BP913176
Clone id YMU001_000027_D04
Library
Length 510
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000027_D04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATCACAGACAAATACAACCTTTATGCCTCAATTGTTGTCAACTTTACACACACAACTCCA
ATGCACCTCCATTAGCAGCCATTTTTTGTGAAAATGGGCATTATAAGGGGCTGCAAGTTC
CCTGCCCCTTTGAGTTAGATGTGATTTGTTTCATCGCCATCCATACAATAATATCTGGGG
CCAGAAACCACATGGGATGTACATGGTTCCTTGCTTGCTTTTGACCTCTCAACAGCAAAG
CCCATTTATTACAAATGATAGCAGCCTGACAAAGTAATATGTGAACAATGCGGCAAGTAT
GCTCCCCAAGGAGCGTCCATCACTCTCAGTTCATATGTTAGCTCACTTTTCTCCACTAAT
CTACGAAGTGGTTGATCCTTATTTTTACAAAATTTCCTTCATTTACCATGTAAATAATTA
AGAAGCTTTAAACTTTTGAGAGAGCTTCTCAGCTCCTCCCTTCCATTCATCAATGGCTTT
CAAACTTGCTTCTTTTAGGCTTGAGCTCAA
■■Homology search results ■■ -
sp_hit_id Q8GQC5
Definition sp|Q8GQC5|GLGB_ERWCH 1,4-alpha-glucan-branching enzyme OS=Erwinia chrysanthemi
Align length 76
Score (bit) 31.6
E-value 2.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913176|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_D04.
(510 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8GQC5|GLGB_ERWCH 1,4-alpha-glucan-branching enzyme OS=Erwini... 32 2.3
sp|Q9FWW7|FBK1_ARATH Putative F-box/Kelch-repeat protein At1g121... 31 3.9
sp|Q93212|SOL1_CAEEL Suppressor of lurcher protein 1 OS=Caenorha... 30 8.5

>sp|Q8GQC5|GLGB_ERWCH 1,4-alpha-glucan-branching enzyme OS=Erwinia
chrysanthemi GN=glgB PE=1 SV=1
Length = 731

Score = 31.6 bits (70), Expect = 2.3
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +2

Query: 152 HRHPYNNIWGQKPHGMYMVPCLLLTSQQQSPFITNDSSLTK*YVNNAASMLPKERPSLSV 331
H+HP++ WG +P G+Y P S ++ S+ + +N + P+ S
Sbjct: 294 HKHPFDGSWGYQPLGLY-APTRRFGSPDDFRYLV--SAFHEAGINVLLDWVSGHFPADSY 350

Query: 332 HMLAHFSPLIYEVVDP 379
+ P +YE DP
Sbjct: 351 GLARFDGPALYEYADP 366


>sp|Q9FWW7|FBK1_ARATH Putative F-box/Kelch-repeat protein At1g12170
OS=Arabidopsis thaliana GN=At1g12170 PE=4 SV=1
Length = 363

Score = 30.8 bits (68), Expect = 3.9
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = -3

Query: 319 WTLLGEHTCRIVHILLCQAAIICNKWALLLRGQKQARNH---VHPMWFLAPDIIVWMAMK 149
W L+ E R+ + L + I+C +W L + + NH V P + L D ++
Sbjct: 7 WELVEEILYRVPPLSLTRFKIVCKQWNTLFKSKSFVNNHLVRVRPQFLLWTDSKMYSVSV 66

Query: 148 QITSNSKGQGTCSPL*CPF 92
+ + K PL P+
Sbjct: 67 NLNDDQKIDMRELPLDIPY 85


>sp|Q93212|SOL1_CAEEL Suppressor of lurcher protein 1
OS=Caenorhabditis elegans GN=sol-1 PE=1 SV=3
Length = 594

Score = 29.6 bits (65), Expect = 8.5
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1

Query: 289 CGKYAPQGASITLSSYVSSLFSTN 360
CGK AP+G ++ S+Y +FSTN
Sbjct: 516 CGKTAPKGPILSESNYFRMIFSTN 539


tr_hit_id B0TXM3
Definition tr|B0TXM3|B0TXM3_FRAP2 WblP protein OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017)
Align length 79
Score (bit) 33.1
E-value 8.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913176|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_D04.
(510 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B0TXM3|B0TXM3_FRAP2 WblP protein OS=Francisella philomiragia ... 33 8.1

>tr|B0TXM3|B0TXM3_FRAP2 WblP protein OS=Francisella philomiragia
subsp. philomiragia (strain ATCC 25017) GN=Fphi_1256
PE=4 SV=1
Length = 135

Score = 33.1 bits (74), Expect = 8.1
Identities = 22/79 (27%), Positives = 38/79 (48%)
Frame = -1

Query: 270 VRLLSFVINGLCC*EVKSKQGTMYIPCGFWPQILLYGWR*NKSHLTQRGRELAAPYNAHF 91
+RLL+F + G ++ + +G +P +YG + RG+ +AH+
Sbjct: 3 IRLLNFEVRGDERGQLVALEGNKNVPLDIKRVFYIYGTKVG----IPRGQ------HAHY 52

Query: 90 HKKWLLMEVHWSCVCKVDN 34
H K LL+ +H SC +DN
Sbjct: 53 HTKQLLVAIHGSCKVTLDN 71