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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913188
Clone id YMU001_000027_E04
Library
Length 544
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000027_E04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ATCTCAGACGTTGGTACACCAAGAAAATGTCGACCCAGGGAAGTGCTAACGGCAGGTGTA
TGGCAGTATACAGGAAGGTGTCAGAGTGCTTGGCCATGTGCTAGATACAGATTGAAACAA
GCGCGACTATGATGTGCATGGCAAATGTGGCCCTTTGTAGGTAAGTCGTGGGTTTTGAGC
TATATGAGTTAGGAAGCTTAAAGGTGGTGCAGTAGTGGTATTTATGCTGGATGGGTGGTC
AAGATCAGTACTTCAAAGTTTTTCATGTGCTCGGGTGAAGGTGCTTTGCCATTCATCAGT
TGGATATCGCATCGAGTCTGAAGAAAGAAACAATCGTGATGGTCGTGTTGGGGAACCTCT
AATCGAAGTACGACAATTGAGGGGTTCTTTTTATGCTAGGTATTAAAGGCTTGGTGTTAG
TCAACAAGCAATGTGGTTGTTTCCATTTGGTATACTCTGGTATGTGCATCCATAGGCAGG
AAAAAGGTGTAGCAGAAGGTAGCTATGTATGGCGTGTGCAAGGGGGCCAAGCCAGAAGCT
TTTT
■■Homology search results ■■ -
sp_hit_id A1DAL6
Definition sp|A1DAL6|KATG_NEOFI Catalase-peroxidase OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181)
Align length 54
Score (bit) 32.0
E-value 2.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913188|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_E04.
         (544 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A1DAL6|KATG_NEOFI Catalase-peroxidase OS=Neosartorya fischeri...    32   2.0  
sp|Q7Z7W6|KATG_ASPFU Catalase-peroxidase OS=Aspergillus fumigatu...    32   2.0  
sp|B0YAK0|KATG_ASPFC Catalase-peroxidase OS=Aspergillus fumigatu...    32   2.0  
sp|A2RPW9|KATG_HERSE Catalase-peroxidase OS=Herbaspirillum serop...    31   3.4  
sp|Q0K815|KATG_RALEH Catalase-peroxidase OS=Ralstonia eutropha (...    30   5.8  
sp|Q11181|YPC4_CAEEL Uncharacterized protein C05D10.4 OS=Caenorh...    30   7.6  
sp|Q8Y1B4|KATG_RALSO Catalase-peroxidase OS=Ralstonia solanacear...    30   7.6  
sp|Q96VT4|KATG_EMENI Catalase-peroxidase OS=Emericella nidulans ...    30   7.6  
sp|B2T4H0|KATG_BURPP Catalase-peroxidase OS=Burkholderia phytofi...    30   7.6  
sp|Q4V8D6|BRF2_RAT Transcription factor IIIB 50 kDa subunit OS=R...    30   7.6  
sp|O60304|ZN500_HUMAN Zinc finger protein 500 OS=Homo sapiens GN...    30   9.9  
sp|A8GGQ0|KATG_SERP5 Catalase-peroxidase OS=Serratia proteamacul...    30   9.9  
sp|A1TRV8|KATG_ACIAC Catalase-peroxidase OS=Acidovorax avenae su...    30   9.9  

>sp|A1DAL6|KATG_NEOFI Catalase-peroxidase OS=Neosartorya fischeri
           (strain ATCC 1020 / DSM 3700 / NRRL 181) GN=katG PE=3
           SV=1
          Length = 759

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = -2

Query: 300 TDEWQSTFTRAHEKL*STDLDHPSSINTTTAPPLSFLTHIAQNPRLTYKGPHLP 139
           T +    F  A+EK+    L+HP       A     LTH    PR  Y GP +P
Sbjct: 391 TTDLSLRFDPAYEKIARRFLEHPDQFADAFARAWFKLTHRDMGPRARYLGPEVP 444


