BP913167 |
Clone id |
YMU001_000027_C04 |
Library |
YMU01 |
Length |
566 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000027_C04. |
Accession |
BP913167 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1125Contig1 |
Sequence |
CACAGAGGCTCTTCACTGGAAAGAGATGTATCTTCTACTGCCCTTTTTACAGGCAAGACA AATCCATTTAACTTGGACTGAACCACTTTTTGCTGCAAGGTGGCAGCCTTCTGCTTCTGA TTCAGTTTACAATCTGTTTTTTCATCCTTCTCTGTGCTTATGGAGCCACCTTTTGAATTT GTTGATACAATGGAAACACCACATTGAAACGAATCAAGTACAGCAGGAGCTGCACTGCAA GTAGTGGATTTCTTATATGAAGAATCATCCAAATTTTCTTCCACCACAACCTCTTTTAAA AAGATGGGATCCTCATTCTTATTTTCTGATAGCTCTACCTGAATAGACCCAGTCCTTTGA GATAACTCTTCAAAATCACACCGTTGGGTCTCAAACTCTGGTAATTCTCTGAGCATACAA CTATCTTTTTCAAAACTTGTATTTTCAAGTTTCTGTACTGCAAAAGCATACCTCTCAGGT GCATACACGCTTTCTAATGACTGTCTAAATGCCTGTAAAAGCTCACTCTCTGCATGAAGA AAGACCTTGCGCTTATCTGGTGTTAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P49454 |
Definition |
sp|P49454|CENPF_HUMAN Centromere protein F OS=Homo sapiens |
Align length |
112 |
Score (bit) |
36.6 |
E-value |
0.082 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9U3N6 |
Definition |
tr|A9U3N6|A9U3N6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
79 |
Score (bit) |
45.8 |
E-value |
0.001 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913167|Adiantum capillus-veneris mRNA, clone: YMU001_000027_C04. (548 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9U3N6|A9U3N6_PHYPA Predicted protein OS=Physcomitrella paten... 46 0.001 tr|A7THU9|A7THU9_VANPO Putative uncharacterized protein OS=Vande... 43 0.009 tr|A4RZC5|A4RZC5_OSTLU Predicted protein (Fragment) OS=Ostreococ... 38 0.40 tr|Q0F8L6|Q0F8L6_9RHOB Possible peptidoglycan binding protein OS... 37 0.89 tr|A6DHB7|A6DHB7_9BACT Putative uncharacterized protein OS=Lenti... 37 0.89 tr|Q6CRP2|Q6CRP2_KLULA KLLA0D07502p OS=Kluyveromyces lactis GN=K... 37 0.89 tr|Q9VGW4|Q9VGW4_DROME CG14692 OS=Drosophila melanogaster GN=CG1... 36 1.2 tr|A7TUG6|A7TUG6_RANCA Larval type I keratin OS=Rana catesbeiana... 35 2.0 tr|B6WQV3|B6WQV3_9DELT Putative uncharacterized protein OS=Desul... 35 2.0 tr|A7Q0A6|A7Q0A6_VITVI Chromosome chr7 scaffold_42, whole genome... 35 2.0 tr|A2DDP2|A2DDP2_TRIVA Viral A-type inclusion protein, putative ... 35 2.0 tr|Q4HMX7|Q4HMX7_CAMLA Uroporphyrinogen-III synthase OS=Campylob... 35 2.6 tr|Q8JMP5|Q8JMP5_SFV Structural polyprotein OS=Semliki forest vi... 34 4.4 tr|A9BD99|A9BD99_PROM4 Trigger factor OS=Prochlorococcus marinus... 34 4.4 tr|B7IIC2|B7IIC2_BACCE Putative uncharacterized protein OS=Bacil... 