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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913182
Clone id YMU001_000027_D10
Library
Length 146
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000027_D10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ATATTGACATTTACCTCGAGCCCCTCATTGAGGATCTGGAGGACTTATGGAGAAGCATTC
CTGTTGTCGATGTCTTACTTGCAAAGGGGGGGAGAGTGGCTCAAGTGACGGGAATCCATA
TGTGGACTATGCACGACTATCCTGAG
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913182|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_D10.
         (146 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id Q7G4N7
Definition tr|Q7G4N7|Q7G4N7_ORYSJ Transposon protein, putative, CACTA, En/Spm sub-class OS=Oryza sativa subsp. japonica
Align length 47
Score (bit) 48.9
E-value 0.0001
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913182|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_D10.
         (146 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q7G4N7|Q7G4N7_ORYSJ Transposon protein, putative, CACTA, En/S...    49   1e-04
tr|Q53QR1|Q53QR1_ORYSJ Transposase family tnp2, putative OS=Oryz...    49   1e-04
tr|Q2QQ61|Q2QQ61_ORYSJ Transposon protein, putative, CACTA, En/S...    47   4e-04
tr|Q0E2G9|Q0E2G9_ORYSJ Os02g0241500 protein OS=Oryza sativa subs...    44   0.004
tr|Q0P1B0|Q0P1B0_ORYSI Transposase (Fragment) OS=Oryza sativa su...    43   0.007
tr|Q0J7A0|Q0J7A0_ORYSJ Os08g0208400 protein OS=Oryza sativa subs...    43   0.007
tr|Q7XKK8|Q7XKK8_ORYSJ OSJNBb0061C13.11 protein OS=Oryza sativa ...    42   0.012
tr|Q0E017|Q0E017_ORYSJ Os02g0583300 protein OS=Oryza sativa subs...    42   0.012
tr|Q0DD95|Q0DD95_ORYSJ Os06g0240700 protein OS=Oryza sativa subs...    42   0.012
tr|Q04219|Q04219_ANTMA TNP2 (Fragment) OS=Antirrhinum majus GN=T...    41   0.027
tr|Q9SPU5|Q9SPU5_MAIZE Putative transposase protein (Fragment) O...    41   0.035
tr|Q7XWT6|Q7XWT6_ORYSJ OSJNBa0065B15.15 protein (OSJNBa0028M15.5...    41   0.035
tr|Q2QUK0|Q2QUK0_ORYSJ Transposon protein, putative, CACTA, En/S...    40   0.077
tr|Q0J397|Q0J397_ORYSJ Os09g0244100 protein OS=Oryza sativa subs...    40   0.077
tr|Q5WMQ7|Q5WMQ7_ORYSJ Putative polyprotein OS=Oryza sativa subs...    39   0.10 
tr|Q2R0R0|Q2R0R0_ORYSJ Transposon protein, putative, CACTA, En/S...    39   0.10 
tr|A5BU47|A5BU47_VITVI Putative uncharacterized protein OS=Vitis...    39   0.10 
tr|A2Y1T5|A2Y1T5_ORYSI Putative uncharacterized protein OS=Oryza...    39   0.10 
tr|Q9SK20|Q9SK20_ARATH Putative TNP2-like transposon protein OS=...    39   0.13 
tr|Q53L52|Q53L52_ORYSJ Transposon protein, putative, CACTA, En/S...    39   0.13 
tr|Q9LNY8|Q9LNY8_ARATH F9C16.30 OS=Arabidopsis thaliana PE=4 SV=1      38   0.22 
tr|Q9C6X8|Q9C6X8_ARATH En/Spm-like transposon protein, putative ...    38   0.22 
tr|A5CB63|A5CB63_VITVI Putative uncharacterized protein OS=Vitis...    38   0.22 
tr|A5B3H3|A5B3H3_VITVI Putative uncharacterized protein OS=Vitis...    38   0.22 
tr|A5ALA6|A5ALA6_VITVI Putative uncharacterized protein OS=Vitis...    38   0.22 
tr|A5AEV7|A5AEV7_VITVI Putative uncharacterized protein OS=Vitis...    38   0.22 
tr|Q9ZQB5|Q9ZQB5_ARATH Putative transposon protein OS=Arabidopsi...    38   0.29 
tr|Q9SKS3|Q9SKS3_ARATH Putative uncharacterized protein At2g1063...    38   0.29 
tr|Q8S6M8|Q8S6M8_ORYSJ Putative TNP2-like transposon protein OS=...    38   0.29 
tr|Q7G3C6|Q7G3C6_ORYSJ Transposon protein, putative, CACTA, En/S...    38   0.29 

