMVLDKESFLANQPDLLQK 446
Query: 231 FGKDLFPVLIQVYGSSVNPPIRHKCLASMSKLIHFSTADMLRSLFKDLNISSFLAGVLAL 52 FG D+ P+L+QV S N + + CL+ ++KL++FS +D L L + NISSFLAGV Sbjct: 447 FGNDILPILMQVVSSGANLYVCYGCLSIINKLVYFSKSDNLLELLNNTNISSFLAGVFTR 506
Query: 51 KDSSILLIALQMAEMLM 1 K+ +L+IALQ+ E L+ Sbjct: 507 KEHHVLIIALQIVETLL 523
>tr|A5B6G4|A5B6G4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039706 PE=4 SV=1 Length = 1751
Score = 99.0 bits (245), Expect = 2e-19 Identities = 49/78 (62%), Positives = 61/78 (78%) Frame = -2
Query: 234 QFGKDLFPVLIQVYGSSVNPPIRHKCLASMSKLIHFSTADMLRSLFKDLNISSFLAGVLA 55 QFG DL PVL+QVYGS+VN +R+KCL+ + KL++F TADM+ SL NISSFLAGVLA Sbjct: 474 QFGVDLLPVLVQVYGSTVNVQVRNKCLSVIGKLMYFCTADMILSLLNSTNISSFLAGVLA 533
Query: 54 LKDSSILLIALQMAEMLM 1 KD +L+ LQMAE+LM Sbjct: 534 SKDPQVLIPGLQMAEILM 551
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