BP913173
Clone id YMU001_000027_C12
Library
Length 608
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000027_C12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CAAGTTGTGGATGATGGACTCAATGGCATAATAAACTTCATCAAAGATCGTATACCTGAT
GTAAAGCTAAAGGTTTTCAGAGTCATTGCCCAAAATGGAGAGGATATTCCAAAAATTGTT
GAACAGATTTTGGAAGAGGTTGATGCTCGCGATGGTGAGGGAGCAAAGAAAGGGAATGAA
GCTATCAATGAGGAGGTACTACAAGAAGCCAAAGAGAAAGCTGGAGATGTTGGTGAGTCG
GCACAGGAAGTGCAGAGGGAAATACCCATCAGATTGATTGTGGGTGGAACTCTACAGAGT
GCATCAGATGATAAACTTCAAAAGGCTCCAATAAGGAGGCGGGCAAGAATTGAAAATCAA
AGTAAAGATTCTTTTCTCTTGCACATAGATGAAATATTGAAACCAGTGCCCATAAAAGAG
TTGTTGCCGCCGGCGAAAGCCTCTTCAGTTGCAATGCATTGACTTCTACTGAGCTCCCTT
CTGATATCTCAAAAGTAGTCTCAAACCTTGACAAGGTTCCGGTAAAAGTATCTAAGGATA
TGGGAGAACTTCTGAAGATTGCTATCAGTCAAGTACAGCGACGACGTGGTTTGTCTAAAT
GTACTTCC
■■Homology search results ■■ -
sp_hit_id Q93YW0
Definition sp|Q93YW0|EXEC1_ARATH Protein EXECUTER 1, chloroplastic OS=Arabidopsis thaliana
Align length 136
Score (bit) 52.0
E-value 5.0e-12
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913173|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_C12.
(608 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q93YW0|EXEC1_ARATH Protein EXECUTER 1, chloroplastic OS=Arabi... 52 5e-12
sp|Q9C105|YKT4_SCHPO Chitinase-like protein PB1E7.04c OS=Schizos... 37 0.060
sp|P04050|RPB1_YEAST DNA-directed RNA polymerase II subunit RPB1... 37 0.079
sp|P16356|RPB1_CAEEL DNA-directed RNA polymerase II subunit RPB1... 37 0.079
sp|P18616|RPB1_ARATH DNA-directed RNA polymerase II subunit RPB1... 37 0.079
sp|A5DCV3|RPB1_PICGU DNA-directed RNA polymerase II subunit RPB1... 37 0.10
sp|P35084|RPB1_DICDI DNA-directed RNA polymerase II subunit rpb1... 37 0.10
sp|P35074|RPB1_CAEBR DNA-directed RNA polymerase II subunit RPB1... 37 0.10
sp|Q75A34|RPB1_ASHGO DNA-directed RNA polymerase II subunit RPB1... 36 0.13
sp|P36594|RPB1_SCHPO DNA-directed RNA polymerase II subunit rpb1... 36 0.18
sp|Q8R9D0|MUTS2_THETN MutS2 protein OS=Thermoanaerobacter tengco... 36 0.18
sp|Q8FQ17|Y1318_COREF UPF0286 protein CE1318 OS=Corynebacterium ... 35 0.23
sp|P32323|AGA1_YEAST A-agglutinin anchorage subunit OS=Saccharom... 35 0.23
sp|A2ASS6|TITIN_MOUSE Titin OS=Mus musculus GN=Ttn PE=1 SV=1 35 0.30
sp|P08775|RPB1_MOUSE DNA-directed RNA polymerase II subunit RPB1... 35 0.30
sp|P24928|RPB1_HUMAN DNA-directed RNA polymerase II subunit RPB1... 35 0.30
sp|Q8SSC4|RPB1_ENCCU DNA-directed RNA polymerase II subunit RPB1... 35 0.30
sp|P11414|RPB1_CRIGR DNA-directed RNA polymerase II subunit RPB1... 35 0.30
sp|Q8SW86|Y2F4_ENCCU UPF0329 protein ECU02_1540 OS=Encephalitozo... 33 0.87
sp|P47799|FSHR_HORSE Follicle-stimulating hormone receptor OS=Eq... 33 0.87
sp|Q1ZXQ8|MTAA_DICDI Centrosomal protein 224 OS=Dictyostelium di... 33 1.1
sp|Q54Z23|INT6_DICDI Integrator complex subunit 6 homolog OS=Dic... 33 1.1
sp|Q8SUH9|Y8K7_ENCCU UPF0329 protein ECU08_2070 OS=Encephalitozo... 33 1.5
sp|P02547|NFL_PIG Neurofilament light polypeptide OS=Sus scrofa ... 33 1.5
sp|P35376|FSHR_BOVIN Follicle-stimulating hormone receptor OS=Bo... 33 1.5
sp|P35379|FSHR_SHEEP Follicle-stimulating hormone receptor OS=Ov... 32 1.9
sp|Q5GJ04|FSHR_FELCA Follicle-stimulating hormone receptor OS=Fe... 32 1.9
sp|Q8R428|FSHR_CAVPO Follicle-stimulating hormone receptor OS=Ca... 32 1.9
sp|P34735|YLU2_PICAN Uncharacterized protein in LEU2 3'region (F... 32 2.5
sp|Q9P7F1|YKK5_SCHPO Carbohydrate-binding domain-containing prot... 32 2.5

>sp|Q93YW0|EXEC1_ARATH Protein EXECUTER 1, chloroplastic
OS=Arabidopsis thaliana GN=EX1 PE=1 SV=1
Length = 684

Score = 52.0 bits (123), Expect(2) = 5e-12
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 10/136 (7%)
Frame = +1