>sp|Q7Z7W6|KATG_ASPFU Catalase-peroxidase OS=Aspergillus fumigatus
           GN=katG PE=1 SV=1
          Length = 759

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = -2

Query: 300 TDEWQSTFTRAHEKL*STDLDHPSSINTTTAPPLSFLTHIAQNPRLTYKGPHLP 139
           T +    F  A+EK+    L+HP       A     LTH    PR  Y GP +P
Sbjct: 391 TTDLSLRFDPAYEKIARRFLEHPDQFADAFARAWFKLTHRDMGPRARYLGPEVP 444


>sp|B0YAK0|KATG_ASPFC Catalase-peroxidase OS=Aspergillus fumigatus
           (strain CEA10 / CBS 144.89 / FGSC A1163) GN=katG PE=3
           SV=1
          Length = 759

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = -2

Query: 300 TDEWQSTFTRAHEKL*STDLDHPSSINTTTAPPLSFLTHIAQNPRLTYKGPHLP 139
           T +    F  A+EK+    L+HP       A     LTH    PR  Y GP +P
Sbjct: 391 TTDLSLRFDPAYEKIARRFLEHPDQFADAFARAWFKLTHRDMGPRARYLGPEVP 444


>sp|A2RPW9|KATG_HERSE Catalase-peroxidase OS=Herbaspirillum
           seropedicae GN=katG PE=1 SV=1
          Length = 748

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 22/73 (30%), Positives = 29/73 (39%)
 Frame = -2

Query: 357 GSPTRPSRLFLSSDSMRYPTDEWQSTFTRAHEKL*STDLDHPSSINTTTAPPLSFLTHIA 178
           G+P  P+ L          T +    F  A+EK+    L+HP       A     LTH  
Sbjct: 381 GAPLLPTML----------TTDLSLRFDPAYEKISRRFLEHPEQFADAFARAWFKLTHRD 430

Query: 177 QNPRLTYKGPHLP 139
             PR  Y GP +P
Sbjct: 431 LGPRSRYLGPEVP 443


>sp|Q0K815|KATG_RALEH Catalase-peroxidase OS=Ralstonia eutropha
           (strain ATCC 17699 / H16 / DSM 428 / Stanier 337)
           GN=katG PE=3 SV=1
          Length = 751

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = -2

Query: 300 TDEWQSTFTRAHEKL*STDLDHPSSINTTTAPPLSFLTHIAQNPRLTYKGPHLP 139
           T +    F  A+EK+    L+HP  +    A     L H    PR  Y GP +P
Sbjct: 390 TTDLSLRFDPAYEKISRRFLEHPDQLADAFARAWFKLIHRDMGPRARYLGPEVP 443


>sp|Q11181|YPC4_CAEEL Uncharacterized protein C05D10.4
           OS=Caenorhabditis elegans GN=C05D10.4 PE=2 SV=2
          Length = 597

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
 Frame = -2

Query: 207 PPLSFLTHIAQNPRLTYKGPHLPCTS*SRLF-----QSVSSTWPSTLTPSCILPYTCR*H 43
           PP  F TH+ +N ++ +K P     S   LF       +   WP+T+  S I P+    H
Sbjct: 9   PPDYFCTHLLKNHQIEWKKPVKAKASPIHLFVFLREPMIEQRWPTTVRNSSIHPHVSSAH 68


>sp|Q8Y1B4|KATG_RALSO Catalase-peroxidase OS=Ralstonia solanacearum
           GN=katG PE=3 SV=2
          Length = 724

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 17/54 (31%), Positives = 22/54 (40%)
 Frame = -2

Query: 300 TDEWQSTFTRAHEKL*STDLDHPSSINTTTAPPLSFLTHIAQNPRLTYKGPHLP 139
           T +    F  A+EK+     +HP       A     LTH    PR  Y GP +P
Sbjct: 364 TTDLSLRFDPAYEKISRRFYEHPEQFADAFARAWFKLTHRDMGPRARYLGPEVP 417