34 4.4 tr|Q69L72|Q69L72_ORYSJ Os02g0592300 protein OS=Oryza sativa subs... 34 4.4 tr|B8AEQ2|B8AEQ2_ORYSI Putative uncharacterized protein OS=Oryza... 34 4.4 tr|A5APC0|A5APC0_VITVI Putative uncharacterized protein OS=Vitis... 34 4.4 tr|A3A8J8|A3A8J8_ORYSJ Putative uncharacterized protein OS=Oryza... 34 4.4 tr|Q23DH8|Q23DH8_TETTH DNA-directed RNA polymerase, omega subuni... 34 4.4 tr|A9V5A9|A9V5A9_MONBE Predicted protein OS=Monosiga brevicollis... 34 4.4 tr|Q87049|Q87049_SFV Virion protein OS=Semliki forest virus GN=C... 34 5.8 tr|Q809B6|Q809B6_SFV Structural polyprotein OS=Semliki forest vi... 34 5.8 tr|Q4KJM1|Q4KJM1_PSEF5 Methyl-accepting chemotaxis transducer OS... 34 5.8 tr|A0D410|A0D410_PARTE Chromosome undetermined scaffold_37, whol... 34 5.8 tr|Q466U9|Q466U9_METBF Putative uncharacterized protein OS=Metha... 34 5.8 tr|Q72B32|Q72B32_DESVH Magnesium transporter OS=Desulfovibrio vu... 33 7.5 tr|A1VD56|A1VD56_DESVV Magnesium transporter OS=Desulfovibrio vu... 33 7.5 tr|A0AJT0|A0AJT0_LISW6 CoaBC protein OS=Listeria welshimeri sero... 33 7.5 tr|Q016H6|Q016H6_OSTTA Putative PMS2 postmeiotic segregation inc... 33 7.5
>tr|A9U3N6|A9U3N6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_155569 PE=4 SV=1 Length = 742
Score = 45.8 bits (107), Expect = 0.001 Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 9/79 (11%) Frame = -1
Query: 548 KVFLHAESELLQAFRQSLESVYAPERYAFAVQKLENTS---------FEKDSCMLRELPE 396 KVFLH ES LL A +++LE VY P++Y + V + + + ++ L + + Sbjct: 311 KVFLHTESALLTALKEALECVYTPDKYTYTVNNFADKATSSQHGVSIVDFETQPLSPIGQ 370
Query: 395 FETQRCDFEELSQRTGSIQ 339 + + DFE L ++T + + Sbjct: 371 LDPEEDDFENLEEKTATAE 389
>tr|A7THU9|A7THU9_VANPO Putative uncharacterized protein OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=Kpol_1031p15 PE=4 SV=1 Length = 929
Score = 43.1 bits (100), Expect = 0.009 Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 12/132 (9%) Frame = -1
Query: 383 RCDFEELSQRTGSIQVELSENKNEDPIFLKEV-VVEENLDDSSYKKSTTCSAAPAVLDSF 207 R DFE + + ++ +LS+ NE+ +F ++ + LDD+ ++ +D Sbjct: 391 RKDFERMRENNANLDSKLSQISNENKLFRDKISKLSNQLDDTKRERDNQVELMKRRID-- 448
Query: 206 QCGVSIVSTNSKGGSISTEKDE-----------KTDCKLNQKQKAATLQQKVVQSKLNGF 60 I++ N++ SI+ +K E + KLN K TL V+ K Sbjct: 449 ----EIITNNNRENSIAADKSEEIREKQEAHINELQRKLNDTLKVQTLSISTVEDKFKAE 504
Query: 59 VLPVKRAVEDTS 24 +L K+ +E+ + Sbjct: 505 ILKTKKELEENA 516
>tr|A4RZC5|A4RZC5_OSTLU Predicted protein (Fragment) OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_432 PE=4 SV=1 Length = 829
Score = 37.7 bits (86), Expect = 0.40 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 2/115 (1%) Frame = -1