Query: 22 NGIINFIKDRIPDVKLKVFRVIAQNGED---IPKIVEQILEEVDARDGEGAKKGNEAINE 192
+G +F++D IP VK+KV +V A D I K++EQI +E D + + + + +
Sbjct: 321 SGFQSFLRDMIPGVKVKVMKVTAPGRVDKDFISKVIEQIADEEDEENDLDIEDID--VED 378

Query: 193 EVLQEAKEKAGDVG-ESAQEV------QREIPIRLIVGGTLQSASDDKLQKAPIRRRARI 351
+ E EK D+ ES + REI ++ ++G + S ++ K +R A +
Sbjct: 379 DTKAEIDEKNADIELESVTDEIIDNNGGREIAVKFVIGDIVDRLSGNQPLKESLRSPANL 438

Query: 352 ENQSKDSFLLHIDEIL 399
E+ SF L +++ L
Sbjct: 439 ESVENSSFYLRLEKDL 454



Score = 38.9 bits (89), Expect(2) = 5e-12
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = +3

Query: 483 DISKVVSNLDKVPVKVSKDMGELLKIAISQVQRRRGLSKCT 605
D++K + K+ VK+ KD+GELL + +SQ Q R+ LS T
Sbjct: 486 DLAKSIEKEKKISVKMLKDVGELLSLTLSQAQNRQQLSGLT 526


>sp|Q9C105|YKT4_SCHPO Chitinase-like protein PB1E7.04c
OS=Schizosaccharomyces pombe GN=SPAPB1E7.04c PE=2 SV=1
Length = 1236

Score = 37.4 bits (85), Expect = 0.060
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Frame = -1

Query: 290 VPPTINLMGISLCTSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIF 111
+P T + + S+ +S SP+S + S++S STSS +S SPS S+S STI
Sbjct: 569 IPSTFSSVS-SILSSSTSSPSSTSLSISSSSTSSTFSSAS--TSSPSSISSSISSSSTIL 625

Query: 110 GISSPFW-AMTLKTFSFTSGIRSLMKFIMPLSPSSTT 3
+P ++ + + S SG S++ + P S++
Sbjct: 626 SSPTPSTSSLMISSSSIISGSSSILSSSISTIPISSS 662


>sp|P04050|RPB1_YEAST DNA-directed RNA polymerase II subunit RPB1
OS=Saccharomyces cerevisiae GN=RPB1 PE=1 SV=2
Length = 1733

Score = 37.0 bits (84), Expect = 0.079
Identities = 45/159 (28%), Positives = 63/159 (39%)
Frame = -1

Query: 488 DIRRELSRSQCIATEEAFAGGNNSFMGTGFNISSMCKRKESLL*FSILARLLIGAF*SLS 309
D++ EL S + + G+N M GF E+ F +S
Sbjct: 1485 DVKDELMFSPLVDS------GSNDAMAGGFTAYGGADYGEATSPFGAYGEAPTSPGFGVS 1538

Query: 308 SDALCRVPPTINLMGISLCTSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSK 129
S PT + TS A SPTSP++S S S S S+ +PS S S S
Sbjct: 1539 SPGFSPTSPTYSP------TSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1592

Query: 128 ICSTIFGISSPFWAMTLKTFSFTSGIRSLMKFIMPLSPS 12
S + +SP ++ T ++S TS S P SPS
Sbjct: 1593 PTSPSYSPTSPSYSPTSPSYSPTSPSYS------PTSPS 1625



Score = 35.4 bits (80), Expect = 0.23
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1594 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1653

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1654 YSPTSPAYS------PTSPS 1667



Score = 35.4 bits (80), Expect = 0.23
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1615 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPS 1674

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1675 YSPTSPSYS------PTSPS 1688



Score = 35.0 bits (79), Expect = 0.30
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1566 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1625

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1626 YSPTSPSYS------PTSPS 1639



Score = 35.0 bits (79), Expect = 0.30
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1580 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1639

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1640 YSPTSPSYS------PTSPS 1653



Score = 35.0 bits (79), Expect = 0.30
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1608 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPS 1667

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1668 YSPTSPSYS------PTSPS 1681



Score = 33.5 bits (75), Expect = 0.87
Identities = 28/80 (35%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +P+ S S S S + +SP ++ T +
Sbjct: 1629 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1688

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1689 YSPTSPNYS------PTSPS 1702



Score = 32.7 bits (73), Expect = 1.5
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S + S S+ +PS S S S S + +SP ++ T +
Sbjct: 1643 TSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPS 1702

Query: 71 FSFTS 57
+S TS
Sbjct: 1703 YSPTS 1707



Score = 32.0 bits (71), Expect = 2.5
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSPA+S S S S S+ +PS S S S S + +SP ++ T
Sbjct: 1650 TSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPG 1709

Query: 71 FS 66
+S
Sbjct: 1710 YS 1711


>sp|P16356|RPB1_CAEEL DNA-directed RNA polymerase II subunit RPB1
OS=Caenorhabditis elegans GN=ama-1 PE=1 SV=2
Length = 1852

Score = 37.0 bits (84), Expect = 0.079
Identities = 26/65 (40%), Positives = 36/65 (55%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S +S S S + SSP ++ T T
Sbjct: 1622 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPT 1681

Query: 71 FSFTS 57
+S TS
Sbjct: 1682 YSPTS 1686



Score = 36.2 bits (82), Expect = 0.13
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S +S S S + +SP ++ T T
Sbjct: 1629 TSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPT 1688

Query: 71 FSFTSGIRS-LMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1689 YSPTSPTYSPTSPTYSPTSPS 1709



Score = 33.1 bits (74), Expect = 1.1
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + SSP ++ +
Sbjct: 1615 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPR 1674

