BP913171
Clone id YMU001_000027_C08
Library
Length 408
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000027_C08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTTGAATTAACATTAAGTAGCAACTCTCGCTTCAATAAAATCGAGAGCAGCCGACGATCT
TAATCAAGTTAAGAGTAGAAACATTCTTTTGCTAGGGATAAGTGATAATTAGAGATGATG
ATCACTGCATTCATCCAGTTACAACCAAGGCACTTTTACTTAATACCAGCAAATGCTGGT
CGGATTGAAATGAGAGGATCCCCATAACCAACCGGTTCTCCATCCTTGCACAAAATCTTC
ACGACTTCACCAGAATTCTCAGCCTTATCTATACCTCGAATAGCAAAGCTAGGAGGCTGT
GTCGACAAACTTTGCTATTATTTACATGACTAAAGCTGCCGGACCAAAACTCGACAGGCT
GCTGTGTCCCAAGTTGTTCGACATAACAAACCACTTGACCTTCTTTCA
■■Homology search results ■■ -
sp_hit_id Q06881
Definition sp|Q06881|BCCP_ANASP Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Anabaena sp. (strain PCC 7120)
Align length 30
Score (bit) 37.0
E-value 0.03
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913171|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_C08.
(408 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q06881|BCCP_ANASP Biotin carboxyl carrier protein of acetyl-C... 37 0.030
sp|Q9LLC1|BCCP2_ARATH Biotin carboxyl carrier protein of acetyl-... 32 0.90
sp|P49786|BCCP_BACSU Biotin carboxyl carrier protein of acetyl-C... 31 2.2
sp|Q42533|BCCP1_ARATH Biotin carboxyl carrier protein of acetyl-... 30 4.8
sp|Q63046|RUNX1_RAT Runt-related transcription factor 1 OS=Rattu... 29 6.5
sp|P60857|PTGA_STAAN Glucose-specific phosphotransferase enzyme ... 29 8.2
sp|P60856|PTGA_STAAM Glucose-specific phosphotransferase enzyme ... 29 8.2

>sp|Q06881|BCCP_ANASP Biotin carboxyl carrier protein of acetyl-CoA
carboxylase OS=Anabaena sp. (strain PCC 7120) GN=accB
PE=1 SV=2
Length = 182

Score = 37.0 bits (84), Expect = 0.030
Identities = 15/30 (50%), Positives = 24/30 (80%)
Frame = -2

Query: 266 KAENSGEVVKILCKDGEPVGYGDPLISIRP 177
+A+ SG+V++IL ++GEPV Y PL+ I+P
Sbjct: 152 EADVSGQVIEILVQNGEPVEYNQPLMRIKP 181


>sp|Q9LLC1|BCCP2_ARATH Biotin carboxyl carrier protein of acetyl-CoA
carboxylase 2, chloroplastic OS=Arabidopsis thaliana
GN=BCCP2 PE=1 SV=1
Length = 255

Score = 32.0 bits (71), Expect(2) = 0.90
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -2

Query: 266 KAENSGEVVKILCKDGEPVGYGDPLISIRP 177
+AE SG ++++L +DG+PV PL I P
Sbjct: 226 EAEKSGTIMELLAEDGKPVSVDTPLFVIAP 255



Score = 20.4 bits (41), Expect(2) = 0.90
Identities = 6/19 (31%), Positives = 12/19 (63%)
Frame = -3

Query: 406 KEGQVVCYVEQLGTQQPVE 350
++GQ+VC +E + +E
Sbjct: 208 QKGQIVCIIEAMKLMNEIE 226


>sp|P49786|BCCP_BACSU Biotin carboxyl carrier protein of acetyl-CoA
carboxylase OS=Bacillus subtilis GN=accB PE=3 SV=2
Length = 159

Score = 30.8 bits (68), Expect = 2.2
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = -2

Query: 266 KAENSGEVVKILCKDGEPVGYGDPLISIR 180
+AE GE+V++L ++G+ V YG PL ++
Sbjct: 129 EAEVKGEIVEVLVENGQLVEYGQPLFLVK 157


>sp|Q42533|BCCP1_ARATH Biotin carboxyl carrier protein of acetyl-CoA
carboxylase 1, chloroplastic OS=Arabidopsis thaliana
GN=BCCP1 PE=1 SV=2
Length = 280

Score = 29.6 bits (65), Expect = 4.8
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -2

Query: 266 KAENSGEVVKILCKDGEPVGYGDPLISIRP 177
+++++G VV I+ +DG+PV PL ++P
Sbjct: 251 ESDHTGTVVDIVAEDGKPVSLDTPLFVVQP 280


>sp|Q63046|RUNX1_RAT Runt-related transcription factor 1 OS=Rattus
norvegicus GN=Runx1 PE=2 SV=1
Length = 450