Query: 548 KVFLHAESELLQAFRQSLESVYAPERYAFAVQK--LENTSFEKDSCMLRELPEFETQRCD 375 KV LH E ELL ++ L +AP RY +AV + L NT ++ P T Sbjct: 323 KVMLHQEQELLTKMKEKLTEAFAPSRYTYAVSQAPLSNT---------KKRPSLST---S 370
Query: 374 FEELSQRTGSIQVELSENKNEDPIFLKEVVVEENLDDSSYKKSTTCSAAPAVLDS 210 FE G ++ E++++D +E+ E +D+ +++ + PA D+ Sbjct: 371 FE------GDDGDDVMEDEHDD----EELTPTECMDEETFETLLLTAKEPAANDT 415
>tr|Q0F8L6|Q0F8L6_9RHOB Possible peptidoglycan binding protein OS=Rhodobacterales bacterium HTCC2255 GN=OM2255_12982 PE=4 SV=1 Length = 448
Score = 36.6 bits (83), Expect = 0.89 Identities = 33/128 (25%), Positives = 58/128 (45%) Frame = -1
Query: 449 LENTSFEKDSCMLRELPEFETQRCDFEELSQRTGSIQVELSENKNEDPIFLKEVVVEENL 270 L+ E + + E E + D +E+ GSI + NK+E+ KE VVE Sbjct: 55 LDIVKVEVNEAVSNEAGPAEVKSIDQKEIPAVKGSIDTKEEINKSEEVPTTKEEVVESVE 114
Query: 269 DDSSYKKSTTCSAAPAVLDSFQCGVSIVSTNSKGGSISTEKDEKTDCKLNQKQKAATLQQ 90 + K+++T A P V D+ T K + E K D + +++AAT+++ Sbjct: 115 LPVTKKEASTVVAEPIVKDNVTTEKEEPVTKDKVTTAKVEPVTK-DKVTSSEEEAATMEE 173
Query: 89 KVVQSKLN 66 +V ++ N Sbjct: 174 TLVVTEEN 181
>tr|A6DHB7|A6DHB7_9BACT Putative uncharacterized protein OS=Lentisphaera araneosa HTCC2155 GN=LNTAR_14327 PE=4 SV=1 Length = 900
Score = 36.6 bits (83), Expect = 0.89 Identities = 41/151 (27%), Positives = 62/151 (41%), Gaps = 7/151 (4%) Frame = -1
Query: 434 FEKDSCMLRELPEFETQRCDFEELSQRTGSIQVELSENKNEDPIFLKEVVVEENLDDSSY 255 + K S L E P+ E ++ D + L+++ ++L K P K EE +S Sbjct: 56 YNKKSASLPEPPKTE-EKTDVKNLAKKALGTDIKLPGQKTAQPSPAKATKNEE-AGSASD 113
Query: 254 KKSTTCSAAPAVLDSFQCGVSIVSTNSKGGSISTEKDEKTDCKLNQKQKAATLQQKV--- 84 S +A VL S GV+ K +++ E Q+ AAT + KV Sbjct: 114 IASRIAAAKQRVLASNSDGVNETKPEPKPEKSESQELEDKIAAAKQRILAATTKDKVDVN 173
Query: 83 ----VQSKLNGFVLPVKRAVEDTSLSSEEPL 3 +Q KL P + EDTS SEE + Sbjct: 174 TTPTIQDKL-----PESKPTEDTSSPSEETI 199
>tr|Q6CRP2|Q6CRP2_KLULA KLLA0D07502p OS=Kluyveromyces lactis GN=KLLA0D07502g PE=4 SV=1 Length = 1243
Score = 36.6 bits (83), Expect = 0.89 Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 9/152 (5%) Frame = -1
Query: 485 YAPERYAFAVQKLEN-----TSFEKDSCMLREL---PEFETQRCDFEELSQRTGSIQVEL 330 Y P+ +F Q++E T E + +L+E P + ++ Q TG I + Sbjct: 774 YEPQLKSFT-QRIEELKSKLTKLESEKDVLQEQIFRPFTDKYGFSIKDYEQGTGEIMRKH 832
Query: 329 SENKNEDPIFLKEVVVEEN-LDDSSYKKSTTCSAAPAVLDSFQCGVSIVSTNSKGGSIST 153 S+ + F K+++ EN L+ + T + L + + K I T Sbjct: 833 SKELQQ---FQKQILTIENKLEFEKDRLGATAARHTKALSDMDKLKEALGSLEKQEDIIT 889
Query: 152 EKDEKTDCKLNQKQKAATLQQKVVQSKLNGFV 57 EK + D K++Q+Q+ +QQK + K++ + Sbjct: 890 EKIKNADSKISQEQQLVAIQQKELDEKVHNLI 921