Query: 71 FSFTS 57
+S TS
Sbjct: 1675 YSPTS 1679



Score = 30.8 bits (68), Expect = 5.6
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = -1

Query: 236 SPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKTFSFTS 57
SPTSP++S S S S S+ +PS S S S S + SSP ++ + ++S +S
Sbjct: 1613 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSS 1672


>sp|P18616|RPB1_ARATH DNA-directed RNA polymerase II subunit RPB1
OS=Arabidopsis thaliana GN=RPB205 PE=1 SV=2
Length = 1840

Score = 37.0 bits (84), Expect = 0.079
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS A SPTSPA+S S + S S+ +PS S S S S + +SP ++ T
Sbjct: 1639 TSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPA 1698

Query: 71 FSFTS-GIRSLMKFIMPLSPS 12
+S TS G P SPS
Sbjct: 1699 YSPTSPGYSPTSPSYSPTSPS 1719



Score = 36.2 bits (82), Expect = 0.13
Identities = 30/80 (37%), Positives = 39/80 (48%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS A SPTSP++S S S S S+ +PS S S S S + +SP ++ T
Sbjct: 1590 TSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPA 1649

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1650 YSPTSPAYS------PTSPS 1663



Score = 34.3 bits (77), Expect = 0.51
Identities = 28/80 (35%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S + S + +SP ++ T +
Sbjct: 1604 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPS 1663

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1664 YSPTSPSYS------PTSPS 1677



Score = 33.1 bits (74), Expect = 1.1
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSPA+S S + S ++ +PS S S S S + +SP ++ T +
Sbjct: 1632 TSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1691

Query: 71 FSFTS 57
+S TS
Sbjct: 1692 YSPTS 1696



Score = 31.6 bits (70), Expect = 3.3
Identities = 26/80 (32%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S ++ +P+ S S + S + +SP ++ T +
Sbjct: 1618 TSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPS 1677

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1678 YSPTSPSYS------PTSPS 1691



Score = 31.2 bits (69), Expect = 4.3
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS SPTSP +S +S S ++ +PS S S S S + +SP ++ T +
Sbjct: 1569 TSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1628

Query: 71 FSFTS 57
+S TS
Sbjct: 1629 YSPTS 1633



Score = 30.8 bits (68), Expect = 5.6
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS SP+SP +S S + S S+ +PS S S S S + +SP ++ T +
Sbjct: 1576 TSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1635

Query: 71 FSFTS 57
+S TS
Sbjct: 1636 YSPTS 1640



Score = 30.8 bits (68), Expect = 5.6
Identities = 22/65 (33%), Positives = 34/65 (52%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S + S + +SP ++ T +
Sbjct: 1660 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPS 1719

Query: 71 FSFTS 57
+ TS
Sbjct: 1720 YGPTS 1724



Score = 30.8 bits (68), Expect = 5.6
Identities = 25/83 (30%), Positives = 37/83 (44%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S ++ +P S S S S +G +SP +
Sbjct: 1674 TSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAK 1733

Query: 71 FSFTSGIRSLMKFIMPLSPSSTT 3
+S + + P SP S T
Sbjct: 1734 YSPSIAYSPSNARLSPASPYSPT 1756


>sp|A5DCV3|RPB1_PICGU DNA-directed RNA polymerase II subunit RPB1
(Fragments) OS=Pichia guilliermondii GN=RPB1 PE=3 SV=2
Length = 1579

Score = 36.6 bits (83), Expect = 0.10
Identities = 29/80 (36%), Positives = 41/80 (51%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1437 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1496

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS + S P SPS
Sbjct: 1497 YSPTSPLYS------PTSPS 1510



Score = 36.6 bits (83), Expect = 0.10
Identities = 29/80 (36%), Positives = 41/80 (51%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S ++ +SP ++ T +
Sbjct: 1458 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPS 1517

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1518 YSPTSPSYS------PTSPS 1531



Score = 35.8 bits (81), Expect = 0.18
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1451 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPS 1510

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1511 YSPTSPSYS------PTSPS 1524



Score = 35.0 bits (79), Expect = 0.30
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1388 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1447

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1448 YSPTSPSYS------PTSPS 1461



Score = 35.0 bits (79), Expect = 0.30
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1402 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1461

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1462 YSPTSPSYS------PTSPS 1475



Score = 35.0 bits (79), Expect = 0.30
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1416 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1475

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1476 YSPTSPSYS------PTSPS 1489



Score = 34.7 bits (78), Expect = 0.39
Identities = 29/80 (36%), Positives = 39/80 (48%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1381 TSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1440

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1441 YSPTSPSYS------PTSPS 1454



Score = 32.0 bits (71), Expect = 2.5
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +P S S S S + +SP ++ T +
Sbjct: 1472 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1531

Query: 71 FSFTS 57
+S TS
Sbjct: 1532 YSPTS 1536



Score = 31.2 bits (69), Expect = 4.3
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S + +PS S S S S + +SP ++ T
Sbjct: 1479 TSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQ 1538

Query: 71 FSFTS 57
+S TS
Sbjct: 1539 YSPTS 1543



Score = 31.2 bits (69), Expect = 4.3
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S+ +PS S S S S + +SP ++ T
Sbjct: 1486 TSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPA 1545

Query: 71 FSFTS 57
+S TS
Sbjct: 1546 YSPTS 1550



Score = 30.4 bits (67), Expect = 7.4
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP +S S S S S+ +PS S S S S + +SP ++ T
Sbjct: 1493 TSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPAYSPTSPQ 1552

Query: 71 FS 66
+S
Sbjct: 1553 YS 1554


>sp|P35084|RPB1_DICDI DNA-directed RNA polymerase II subunit rpb1
OS=Dictyostelium discoideum GN=polr2a PE=2 SV=2
Length = 1727

