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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913179
Clone id YMU001_000027_D07
Library
Length 583
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000027_D07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGATTGAAGACACAGACCAGAAGATAAAATAGATGAGGCGGTGTGAGGTACATCGAGACC
AAGCTAGAAAGTATTATACACCATGGTAAAGCAAGACTAACCGTCTTGCCAAACACCACA
TAAACAAAACGTGCTTACTGCAGCATGATGACCTCTTGCATGGTAAGCCTGGAAACCGGA
AGCATCTTGAAAAACTGTCTAAAGAACCTCATTCTGTGAGTGTCTTCAGTAAAAGCCCAG
AGACATGTCTATGCTTCATGCAAAAAGCTCTTTGCTAGCCACTTGCAGTGGTGAGAACCC
TTACTCAGTTCCTTCCTCACCAAGCCCTTAACTCCTCAAGGCGTGAAAGTGCTCTCTCCA
GCTCCATGTTGAGATTTCTCAACTCAAGATGCTGAAGTTCATGTTGCTGCTGCAGCTGCT
CTTTCAGATCATCAACATCTACCACGAGTGCCTCAATACTCAGTTGGAGAGAATCTATTT
GCTGCTTTGCCACCGAAAATCTGTCTCCTTCTGACAAATCACTGCACATATTGTCAACTA
GGCCATCTGTCACATCATCAACCACCGCAATTGTGGGTATGCT
■■Homology search results ■■ -
sp_hit_id Q31V29
Definition sp|Q31V29|MTLD_SHIBS Mannitol-1-phosphate 5-dehydrogenase OS=Shigella boydii serotype 4 (strain Sb227)
Align length 41
Score (bit) 31.6
E-value 3.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913179|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_D07.
         (583 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q31V29|MTLD_SHIBS Mannitol-1-phosphate 5-dehydrogenase OS=Shi...    32   3.0  
sp|P19706|MYSB_ACACA Myosin heavy chain IB OS=Acanthamoeba caste...    31   5.2  
sp|Q3YVW2|MTLD_SHISS Mannitol-1-phosphate 5-dehydrogenase OS=Shi...    31   5.2  
sp|Q83PQ0|MTLD_SHIFL Mannitol-1-phosphate 5-dehydrogenase OS=Shi...    31   5.2  
sp|Q8ZL67|MTLD_SALTY Mannitol-1-phosphate 5-dehydrogenase OS=Sal...    31   5.2  
sp|Q8Z2E0|MTLD_SALTI Mannitol-1-phosphate 5-dehydrogenase OS=Sal...    31   5.2  
sp|A9MVI4|MTLD_SALPB Mannitol-1-phosphate 5-dehydrogenase OS=Sal...    31   5.2  
sp|Q5PLR3|MTLD_SALPA Mannitol-1-phosphate 5-dehydrogenase OS=Sal...    31   5.2  
sp|P09424|MTLD_ECOLI Mannitol-1-phosphate 5-dehydrogenase OS=Esc...    31   5.2  
sp|B1IZJ2|MTLD_ECOLC Mannitol-1-phosphate 5-dehydrogenase OS=Esc...    31   5.2  
sp|Q8FCB7|MTLD_ECOL6 Mannitol-1-phosphate 5-dehydrogenase OS=Esc...    31   5.2  
sp|A8A660|MTLD_ECOHS Mannitol-1-phosphate 5-dehydrogenase OS=Esc...    31   5.2  
sp|Q8XDG9|MTLD_ECO57 Mannitol-1-phosphate 5-dehydrogenase OS=Esc...    31   5.2  
sp|A7ZTE9|MTLD_ECO24 Mannitol-1-phosphate 5-dehydrogenase OS=Esc...    31   5.2  
sp|Q9XBM6|MTLD_KLEPN Mannitol-1-phosphate 5-dehydrogenase OS=Kle...    30   6.7  
sp|A6TFJ4|MTLD_KLEP7 Mannitol-1-phosphate 5-dehydrogenase OS=Kle...    30   6.7  

>sp|Q31V29|MTLD_SHIBS Mannitol-1-phosphate 5-dehydrogenase
           OS=Shigella boydii serotype 4 (strain Sb227) GN=mtlD
           PE=3 SV=1
          Length = 382

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 439 LPRVPQYSVGENLFAALPPKICLLLTNHCTYCQLGHLSHHQ 561
           LP +P   + +NL A +  K+  L T H     LG L+ HQ
Sbjct: 193 LPNIPSMELTDNLMAFVERKLFTLNTGHAITAYLGKLAGHQ 233


>sp|P19706|MYSB_ACACA Myosin heavy chain IB OS=Acanthamoeba
           castellanii GN=MIB PE=1 SV=2
          Length = 1147

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 460 SVGENLFAALP-PKICLLLTNHCTYCQLGHLSHHQPPQLW 576
           ++G  L +  P  +I  LLT+ C +C  G   H QPP ++
Sbjct: 41  NIGPVLISVNPFRRIDALLTDECLHCYRGRYQHEQPPHVY 80


>sp|Q3YVW2|MTLD_SHISS Mannitol-1-phosphate 5-dehydrogenase
           OS=Shigella sonnei (strain Ss046) GN=mtlD PE=3 SV=1
          Length = 382

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 439 LPRVPQYSVGENLFAALPPKICLLLTNHCTYCQLGHLSHHQ 561
           LP +P   + +NL A +  K+  L T H     LG L+ HQ
Sbjct: 193 LPNIPGMELTDNLMAFVERKLFTLNTGHAITAYLGKLAGHQ 233