>tr|Q9VGW4|Q9VGW4_DROME CG14692 OS=Drosophila melanogaster GN=CG14692 PE=4 SV=3 Length = 2743
Score = 36.2 bits (82), Expect = 1.2 Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 4/151 (2%) Frame = -1
Query: 449 LENTSFEKDSCMLRELPEFETQRCDFEELSQRTGSIQVELSENKNEDPIFLKE-VVVEEN 273 +EN S EK+S L E P T++ L + S + E S + NE P KE ++ Sbjct: 1214 VENPSPEKESTSLDEKPSSGTEKS--TSLDENPSS-EKEKSTSLNERPSSEKENSTSQDE 1270
Query: 272 LDDSSYKKSTTCSAAPAVLDSFQCGVSIVSTNSKGGSISTEKDEKTDCKLN---QKQKAA 102 S +KST+ P+ + S G S+EK++ T N +K+K+ Sbjct: 1271 KPSSETEKSTSLDEKPSSEKE--------KSTSLDGKPSSEKEKSTSLDENPSSEKEKST 1322
Query: 101 TLQQKVVQSKLNGFVLPVKRAVEDTSLSSEE 9 +L ++ K N L + E S S +E Sbjct: 1323 SLNERPSSEKENSTSLVENPSPEKESTSLDE 1353
>tr|A7TUG6|A7TUG6_RANCA Larval type I keratin OS=Rana catesbeiana GN=RLKI PE=2 SV=1 Length = 481
Score = 35.4 bits (80), Expect = 2.0 Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 2/159 (1%) Frame = -1
Query: 539 LHAESELLQAFRQSLESVYAPE--RYAFAVQKLENTSFEKDSCMLRELPEFETQRCDFEE 366 L E + A ++SLE A RY +Q+L+N + +++ + E Q ++ E Sbjct: 323 LEIELQSQLAMKKSLEDTLAETEGRYGGQLQQLQNVISGLEEQLIQIRQDMERQSMEYRE 382
Query: 365 LSQRTGSIQVELSENKNEDPIFLKEVVVEENLDDSSYKKSTTCSAAPAVLDSFQCGVSIV 186 L +++E+ + ++E L S S++ SA+ S S + Sbjct: 383 LLDIKNRLEMEIETYRR---------LLEGELGQFSQSSSSSSSASKGA--SSSVSTSQI 431
Query: 185 STNSKGGSISTEKDEKTDCKLNQKQKAATLQQKVVQSKL 69 S++S S ++ D K D +K K T+ ++V+ K+ Sbjct: 432 SSSSTTKSQTSSIDSKKDPTKTRKVK--TIVEEVIDGKV 468
>tr|B6WQV3|B6WQV3_9DELT Putative uncharacterized protein OS=Desulfovibrio piger ATCC 29098 GN=DESPIG_00431 PE=4 SV=1 Length = 465
Score = 35.4 bits (80), Expect = 2.0 Identities = 21/64 (32%), Positives = 34/64 (53%) Frame = -1
Query: 449 LENTSFEKDSCMLRELPEFETQRCDFEELSQRTGSIQVELSENKNEDPIFLKEVVVEENL 270 LEN S EK C LR +P + E L++ GS+ V++ EN + D +++ E Sbjct: 57 LENLSLEKQVCALRHMPTEDAA----EALAELEGSVAVDVLENLDAD--VAAQIIAEMEP 110
Query: 269 DDSS 258 DD++ Sbjct: 111 DDAA 114
>tr|A7Q0A6|A7Q0A6_VITVI Chromosome chr7 scaffold_42, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027977001 PE=4 SV=1 Length = 895
Score = 35.4 bits (80), Expect = 2.0 Identities = 26/102 (25%), Positives = 46/102 (45%) Frame = -1
Query: 548 KVFLHAESELLQAFRQSLESVYAPERYAFAVQKLENTSFEKDSCMLRELPEFETQRCDFE 369 K+F E +L + R+ LE +Y+P +++V + E + E D+ EL +TQ Sbjct: 325 KIFFSDEGSILHSLREGLEKIYSPSLTSYSVNRFEEPTEETDN---SELNPPQTQILSSS 381
Query: 368 ELSQRTGSIQVELSENKNEDPIFLKEVVVEENLDDSSYKKST 243 + GS +L E + + E + E+ + K ST Sbjct: 382 KQLFPDGS---DLQEEAHSE-----EQITEDQIPSKMVKSST 415
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