Score = 36.6 bits (83), Expect = 0.10
Identities = 28/75 (37%), Positives = 38/75 (50%)
Frame = -1

Query: 236 SPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKTFSFTS 57
SPTSP++S S S S S+ +PS S S S S + +SPF++ T ++S TS
Sbjct: 1554 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTS 1613

Query: 56 GIRSLMKFIMPLSPS 12
S P SPS
Sbjct: 1614 PSYS------PTSPS 1622



Score = 35.8 bits (81), Expect = 0.18
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1556 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPS 1615

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1616 YSPTSPSYS------PTSPS 1629



Score = 35.0 bits (79), Expect = 0.30
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1605 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1664

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1665 YSPTSPSYS------PTSPS 1678



Score = 34.7 bits (78), Expect = 0.39
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASF----PFFAP-SPSRASTSSKICST--IFGISSPF 93
TS + SPTSP++S S S S S+ PF++P SPS + TS T + +SP
Sbjct: 1570 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1629

Query: 92 WAMTLKTFSFTSGIRSLMKFIMPLSPS 12
++ T ++S TS S P SPS
Sbjct: 1630 YSPTSPSYSPTSPSYS------PTSPS 1650



Score = 34.7 bits (78), Expect = 0.39
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1619 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1678

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1679 YSPTSPSYS------PSSPS 1692



Score = 33.9 bits (76), Expect = 0.67
Identities = 29/80 (36%), Positives = 39/80 (48%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP +S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1591 TSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1650

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1651 YSPTSPSYS------PTSPS 1664



Score = 33.9 bits (76), Expect = 0.67
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S +S S S + SSP ++ + T
Sbjct: 1654 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPT 1713

Query: 71 FS 66
F+
Sbjct: 1714 FT 1715



Score = 32.7 bits (73), Expect = 1.5
Identities = 28/82 (34%), Positives = 41/82 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + SSP ++ + +
Sbjct: 1640 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPS 1699

Query: 71 FSFTSGIRSLMKFIMPLSPSST 6
+S +S S P SP+ T
Sbjct: 1700 YSPSSPSYS------PSSPTFT 1715



Score = 31.6 bits (70), Expect = 3.3
Identities = 27/80 (33%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ + +
Sbjct: 1633 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPS 1692

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S +S S P SPS
Sbjct: 1693 YSPSSPSYS------PSSPS 1706


>sp|P35074|RPB1_CAEBR DNA-directed RNA polymerase II subunit RPB1
OS=Caenorhabditis briggsae GN=ama-1 PE=3 SV=2
Length = 1853

Score = 36.6 bits (83), Expect = 0.10
Identities = 26/65 (40%), Positives = 35/65 (53%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + SSP ++ T T
Sbjct: 1626 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPT 1685

Query: 71 FSFTS 57
+S TS
Sbjct: 1686 YSPTS 1690



Score = 35.8 bits (81), Expect = 0.18
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T T
Sbjct: 1633 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSPT 1692

Query: 71 FSFTSGIRS-LMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1693 YSPTSPTYSPTSPTYSPTSPS 1713



Score = 31.2 bits (69), Expect = 4.3
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = -1

Query: 236 SPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKTFSFTS 57
SPTSP++S S S S S+ +PS S S S S + +SP ++ T ++S +S
Sbjct: 1617 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSS 1676



Score = 30.8 bits (68), Expect = 5.6
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = -1

Query: 236 SPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKTFSFTS 57
SP SP++S S S S S+ +PS S S S S + +SP ++ T ++S TS
Sbjct: 1610 SPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1669



Score = 30.8 bits (68), Expect = 5.6
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS SPTSP +S S + S S+ ++PS + S SS S +SP ++ T
Sbjct: 1689 TSPTYSPTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPTYSP----TSPSYSPTSPQ 1744

Query: 71 FSFTS 57
+S TS
Sbjct: 1745 YSPTS 1749


>sp|Q75A34|RPB1_ASHGO DNA-directed RNA polymerase II subunit RPB1
OS=Ashbya gossypii GN=RPB1 PE=3 SV=1
Length = 1745

Score = 36.2 bits (82), Expect = 0.13
Identities = 30/80 (37%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS A SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1548 TSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1607

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1608 YSPTSPSYS------PTSPS 1621



Score = 35.0 bits (79), Expect = 0.30
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1562 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1621

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1622 YSPTSPSYS------PTSPS 1635



Score = 35.0 bits (79), Expect = 0.30
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1576 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1635

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1636 YSPTSPSYS------PTSPS 1649



Score = 35.0 bits (79), Expect = 0.30
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1590 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1649

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1650 YSPTSPSYS------PTSPS 1663



Score = 35.0 bits (79), Expect = 0.30
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1604 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1663

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1664 YSPTSPSYS------PTSPS 1677



Score = 35.0 bits (79), Expect = 0.30
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1618 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1677

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1678 YSPTSPSYS------PTSPS 1691



Score = 35.0 bits (79), Expect = 0.30
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1632 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1691

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1692 YSPTSPSYS------PTSPS 1705



Score = 34.7 bits (78), Expect = 0.39
Identities = 28/75 (37%), Positives = 37/75 (49%)
Frame = -1

Query: 236 SPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKTFSFTS 57
SPTSPA+S S S S S+ +PS S S S S + +SP ++ T ++S TS
Sbjct: 1546 SPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1605

Query: 56 GIRSLMKFIMPLSPS 12
S P SPS
Sbjct: 1606 PSYS------PTSPS 1614



Score = 34.3 bits (77), Expect = 0.51
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1646 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1705

Query: 71 FSFTS 57
+S TS
Sbjct: 1706 YSPTS 1710



Score = 34.3 bits (77), Expect = 0.51
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1653 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1712