Score = 29.3 bits (64), Expect = 6.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1

Query: 151 HFYLIPANAGRIEMRGSP*PTGSPSLHKIFTTS 249
H YL P G + + P TGSPS H + TS
Sbjct: 349 HTYLPPPYPGSSQAQAGPFQTGSPSYHLYYGTS 381


>sp|P60857|PTGA_STAAN Glucose-specific phosphotransferase enzyme IIA
component OS=Staphylococcus aureus (strain N315) GN=crr
PE=1 SV=1
Length = 166

Score = 28.9 bits (63), Expect = 8.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2

Query: 275 GIDKAENSGEVVKILCKDGEPVGYGDPLISIRPAF 171
G+D + GE ++L G+ V GDPL+ F
Sbjct: 88 GLDTVQLDGEGFEVLVSSGDEVNVGDPLVRFNLEF 122


>sp|P60856|PTGA_STAAM Glucose-specific phosphotransferase enzyme IIA
component OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=crr PE=1 SV=1
Length = 166

Score = 28.9 bits (63), Expect = 8.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2

Query: 275 GIDKAENSGEVVKILCKDGEPVGYGDPLISIRPAF 171
G+D + GE ++L G+ V GDPL+ F
Sbjct: 88 GLDTVQLDGEGFEVLVSSGDEVNVGDPLVRFNLEF 122


tr_hit_id A9NN96
Definition tr|A9NN96|A9NN96_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 35
Score (bit) 56.2
E-value 3.0e-10
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913171|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_C08.
(408 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NN96|A9NN96_PICSI Putative uncharacterized protein OS=Picea... 56 3e-10
tr|A5BYY0|A5BYY0_VITVI Putative uncharacterized protein OS=Vitis... 53 8e-10
tr|Q8VZ68|Q8VZ68_ARATH Putative uncharacterized protein At1g5267... 50 2e-09
tr|Q8GRT9|Q8GRT9_ARATH Putative acetyl-CoA carboxylase biotin-co... 51 2e-09
tr|Q9SSR9|Q9SSR9_ARATH F6D8.11 protein OS=Arabidopsis thaliana G... 50 2e-09
tr|Q2HVX5|Q2HVX5_MEDTR Biotin/lipoyl attachment OS=Medicago trun... 52 2e-09
tr|A9S3B2|A9S3B2_PHYPA Predicted protein OS=Physcomitrella paten... 57 6e-07
tr|A7Q3Q6|A7Q3Q6_VITVI Chromosome chr13 scaffold_48, whole genom... 50 7e-07
tr|A9TAN6|A9TAN6_PHYPA Predicted protein OS=Physcomitrella paten... 55 2e-06
tr|A9SAT7|A9SAT7_PHYPA Predicted protein OS=Physcomitrella paten... 54 5e-06
tr|Q93W03|Q93W03_ARATH AT3g56130/F18O21_90 OS=Arabidopsis thalia... 43 2e-05
tr|Q9LYM8|Q9LYM8_ARATH Putative uncharacterized protein F18O21_9... 43 2e-05
tr|Q3EAI9|Q3EAI9_ARATH Uncharacterized protein At3g56130.2 OS=Ar... 43 2e-05
tr|Q2V3N9|Q2V3N9_ARATH Uncharacterized protein At3g56130.3 OS=Ar... 43 2e-05
tr|Q1ILG1|Q1ILG1_ACIBL Biotin carboxyl carrier protein OS=Acidob... 36 0.11
tr|Q116D5|Q116D5_TRIEI Biotin carboxyl carrier protein OS=Tricho... 38 0.22
tr|A6XGT6|A6XGT6_9CHLO Biotin carboxyl carrier protein (Fragment... 30 0.26
tr|Q2B5Q2|Q2B5Q2_9BACI Acetyl-CoA carboxylase OS=Bacillus sp. NR... 38 0.29
tr|A5B6T4|A5B6T4_VITVI Putative uncharacterized protein OS=Vitis... 35 0.37
tr|Q7VEI6|Q7VEI6_PROMA Biotin carboxyl carrier protein OS=Prochl... 37 0.38
tr|A6CNF6|A6CNF6_9BACI Acetyl-CoA carboxylase (Fragment) OS=Baci... 37 0.38
tr|Q3MAQ4|Q3MAQ4_ANAVT Biotin carboxyl carrier protein OS=Anabae... 37 0.50
tr|B5ELB3|B5ELB3_ACIF5 Acetyl-CoA carboxylase, biotin carboxyl c... 37 0.50
tr|B7J3U2|B7J3U2_THIFE Acetyl-CoA carboxylase, biotin carboxyl c... 37 0.50
tr|B1I3L5|B1I3L5_DESAP Acetyl-CoA carboxylase, biotin carboxyl c... 35 0.59
tr|Q9LW10|Q9LW10_ARATH Arabidopsis thaliana genomic DNA, chromos... 35 0.62
tr|B1XKV0|B1XKV0_SYNP2 Acetyl-CoA carboxylase, biotin carboxyl c... 37 0.65
tr|Q7WEA0|Q7WEA0_BORBR Biotin carboxyl carrier protein of acetyl... 36 0.85
tr|Q7UA66|Q7UA66_SYNPX Biotin carboxyl carrier protein (BCCP) su... 36 0.85
tr|Q5NHI2|Q5NHI2_FRATT Acetyl-CoA carboxylase, biotin carboxyl c... 36 0.85