>sp|Q83PQ0|MTLD_SHIFL Mannitol-1-phosphate 5-dehydrogenase
           OS=Shigella flexneri GN=mtlD PE=3 SV=2
          Length = 382

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 439 LPRVPQYSVGENLFAALPPKICLLLTNHCTYCQLGHLSHHQ 561
           LP +P   + +NL A +  K+  L T H     LG L+ HQ
Sbjct: 193 LPNIPGMELTDNLMAFVERKLFTLNTGHAITAYLGKLAGHQ 233


>sp|Q8ZL67|MTLD_SALTY Mannitol-1-phosphate 5-dehydrogenase
           OS=Salmonella typhimurium GN=mtlD PE=3 SV=1
          Length = 382

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 439 LPRVPQYSVGENLFAALPPKICLLLTNHCTYCQLGHLSHHQ 561
           LP +P   + +NL A +  K+  L T H     LG L+ HQ
Sbjct: 193 LPNIPGMELTDNLMAFVERKLFTLNTGHAITAYLGKLAGHQ 233


>sp|Q8Z2E0|MTLD_SALTI Mannitol-1-phosphate 5-dehydrogenase
           OS=Salmonella typhi GN=mtlD PE=3 SV=1
          Length = 382

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 439 LPRVPQYSVGENLFAALPPKICLLLTNHCTYCQLGHLSHHQ 561
           LP +P   + +NL A +  K+  L T H     LG L+ HQ
Sbjct: 193 LPNIPGMELTDNLMAFVERKLFTLNTGHAITAYLGKLAGHQ 233


>sp|A9MVI4|MTLD_SALPB Mannitol-1-phosphate 5-dehydrogenase
           OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
           GN=mtlD PE=3 SV=1
          Length = 382

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 439 LPRVPQYSVGENLFAALPPKICLLLTNHCTYCQLGHLSHHQ 561
           LP +P   + +NL A +  K+  L T H     LG L+ HQ
Sbjct: 193 LPNIPGMELTDNLMAFVERKLFTLNTGHAITAYLGKLAGHQ 233


>sp|Q5PLR3|MTLD_SALPA Mannitol-1-phosphate 5-dehydrogenase
           OS=Salmonella paratyphi A GN=mtlD PE=3 SV=1
          Length = 382

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 439 LPRVPQYSVGENLFAALPPKICLLLTNHCTYCQLGHLSHHQ 561
           LP +P   + +NL A +  K+  L T H     LG L+ HQ
Sbjct: 193 LPNIPGMELTDNLMAFVERKLFTLNTGHAITAYLGKLAGHQ 233


>sp|P09424|MTLD_ECOLI Mannitol-1-phosphate 5-dehydrogenase
           OS=Escherichia coli (strain K12) GN=mtlD PE=1 SV=3
          Length = 382

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 439 LPRVPQYSVGENLFAALPPKICLLLTNHCTYCQLGHLSHHQ 561
           LP +P   + +NL A +  K+  L T H     LG L+ HQ
Sbjct: 193 LPNIPGMELTDNLMAFVERKLFTLNTGHAITAYLGKLAGHQ 233


>sp|B1IZJ2|MTLD_ECOLC Mannitol-1-phosphate 5-dehydrogenase
           OS=Escherichia coli (strain ATCC 8739 / DSM 1576 /
           Crooks) GN=mtlD PE=3 SV=1
          Length = 382

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 439 LPRVPQYSVGENLFAALPPKICLLLTNHCTYCQLGHLSHHQ 561
           LP +P   + +NL A +  K+  L T H     LG L+ HQ
Sbjct: 193 LPNIPGMELTDNLMAFVERKLFTLNTGHAITAYLGKLAGHQ 233
tr_hit_id Q7RYU1
Definition tr|Q7RYU1|Q7RYU1_NEUCR Predicted protein OS=Neurospora crassa
Align length 54
Score (bit) 33.9
E-value 6.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913179|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_D07.
         (583 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q7RYU1|Q7RYU1_NEUCR Predicted protein OS=Neurospora crassa GN...    34   6.8  
tr|A7SRY6|A7SRY6_NEMVE Predicted protein OS=Nematostella vectens...    33   9.0  

>tr|Q7RYU1|Q7RYU1_NEUCR Predicted protein OS=Neurospora crassa
           GN=NCU00367 PE=4 SV=1
          Length = 969

 Score = 33.9 bits (76), Expect = 6.8
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +3

Query: 51  HRDQARKYYTPW*SKTNRLAKHHINKTCLLQHDDLLHGKPGNRKHLEKLSKEPH 212
           HR  +R Y+ P      R  K++  K     HD   H +P N +H   L K+PH
Sbjct: 397 HRPASRDYHRPEEHNAPRTDKYNPQKYHQASHD---HSRPQNPQHSSHLQKDPH 447


>tr|A7SRY6|A7SRY6_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g216514 PE=4 SV=1
          Length = 635

 Score = 33.5 bits (75), Expect = 9.0
 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
 Frame = -1

Query: 565 VVDDVTDGLVDNMCSDLSEGDRFSVAKQQIDSLQLS-----IEALVVDVDD 428
           VVDDV DGL+ ++  D+ EG  F V    I+ L L      I  LV+DV D
Sbjct: 198 VVDDVIDGLMLDVVDDVIEGLMFDVVDDVIEGLVLDVVDDVIVGLVLDVVD 248