Query: 71 FSFTS 57
+S TS
Sbjct: 1713 YSPTS 1717



Score = 31.6 bits (70), Expect = 3.3
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T
Sbjct: 1660 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQ 1719

Query: 71 FS 66
+S
Sbjct: 1720 YS 1721


>sp|P36594|RPB1_SCHPO DNA-directed RNA polymerase II subunit rpb1
OS=Schizosaccharomyces pombe GN=rpb1 PE=1 SV=1
Length = 1752

Score = 35.8 bits (81), Expect = 0.18
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1581 TSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1640

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1641 YSPTSPSYS------PTSPS 1654



Score = 35.8 bits (81), Expect = 0.18
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1595 TSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1654

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1655 YSPTSPSYS------PTSPS 1668



Score = 35.0 bits (79), Expect = 0.30
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1609 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1668

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1669 YSPTSPSYS------PTSPS 1682



Score = 35.0 bits (79), Expect = 0.30
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1623 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1682

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1683 YSPTSPSYS------PTSPS 1696



Score = 35.0 bits (79), Expect = 0.30
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1637 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1696

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1697 YSPTSPSYS------PTSPS 1710



Score = 35.0 bits (79), Expect = 0.30
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1651 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1710

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1711 YSPTSPSYS------PTSPS 1724



Score = 35.0 bits (79), Expect = 0.30
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1665 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1724

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1725 YSPTSPSYS------PTSPS 1738



Score = 35.0 bits (79), Expect = 0.30
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS + SPTSP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1679 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1738

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1739 YSPTSPSYS------PTSPS 1752



Score = 33.9 bits (76), Expect = 0.67
Identities = 27/75 (36%), Positives = 37/75 (49%)
Frame = -1

Query: 236 SPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKTFSFTS 57
SPTSP++S S S S S+ +PS S S S S + +SP ++ T ++S TS
Sbjct: 1579 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1638

Query: 56 GIRSLMKFIMPLSPS 12
S P SPS
Sbjct: 1639 PSYS------PTSPS 1647



Score = 33.5 bits (75), Expect = 0.87
Identities = 28/80 (35%), Positives = 39/80 (48%)
Frame = -1

Query: 251 TSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGISSPFWAMTLKT 72
TS A P+SP++S S S S S+ +PS S S S S + +SP ++ T +
Sbjct: 1567 TSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPS 1626

Query: 71 FSFTSGIRSLMKFIMPLSPS 12
+S TS S P SPS
Sbjct: 1627 YSPTSPSYS------PTSPS 1640



Score = 30.8 bits (68), Expect = 5.6
Identities = 29/91 (31%), Positives = 39/91 (42%)
Frame = -1

Query: 284 PTINLMGISLCTSCADSPTSPAFSLASCSTSSLIASFPFFAPSPSRASTSSKICSTIFGI 105
P L S S TSPA+ +S S S S+ +PS S S S S +
Sbjct: 1549 PGYGLTSPSYSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSA 1608

Query: 104 SSPFWAMTLKTFSFTSGIRSLMKFIMPLSPS 12
+SP ++ T ++S TS S P SPS
Sbjct: 1609 TSPSYSPTSPSYSPTSPSYS------PTSPS 1633


tr_hit_id A9RX89
Definition tr|A9RX89|A9RX89_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 139
Score (bit) 89.7
E-value 4.0e-29
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913173|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_C12.
(608 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9RX89|A9RX89_PHYPA Predicted protein OS=Physcomitrella paten... 90 4e-29
tr|A9SDF6|A9SDF6_PHYPA Predicted protein OS=Physcomitrella paten... 97 7e-29
tr|A7PD17|A7PD17_VITVI Chromosome chr17 scaffold_12, whole genom... 66 3e-17
tr|A5APW2|A5APW2_VITVI Putative uncharacterized protein OS=Vitis... 65 2e-14
tr|A7QM35|A7QM35_VITVI Chromosome undetermined scaffold_123, who... 65 2e-14
tr|B7ZZV3|B7ZZV3_MAIZE Putative uncharacterized protein OS=Zea m... 54 4e-09
tr|Q9SXD0|Q9SXD0_ARATH T17H3.1 protein (Fragment) OS=Arabidopsis... 65 4e-09
tr|Q94AT5|Q94AT5_ARATH Putative uncharacterized protein At1g2751... 65 4e-09
tr|A2WJS5|A2WJS5_ORYSI Putative uncharacterized protein OS=Oryza... 48 1e-07
tr|Q657X6|Q657X6_ORYSJ cDNA clone:J023047F20, full insert sequen... 47 2e-07
tr|A9S7T0|A9S7T0_PHYPA Predicted protein (Fragment) OS=Physcomit... 54 7e-06
tr|Q8IIG7|Q8IIG7_PLAF7 Putative uncharacterized protein OS=Plasm... 42 0.021
tr|Q5CYR5|Q5CYR5_CRYPV Putative uncharacterized protein OS=Crypt... 41 0.062
tr|Q8L630|Q8L630_ARATH Putative uncharacterized protein At1g2751... 40 0.080
tr|Q5BF71|Q5BF71_EMENI DNA-directed RNA polymerase OS=Emericella... 40 0.080
tr|B6H9U6|B6H9U6_PENCH Pc16g13990 protein OS=Penicillium chrysog... 40 0.080
tr|Q9HGZ5|Q9HGZ5_ASPOR DNA-directed RNA polymerase OS=Aspergillu... 40 0.11
tr|B8N404|B8N404_ASPFL DNA-dependent RNA polymerase II largest s... 40 0.11
tr|A2QAT7|A2QAT7_ASPNC DNA-directed RNA polymerase OS=Aspergillu... 40 0.14
tr|Q4WRY3|Q4WRY3_ASPFU DNA-directed RNA polymerase OS=Aspergillu... 39 0.18
tr|Q0D054|Q0D054_ASPTN DNA-directed RNA polymerase OS=Aspergillu... 39 0.18
tr|B0XMU6|B0XMU6_ASPFC DNA-directed RNA polymerase OS=Aspergillu... 39 0.18
tr|A1D1U9|A1D1U9_NEOFI DNA-directed RNA polymerase OS=Neosartory... 39 0.18
tr|A1CNZ4|A1CNZ4_ASPCL DNA-directed RNA polymerase OS=Aspergillu... 39 0.18
tr|Q4QZ03|Q4QZ03_SOLTU DNA-directed RNA polymerase (Fragment) OS... 39 0.31
tr|A0JRM5|A0JRM5_ARTS2 DNA ligase (ATP) OS=Arthrobacter sp. (str... 38 0.40
tr|B8M2Y2|B8M2Y2_9EURO DNA-dependent RNA polymerase II largest s... 38 0.40
tr|Q99368|Q99368_SOYBN DNA-directed RNA polymerase (Fragment) OS... 38 0.52
tr|A7RVA8|A7RVA8_NEMVE Predicted protein OS=Nematostella vectens... 38 0.52
tr|B6KTW2|B6KTW2_TOXGO Putative uncharacterized protein OS=Toxop... 37 0.68