>tr|A9NN96|A9NN96_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 299

Score = 56.2 bits (134), Expect(2) = 3e-10
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = -2

Query: 263 AENSGEVVKILCKDGEPVGYGDPLISIRPAFAGIK 159
+E SGE+VKIL DGEPVGYGDPLI++ P+F GIK
Sbjct: 265 SEVSGEIVKILWSDGEPVGYGDPLIAVLPSFRGIK 299



Score = 32.3 bits (72), Expect(2) = 3e-10
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -3

Query: 406 KEGQVVCYVEQLGTQQPV 353
KEGQVVC+++QLG Q PV
Sbjct: 246 KEGQVVCFLDQLGGQTPV 263


>tr|A5BYY0|A5BYY0_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_031448 PE=4 SV=1
Length = 252

Score = 52.8 bits (125), Expect(2) = 8e-10
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = -2

Query: 266 KAENSGEVVKILCKDGEPVGYGDPLISIRPAFAGIK 159
+++ SGEV+KIL +DGEPVGYGD LI+I P+F GIK
Sbjct: 214 ESDVSGEVIKILREDGEPVGYGDALIAILPSFPGIK 249



Score = 34.3 bits (77), Expect(2) = 8e-10
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = -3

Query: 406 KEGQVVCYVEQLGTQQPVE 350
KEGQV+CY+EQLG + P+E
Sbjct: 196 KEGQVLCYIEQLGGEIPIE 214


>tr|Q8VZ68|Q8VZ68_ARATH Putative uncharacterized protein At1g52670
(Is a member of the PF|00364 Biotin-requiring enzymes
family) OS=Arabidopsis thaliana GN=At1g52670 PE=2 SV=1
Length = 274

Score = 50.1 bits (118), Expect(2) = 2e-09
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = -2

Query: 266 KAENSGEVVKILCKDGEPVGYGDPLISIRPAFAGIK 159
+++ SGE+VKIL +DGEPVGY D LI++ P+F GIK
Sbjct: 236 ESDVSGEIVKILREDGEPVGYNDALITVLPSFPGIK 271



Score = 35.8 bits (81), Expect(2) = 2e-09
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -3

Query: 406 KEGQVVCYVEQLGTQQPVE 350
KEGQV+CY+EQLG Q PVE
Sbjct: 218 KEGQVLCYIEQLGGQIPVE 236


>tr|Q8GRT9|Q8GRT9_ARATH Putative acetyl-CoA carboxylase
biotin-containing subunit OS=Arabidopsis thaliana
GN=At3g15690 PE=2 SV=1
Length = 263

Score = 50.8 bits (120), Expect(2) = 2e-09
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = -2

Query: 266 KAENSGEVVKILCKDGEPVGYGDPLISIRPAFAGIK 159
+++ +GEVVKIL +DGEPVGY D LISI P+F GIK
Sbjct: 225 ESDVTGEVVKILREDGEPVGYNDALISILPSFPGIK 260



Score = 35.0 bits (79), Expect(2) = 2e-09
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = -3

Query: 406 KEGQVVCYVEQLGTQQPVE 350
KEGQ++CY+EQLG Q P+E
Sbjct: 207 KEGQILCYIEQLGGQFPIE 225


>tr|Q9SSR9|Q9SSR9_ARATH F6D8.11 protein OS=Arabidopsis thaliana
GN=F6D8.11 PE=4 SV=1
Length = 234

Score = 50.1 bits (118), Expect(2) = 2e-09
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = -2

Query: 266 KAENSGEVVKILCKDGEPVGYGDPLISIRPAFAGIK 159
+++ SGE+VKIL +DGEPVGY D LI++ P+F GIK
Sbjct: 196 ESDVSGEIVKILREDGEPVGYNDALITVLPSFPGIK 231



Score = 35.8 bits (81), Expect(2) = 2e-09
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -3