>sp|Q96VT4|KATG_EMENI Catalase-peroxidase OS=Emericella nidulans
           GN=katG PE=1 SV=1
          Length = 739

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 19/68 (27%), Positives = 30/68 (44%)
 Frame = -2

Query: 342 PSRLFLSSDSMRYPTDEWQSTFTRAHEKL*STDLDHPSSINTTTAPPLSFLTHIAQNPRL 163
           P R+  +  S+RY  +         +EK+    L++P       A     LTH    PR+
Sbjct: 361 PPRMLTTDLSLRYDPE---------YEKISRRFLENPDQFADAFARAWFKLTHRDVGPRV 411

Query: 162 TYKGPHLP 139
            Y+GP +P
Sbjct: 412 LYQGPEVP 419


>sp|B2T4H0|KATG_BURPP Catalase-peroxidase OS=Burkholderia
           phytofirmans (strain DSM 17436 / PsJN) GN=katG PE=3 SV=1
          Length = 753

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = -2

Query: 300 TDEWQSTFTRAHEKL*STDLDHPSSINTTTAPPLSFLTHIAQNPRLTYKGPHLP 139
           T +    F  A+EK+    L++P  +    A     LTH    PR  Y GP +P
Sbjct: 392 TTDLSLRFDPAYEKISRRFLENPDQLADAFARAWFKLTHRDMGPRARYLGPEVP 445


>sp|Q4V8D6|BRF2_RAT Transcription factor IIIB 50 kDa subunit
           OS=Rattus norvegicus GN=Brf2 PE=2 SV=1
          Length = 416

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 21/71 (29%), Positives = 34/71 (47%)
 Frame = -1

Query: 214 YCTTFKLPNSYSSKPTTYLQRATFAMHIIVALVSICI*HMAKHSDTFLYTAIHLPLALPW 35
           YC++FKL  +  S P  Y++     +   + LV +        ++T+L T  H PL +  
Sbjct: 176 YCSSFKLFQASPSMPAKYVEDKDKMLSRTLLLVELA-------NETWLVTGRH-PLPIIT 227

Query: 34  VDIFLVYQRLR 2
              FL +Q LR
Sbjct: 228 AATFLAWQSLR 238
tr_hit_id B6N7L1
Definition tr|B6N7L1|B6N7L1_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae
Align length 122
Score (bit) 34.7
E-value 3.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913188|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_E04.
         (544 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6N7L1|B6N7L1_BRAFL Putative uncharacterized protein OS=Branc...    35   3.4  

>tr|B6N7L1|B6N7L1_BRAFL Putative uncharacterized protein
            OS=Branchiostoma floridae GN=BRAFLDRAFT_126376 PE=4 SV=1
          Length = 1777

 Score = 34.7 bits (78), Expect = 3.4
 Identities = 33/122 (27%), Positives = 49/122 (40%), Gaps = 6/122 (4%)
 Frame = -2

Query: 381  LNCRTSIRGSPTRPSRLFLSSDSMRYPTDEWQSTFTRAHEKL*STDLDHPSSINTTTAPP 202
            L+   S+ GSPTRP +   S    R P D   ST T + +    +     S  N+   P 
Sbjct: 1553 LSSNESLPGSPTRPQKSPRSPPHYRSPPDSAHSTTTNSSQSSSPSSSVPNSPANSAHFPR 1612

Query: 201  LSFLTHIAQNPRLTYKGP------HLPCTS*SRLFQSVSSTWPSTLTPSCILPYTCR*HF 40
             S L  ++     T++ P      H+P +  +R      S    T +PS   P T   + 
Sbjct: 1613 PSSLHGLSHKLARTFRSPRRKSVGHIPLSPLARTPSPSPSATSPTRSPS---PLTLVSNH 1669

Query: 39   PG 34
            PG
Sbjct: 1670 PG 1671