>tr|A9RX89|A9RX89_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_121059 PE=4 SV=1
Length = 588

Score = 89.7 bits (221), Expect(2) = 4e-29
Identities = 55/139 (39%), Positives = 78/139 (56%), Gaps = 11/139 (7%)
Frame = +1

Query: 10 DDGLNGIINFIKDRIPDVKLKVFRVIAQNGEDIPKIVEQILEEVDARDGEGAKKGNEAIN 189
D+ L+ I++F+KDR+PDVKLKVF+ DIPKIVEQ++ + D+ + + N
Sbjct: 221 DEPLSRIVSFLKDRMPDVKLKVFK-------DIPKIVEQLMGQEDSISSKQQDLPEASTN 273

Query: 190 EEVLQEAKEKAG-----------DVGESAQEVQREIPIRLIVGGTLQSASDDKLQKAPIR 336
EK G VG EV++E PIRL+VGG LQ+ D + K P+R
Sbjct: 274 NTNSNNTSEKKGLSSKFPLDGKIPVG-GIGEVEKETPIRLVVGGILQNNVDSEPPKLPVR 332

Query: 337 RRARIENQSKDSFLLHIDE 393
ARIE Q ++SF HI++
Sbjct: 333 VPARIERQGRNSFTFHIED 351



Score = 62.4 bits (150), Expect(2) = 4e-29
Identities = 27/45 (60%), Positives = 39/45 (86%)
Frame = +3

Query: 474 LPSDISKVVSNLDKVPVKVSKDMGELLKIAISQVQRRRGLSKCTS 608
+P D++KV+ N++KVPVKVSK+MGE++K+A+SQ QRRRGL T+
Sbjct: 383 MPDDVAKVLWNVEKVPVKVSKEMGEIIKLAVSQAQRRRGLFPSTN 427


>tr|A9SDF6|A9SDF6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_183711 PE=4 SV=1
Length = 638

Score = 97.4 bits (241), Expect(2) = 7e-29
Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 16/146 (10%)
Frame = +1

Query: 4 VVDDGLNGIINFIKDRIPDVKLKVFRVIAQNGED--IPKIVEQILEEVDA-----RDGEG 162
++D+ L+ I++F+KDRIPDVKLKVF+VIA G D +PKIVEQ++E+ D+ +D
Sbjct: 262 ILDEPLSKIMSFLKDRIPDVKLKVFKVIAPEGADAELPKIVEQLMEQEDSSSSKQQDLSE 321

Query: 163 AKKGNEAINEEVLQ---------EAKEKAGDVGESAQEVQREIPIRLIVGGTLQSASDDK 315
A N IN + + K G +GE ++E+ IRL+VGG LQ+ D +
Sbjct: 322 ASTSNTNINSATEKKGLGSKFPLDGKIPVGGIGED----EKEMSIRLVVGGVLQNNIDSE 377

Query: 316 LQKAPIRRRARIENQSKDSFLLHIDE 393
K P+R ARIE++ +++F HI++
Sbjct: 378 PSKLPVRVPARIEHKGQNAFTFHIED 403



Score = 53.9 bits (128), Expect(2) = 7e-29
Identities = 23/45 (51%), Positives = 36/45 (80%)
Frame = +3

Query: 474 LPSDISKVVSNLDKVPVKVSKDMGELLKIAISQVQRRRGLSKCTS 608
+ D++KV+ N++ VPVKVSK+M E++++A+SQ QRRRGL T+
Sbjct: 433 MADDVAKVLWNVETVPVKVSKEMSEIIRVAVSQAQRRRGLFTSTN 477


>tr|A7PD17|A7PD17_VITVI Chromosome chr17 scaffold_12, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00016102001
PE=4 SV=1
Length = 656

Score = 66.2 bits (160), Expect(2) = 3e-17
Identities = 35/131 (26%), Positives = 74/131 (56%), Gaps = 5/131 (3%)
Frame = +1

Query: 10 DDGLNGIINFIKDRIPDVKLKVFRV-----IAQNGEDIPKIVEQILEEVDARDGEGAKKG 174
++G+ +INF+KD+IP++K+KV ++ + ++G+ V+Q ++E D +
Sbjct: 295 EEGIKSVINFLKDKIPELKVKVMKINVPDEVIEDGDS----VKQFMQEDDEKTQSSEDSE 350