Query: 406 KEGQVVCYVEQLGTQQPVE 350
KEGQV+CY+EQLG Q PVE
Sbjct: 178 KEGQVLCYIEQLGGQIPVE 196


>tr|Q2HVX5|Q2HVX5_MEDTR Biotin/lipoyl attachment OS=Medicago
truncatula GN=MtrDRAFT_AC148340g25v2 PE=4 SV=2
Length = 282

Score = 51.6 bits (122), Expect(2) = 2e-09
Identities = 23/36 (63%), Positives = 31/36 (86%)
Frame = -2

Query: 266 KAENSGEVVKILCKDGEPVGYGDPLISIRPAFAGIK 159
+++ SGEV+KIL +DG+PVGYGD LI+I P+F GIK
Sbjct: 243 ESDVSGEVIKILREDGDPVGYGDTLIAILPSFPGIK 278



Score = 33.9 bits (76), Expect(2) = 2e-09
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = -3

Query: 406 KEGQVVCYVEQLGTQQPVE 350
+EG+V+CY+EQLG Q PVE
Sbjct: 225 EEGKVICYIEQLGGQLPVE 243


>tr|A9S3B2|A9S3B2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_162594 PE=4 SV=1
Length = 294

Score = 56.6 bits (135), Expect = 6e-07
Identities = 30/54 (55%), Positives = 37/54 (68%)
Frame = -2

Query: 314 QSLSTQPPSFAIRGIDKAENSGEVVKILCKDGEPVGYGDPLISIRPAFAGIK*K 153
+ L TQ P +AE +GEV K+L +DG PVGYGDPLI+IRP+F GIK K
Sbjct: 244 EQLGTQQPV-------EAEVTGEVEKVLWEDGAPVGYGDPLIAIRPSFPGIKVK 290



Score = 40.4 bits (93), Expect = 0.045
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = -3

Query: 406 KEGQVVCYVEQLGTQQPVE 350
K+GQVVCY+EQLGTQQPVE
Sbjct: 235 KKGQVVCYLEQLGTQQPVE 253


>tr|A7Q3Q6|A7Q3Q6_VITVI Chromosome chr13 scaffold_48, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00029376001
PE=4 SV=1
Length = 288

Score = 49.7 bits (117), Expect(2) = 7e-07
Identities = 19/36 (52%), Positives = 30/36 (83%)
Frame = -2

Query: 266 KAENSGEVVKILCKDGEPVGYGDPLISIRPAFAGIK 159
K++ +GEV+K++ DGE VGYGDPL+++ P+F GI+
Sbjct: 253 KSDTAGEVLKVIFNDGEAVGYGDPLVAVLPSFHGIE 288



Score = 27.3 bits (59), Expect(2) = 7e-07
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = -3

Query: 406 KEGQVVCYVEQLGTQQPVE 350
KEGQV+ Y++Q G++ PV+
Sbjct: 235 KEGQVIGYLDQFGSELPVK 253


>tr|A9TAN6|A9TAN6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_168965 PE=4 SV=1
Length = 370

Score = 55.1 bits (131), Expect = 2e-06
Identities = 29/51 (56%), Positives = 35/51 (68%)
Frame = -2

Query: 314 QSLSTQPPSFAIRGIDKAENSGEVVKILCKDGEPVGYGDPLISIRPAFAGI 162
+ L TQ P +A+ +GEV K+L KDGEPVGYGD LISIRP+F GI
Sbjct: 324 EQLGTQQPV-------EADITGEVEKVLSKDGEPVGYGDVLISIRPSFPGI 367



Score = 40.0 bits (92), Expect = 0.059
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = -3

Query: 406 KEGQVVCYVEQLGTQQPVE 350
K+GQ+VCY+EQLGTQQPVE
Sbjct: 315 KKGQIVCYLEQLGTQQPVE 333


>tr|A9SAT7|A9SAT7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_163869 PE=4 SV=1
Length = 300

Score = 53.5 bits (127), Expect = 5e-06
Identities = 27/54 (50%), Positives = 37/54 (68%)
Frame = -2

Query: 314 QSLSTQPPSFAIRGIDKAENSGEVVKILCKDGEPVGYGDPLISIRPAFAGIK*K 153
+ L TQ P +A+ +GEV K+L +DG PVGYGDPLI+++P+F GIK K
Sbjct: 249 EQLGTQQPV-------EADVTGEVEKVLWEDGVPVGYGDPLIAVKPSFPGIKVK 295



Score = 42.0 bits (97), Expect = 0.015
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = -3

Query: 406 KEGQVVCYVEQLGTQQPVE 350
KEGQVVCY+EQLGTQQPVE
Sbjct: 240 KEGQVVCYLEQLGTQQPVE 258