>tr|Q7G4N7|Q7G4N7_ORYSJ Transposon protein, putative, CACTA, En/Spm
           sub-class OS=Oryza sativa subsp. japonica
           GN=LOC_Os10g11250 PE=4 SV=2
          Length = 1167

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 22/47 (46%), Positives = 31/47 (65%)
 Frame = +3

Query: 3   IDIYLEPLIEDLEDLWRSIPVVDVLLAKGGRVAQVTGIHMWTMHDYP 143
           ID++LEPLIE+L +LW+ +P VDVL  K      +    +W +HDYP
Sbjct: 451 IDVFLEPLIEELLELWKGVPTVDVLTKK---KFDLHAAVIWCIHDYP 494


>tr|Q53QR1|Q53QR1_ORYSJ Transposase family tnp2, putative OS=Oryza
           sativa subsp. japonica PE=4 SV=1
          Length = 1114

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 22/47 (46%), Positives = 31/47 (65%)
 Frame = +3

Query: 3   IDIYLEPLIEDLEDLWRSIPVVDVLLAKGGRVAQVTGIHMWTMHDYP 143
           ID++LEPLIE+L +LW+ +P VDVL  K      +    +W +HDYP
Sbjct: 398 IDVFLEPLIEELLELWKGVPTVDVLTKK---KFDLHAAVIWCIHDYP 441


>tr|Q2QQ61|Q2QQ61_ORYSJ Transposon protein, putative, CACTA, En/Spm
           sub-class OS=Oryza sativa subsp. japonica
           GN=LOC_Os12g32120 PE=4 SV=1
          Length = 1014

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 21/47 (44%), Positives = 30/47 (63%)
 Frame = +3

Query: 3   IDIYLEPLIEDLEDLWRSIPVVDVLLAKGGRVAQVTGIHMWTMHDYP 143
           ID++LEPLIE+L +LW+ +P VD L  K      +    +W +HDYP
Sbjct: 351 IDVFLEPLIEELLELWKGVPTVDALTKK---KFDLHAAVIWCIHDYP 394


>tr|Q0E2G9|Q0E2G9_ORYSJ Os02g0241500 protein OS=Oryza sativa subsp.
           japonica GN=Os02g0241500 PE=4 SV=1
          Length = 984

 Score = 43.9 bits (102), Expect = 0.004
 Identities = 18/47 (38%), Positives = 29/47 (61%)
 Frame = +3

Query: 3   IDIYLEPLIEDLEDLWRSIPVVDVLLAKGGRVAQVTGIHMWTMHDYP 143
           +D++L+PLI++L DLW+ +P  D L  K      +    +W +HDYP
Sbjct: 284 MDLFLQPLIDELLDLWKGVPTYDALTKKS---FDLHATVIWCIHDYP 327


>tr|Q0P1B0|Q0P1B0_ORYSI Transposase (Fragment) OS=Oryza sativa
           subsp. indica PE=4 SV=1
          Length = 649

 Score = 43.1 bits (100), Expect = 0.007
 Identities = 17/47 (36%), Positives = 30/47 (63%)
 Frame = +3