Query: 175 NEAINEEVLQEAKEKAGDVGESAQEVQREIPIRLIVGGTLQSASDDKLQKAPIRRRARIE 354
+EA + + +Q + G +A++ Q + ++L +GG L + D + +R+ A I
Sbjct: 351 DEADDLDKIQPDEVALGGGSNTAEDGQN-LDMKLFIGGVLHNKEDTSSKDDYVRQPAEIR 409

Query: 355 NQSKDSFLLHI 387
+ +DSF+LH+
Sbjct: 410 DMERDSFVLHV 420



Score = 46.2 bits (108), Expect(2) = 3e-17
Identities = 21/45 (46%), Positives = 34/45 (75%)
Frame = +3

Query: 474 LPSDISKVVSNLDKVPVKVSKDMGELLKIAISQVQRRRGLSKCTS 608
+PS+++K + DKV KVS+D+ E++K+A+SQ Q+R LS+ TS
Sbjct: 451 MPSEVAKAFWSADKVSPKVSRDVREIVKLAVSQAQKRNRLSEHTS 495


>tr|A5APW2|A5APW2_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_020408 PE=4 SV=1
Length = 830

Score = 64.7 bits (156), Expect(2) = 2e-14
Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 9/135 (6%)
Frame = +1

Query: 13 DGLNGIINFIKDRIPDVKLKVFRVIAQNGED---IPKIVEQILEEVDARDGEGAKKGNEA 183
+GL+G N ++D IP VK+KV +V A D I K++EQI+EE + D + + +
Sbjct: 470 EGLSGFRNILRDMIPGVKVKVLKVTAPGKVDRDLISKVIEQIMEEEE--DEQDIELESVE 527

Query: 184 INEEVLQEAKEKAGDVGESA------QEVQREIPIRLIVGGTLQSASDDKLQKAPIRRRA 345
EEV E+ ++ ++ A +E Q EI +++ VGG +Q S K +R A
Sbjct: 528 TEEEVKVESDQEQDEIEMEAGHGIIDREEQNEIAVKVFVGGLVQKLSAGVPSKKLLRVPA 587

Query: 346 RIENQSKDSFLLHID 390
R+E + + SF I+
Sbjct: 588 RLEKKGRMSFSFSIE 602



Score = 37.7 bits (86), Expect(2) = 2e-14
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +3

Query: 483 DISKVVSNLDKVPVKVSKDMGELLKIAISQVQRRRGLSKCTS 608
D++K + +K+P+KV KD+GEL+ + +SQ R+ LS T+
Sbjct: 636 DLAKFIGR-EKIPMKVLKDVGELINLTLSQAHNRQPLSGSTT 676


>tr|A7QM35|A7QM35_VITVI Chromosome undetermined scaffold_123, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00001897001 PE=4 SV=1
Length = 702

Score = 64.7 bits (156), Expect(2) = 2e-14
Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 9/135 (6%)
Frame = +1

Query: 13 DGLNGIINFIKDRIPDVKLKVFRVIAQNGED---IPKIVEQILEEVDARDGEGAKKGNEA 183
+GL+G N ++D IP VK+KV +V A D I K++EQI+EE + D + + +
Sbjct: 339 EGLSGFRNILRDMIPGVKVKVLKVTAPGKVDRDLISKVIEQIMEEEE--DEQDIELESVE 396

Query: 184 INEEVLQEAKEKAGDVGESA------QEVQREIPIRLIVGGTLQSASDDKLQKAPIRRRA 345
EEV E+ ++ ++ A +E Q EI +++ VGG +Q S K +R A
Sbjct: 397 TEEEVKVESDQEQDEIEMEAGHGIIDREEQNEIAVKVFVGGLVQKLSAGVPSKKLLRVPA 456

Query: 346 RIENQSKDSFLLHID 390
R+E + + SF I+
Sbjct: 457 RLEKKGRMSFSFSIE 471



Score = 37.7 bits (86), Expect(2) = 2e-14
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +3

Query: 483 DISKVVSNLDKVPVKVSKDMGELLKIAISQVQRRRGLSKCTS 608
D++K + +K+P+KV KD+GEL+ + +SQ R+ LS T+
Sbjct: 505 DLAKFIGR-EKIPMKVLKDVGELINLTLSQAHNRQPLSGSTT 545


>tr|B7ZZV3|B7ZZV3_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 627

Score = 53.5 bits (127), Expect(2) = 4e-09
Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
Frame = +1

Query: 13 DGLNGIINFIKDRIPDVKLKVFRV-IAQNGEDIPKIVEQILEEVDARDGEGAKKGNEAIN 189
+GL ++NF K RIP+ K++V V +A+ E E++++ + K E+
Sbjct: 281 EGLKSVLNFFKSRIPEFKVQVINVDVAEETELAANSSEELVQ-------DDVKSTPESSL 333

Query: 190 EEVLQEAKEKAGDV-GESAQEVQREIPIRLIVGGTLQSASDDKLQKAPIRRRARIENQSK 366
EE E E+ DV E+ E + ++L + G + + +D K+ +R A I N K
Sbjct: 334 EEPATEELEQEEDVPEENTDEESKSTEVKLFISGVVHN-KEDAGAKSYVRVPAEINNMEK 392

Query: 367 DSFLLHI 387
DSF L+I
Sbjct: 393 DSFELYI 399



Score = 31.2 bits (69), Expect(2) = 4e-09
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = +3

Query: 399 ETSAHKRVVAAGESLFSCNALTSTELPSDISKVVSNLDKVPVKVSKDMGELLKIAISQVQ 578
ET A K+ VA + L S +PSD++K + K K++K++ ELL++ +S+ +
Sbjct: 410 ETKAAKQKVADMAA-----KLASELMPSDVAKALWGTAKSSSKINKEVQELLRLTLSKAR 464


>tr|Q9SXD0|Q9SXD0_ARATH T17H3.1 protein (Fragment) OS=Arabidopsis
thaliana GN=T17H3.1 PE=4 SV=1
Length = 568

Score = 64.7 bits (156), Expect = 4e-09
Identities = 40/131 (30%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Frame = +1

Query: 10 DDGLNGIINFIKDRIPDVKLKVFRVIAQNGEDIPKIVEQILEEVDARD---GEGAKKGNE 180
++G+ +I F+KD+IP +KLKV VI IP+ E+I+ DA + GEG ++ N
Sbjct: 293 EEGIKNVIKFLKDKIPGLKLKVMDVI-----KIPE--EEIVGSDDATEELVGEGTEETNS 345

Query: 181 AINEEVLQEAKEKAGDVGES--AQEVQREIPIRLIVGGTLQSASDDKLQKAPIRRRARIE 354
+ +EE ++E + + + S + + + +L++GG L + D + +R A I
Sbjct: 346 SDDEEEVEEEENDSIEAISSMDSADYGKHSNTKLVIGGVLHNIEDSSIDDEIVRVSANIM 405

Query: 355 NQSKDSFLLHI 387
+ +DSF+LH+
Sbjct: 406 DTERDSFILHV 416


>tr|Q94AT5|Q94AT5_ARATH Putative uncharacterized protein At1g27510
OS=Arabidopsis thaliana GN=At1g27510 PE=2 SV=1
Length = 651

Score = 64.7 bits (156), Expect = 4e-09
Identities = 40/131 (30%), Positives = 73/131 (55%), Gaps = 5/131 (3%)
Frame = +1

Query: 10 DDGLNGIINFIKDRIPDVKLKVFRVIAQNGEDIPKIVEQILEEVDARD---GEGAKKGNE 180
++G+ +I F+KD+IP +KLKV VI IP+ E+I+ DA + GEG ++ N
Sbjct: 293 EEGIKNVIKFLKDKIPGLKLKVMDVI-----KIPE--EEIVGSDDATEELVGEGTEETNS 345

Query: 181 AINEEVLQEAKEKAGDVGES--AQEVQREIPIRLIVGGTLQSASDDKLQKAPIRRRARIE 354
+ +EE ++E + + + S + + + +L++GG L + D + +R A I
Sbjct: 346 SDDEEEVEEEENDSIEAISSMDSADYGKHSNTKLVIGGVLHNIEDSSIDDEIVRVSANIM 405

Query: 355 NQSKDSFLLHI 387
+ +DSF+LH+
Sbjct: 406 DTERDSFILHV 416


>tr|A2WJS5|A2WJS5_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_00074 PE=4 SV=1
Length = 625

Score = 47.8 bits (112), Expect(2) = 1e-07
Identities = 35/125 (28%), Positives = 62/125 (49%)
Frame = +1

Query: 13 DGLNGIINFIKDRIPDVKLKVFRVIAQNGEDIPKIVEQILEEVDARDGEGAKKGNEAINE 192
+GL ++NF K RIP+ K++V V ++ + L + D + ++ E
Sbjct: 278 EGLKSVLNFFKSRIPEFKVQVINVDVSEEAELASDSSEELVQDDVK--STSENSLEDSTT 335

Query: 193 EVLQEAKEKAGDVGESAQEVQREIPIRLIVGGTLQSASDDKLQKAPIRRRARIENQSKDS 372
E LQ+ GD +SA++ + ++L + G + + +D K+ +R A I N KDS
Sbjct: 336 EELQQDDVPDGD-SDSAED-SKSTEMKLFISGVVHN-KEDAGAKSYVRVPAEINNLEKDS 392

Query: 373 FLLHI 387
F L+I
Sbjct: 393 FELYI 397



Score = 32.0 bits (71), Expect(2) = 1e-07
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +3

Query: 459 LTSTELPSDISKVVSNLDKVPVKVSKDMGELLKIAISQVQ 578
L S +PSD++K + K K++K++ ELLK+ +S+ +
Sbjct: 423 LASELMPSDVAKALWGTTKSSSKINKEVQELLKLTLSKAR 462


>tr|Q657X6|Q657X6_ORYSJ cDNA clone:J023047F20, full insert sequence
OS=Oryza sativa subsp. japonica GN=P0005A05.36 PE=2 SV=1
Length = 627

Score = 47.0 bits (110), Expect(2) = 2e-07
Identities = 35/125 (28%), Positives = 62/125 (49%)
Frame = +1

Query: 13 DGLNGIINFIKDRIPDVKLKVFRVIAQNGEDIPKIVEQILEEVDARDGEGAKKGNEAINE 192
+GL ++NF K RIP+ K++V V ++ + L + D + ++ E
Sbjct: 280 EGLKSVLNFFKSRIPEFKVQVINVDVSEEAELASDSSEELVQDDVK--STSENSLEDSTT 337

Query: 193 EVLQEAKEKAGDVGESAQEVQREIPIRLIVGGTLQSASDDKLQKAPIRRRARIENQSKDS 372
E LQ+ GD +SA++ + ++L + G + + +D K+ +R A I N KDS
Sbjct: 338 EELQQDDVPDGD-SDSAED-SKSPEMKLFISGVVHN-KEDAGAKSYVRVPAEINNLEKDS 394

Query: 373 FLLHI 387
F L+I
Sbjct: 395 FELYI 399



Score = 32.0 bits (71), Expect(2) = 2e-07
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +3

Query: 459 LTSTELPSDISKVVSNLDKVPVKVSKDMGELLKIAISQVQ 578
L S +PSD++K + K K++K++ ELLK+ +S+ +
Sbjct: 425 LASELMPSDVAKALWGTTKSSSKINKEVQELLKLTLSKAR 464