Query: 3   IDIYLEPLIEDLEDLWRSIPVVDVLLAKGGRVAQVTGIHMWTMHDYP 143
           +D++L+PL+E+L +LW  +P +D L    G+   +    +W +HDYP
Sbjct: 320 MDLFLQPLVEELLNLWSGVPTLDALT---GKEFDLHAAIIWCIHDYP 363


>tr|Q0J7A0|Q0J7A0_ORYSJ Os08g0208400 protein OS=Oryza sativa subsp.
           japonica GN=Os08g0208400 PE=2 SV=1
          Length = 828

 Score = 43.1 bits (100), Expect = 0.007
 Identities = 17/47 (36%), Positives = 30/47 (63%)
 Frame = +3

Query: 3   IDIYLEPLIEDLEDLWRSIPVVDVLLAKGGRVAQVTGIHMWTMHDYP 143
           +D++L+PL+E+L +LW  +P +D L    G+   +    +W +HDYP
Sbjct: 382 MDLFLQPLVEELLNLWSGVPTLDALT---GKEFDLHAAIIWCIHDYP 425


>tr|Q7XKK8|Q7XKK8_ORYSJ OSJNBb0061C13.11 protein OS=Oryza sativa
           subsp. japonica GN=OSJNBb0061C13.11 PE=4 SV=1
          Length = 972

 Score = 42.4 bits (98), Expect = 0.012
 Identities = 16/46 (34%), Positives = 27/46 (58%)
 Frame = +3

Query: 6   DIYLEPLIEDLEDLWRSIPVVDVLLAKGGRVAQVTGIHMWTMHDYP 143
           D++L+PL+EDL +LW  +   D +  K  ++       +W +HDYP
Sbjct: 305 DVFLQPLVEDLLELWAGVDTYDAITGKSFKLRAAV---LWCIHDYP 347


>tr|Q0E017|Q0E017_ORYSJ Os02g0583300 protein OS=Oryza sativa subsp.
           japonica GN=Os02g0583300 PE=4 SV=1
          Length = 1136

 Score = 42.4 bits (98), Expect = 0.012
 Identities = 16/46 (34%), Positives = 27/46 (58%)
 Frame = +3

Query: 6   DIYLEPLIEDLEDLWRSIPVVDVLLAKGGRVAQVTGIHMWTMHDYP 143
           D++L+PL+EDL +LW  +   D +  K  ++       +W +HDYP
Sbjct: 384 DVFLQPLVEDLLELWAGVDTYDAITGKSFKLRAAV---LWCIHDYP 426


>tr|Q0DD95|Q0DD95_ORYSJ Os06g0240700 protein OS=Oryza sativa subsp.
           japonica GN=Os06g0240700 PE=4 SV=1
          Length = 1114

 Score = 42.4 bits (98), Expect = 0.012
 Identities = 16/46 (34%), Positives = 27/46 (58%)
 Frame = +3

Query: 6   DIYLEPLIEDLEDLWRSIPVVDVLLAKGGRVAQVTGIHMWTMHDYP 143
           D++L+PL+EDL +LW  +   D +  K  ++       +W +HDYP
Sbjct: 362 DVFLQPLVEDLLELWAGVDTYDAITGKSFKLRAAV---LWCIHDYP 404


>tr|Q04219|Q04219_ANTMA TNP2 (Fragment) OS=Antirrhinum majus GN=TAM1
           PE=4 SV=1
          Length = 752

 Score = 41.2 bits (95), Expect = 0.027
 Identities = 18/47 (38%), Positives = 28/47 (59%)
 Frame = +3

Query: 3   IDIYLEPLIEDLEDLWRSIPVVDVLLAKGGRVAQVTGIHMWTMHDYP 143
           ID+Y++PLIE+L++LW  +   D   A       V    +WT++DYP
Sbjct: 386 IDVYMQPLIEELQELWGGVNTYD---ASAKENFNVRAALLWTINDYP 429