| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913189|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_E05.
(482 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Sa... 102 1e-26
sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Sa... 102 1e-26
sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from tra... 87 2e-25
sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from tra... 79 3e-25
sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from tra... 89 1e-24
sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from tra... 79 5e-23
sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa prot... 79 4e-19
sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa prot... 76 3e-18
sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa prot... 76 3e-18
sp|P19199|POL_COYMV Putative polyprotein OS=Commelina yellow mot... 87 3e-17
sp|P27502|POL_RTBVP Polyprotein P3 OS=Rice tungro bacilliform vi... 72 9e-16
sp|P31843|RRPO_OENBE RNA-directed DNA polymerase homolog OS=Oeno... 79 1e-14
sp|P03554|POL_CAMVS Enzymatic polyprotein OS=Cauliflower mosaic ... 79 1e-14
sp|Q02964|POL_CAMVE Enzymatic polyprotein OS=Cauliflower mosaic ... 79 1e-14
sp|P03556|POL_CAMVD Enzymatic polyprotein OS=Cauliflower mosaic ... 79 1e-14
sp|P03555|POL_CAMVC Enzymatic polyprotein OS=Cauliflower mosaic ... 79 1e-14
sp|Q00962|POL_CAMVN Enzymatic polyprotein OS=Cauliflower mosaic ... 77 3e-14
sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from tra... 59 3e-11
sp|Q6XKE6|POLG_PVCV2 Genome polyprotein OS=Petunia vein clearing... 67 6e-11
sp|Q91DM0|POLG_PVCV1 Genome polyprotein OS=Petunia vein clearing... 67 6e-11
sp|P09523|POL_FMVD Enzymatic polyprotein OS=Figwort mosaic virus... 64 4e-10
sp|Q09575|YRD6_CAEEL Uncharacterized protein K02A2.6 OS=Caenorha... 59 9e-09
sp|Q7TD08|POL_CYLCV Enzymatic polyprotein OS=Cestrum yellow leaf... 59 1e-08
sp|P05400|POL_CERV Enzymatic polyprotein OS=Carnation etched rin... 51 2e-06
sp|P15629|POL_SOCMV Enzymatic polyprotein OS=Soybean chlorotic m... 50 4e-06
sp|P92523|M860_ARATH Uncharacterized mitochondrial protein AtMg0... 49 9e-06
sp|O93209|POL_FFV Pro-Pol polyprotein OS=Feline foamy virus GN=p... 47 6e-05
sp|Q9TTC1|POL_KORV Pro-Pol polyprotein OS=Koala retrovirus GN=pr... 41 8e-05
sp|P11227|POL_MLVRD Pol polyprotein OS=Radiation murine leukemia... 42 0.002
sp|P03355|POL_MLVMO Pol polyprotein OS=Moloney murine leukemia v... 40 0.004
>sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY3B-G PE=1 SV=3
Length = 1547
Score = 102 bits (255), Expect(2) = 1e-26
Identities = 50/98 (51%), Positives = 65/98 (66%)
Frame = -2
Query: 460 QVSSRIDLKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPATFSRMMDRIFHS 281
Q+ + +DL SGYHQI + P+D +KT+F T G YE+ VMPFGL NAP+TF+R M F
Sbjct: 680 QIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRD 739
Query: 280 YRSFTGVFFDDVLIFSEMEDEHYKHLALAFEELRKHRL 167
R F V+ DD+LIFSE +EH+KHL E L+ L
Sbjct: 740 LR-FVNVYLDDILIFSESPEEHWKHLDTVLERLKNENL 776
Score = 37.0 bits (84), Expect(2) = 1e-26
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = -3
Query: 192 LKNYANTDYFVNAKKSEFFLKEIHYLSHIVSHNQVRMDPDKIQAVVEWPTPSTIHDVRSF 13
L+ N + V KK +F +E +L + + ++ K A+ ++PTP T+ + F
Sbjct: 768 LERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRF 827
Query: 12 LGL 4
LG+
Sbjct: 828 LGM 830
>sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY3B-I PE=3 SV=2
Length = 1498
Score = 102 bits (255), Expect(2) = 1e-26
Identities = 50/98 (51%), Positives = 65/98 (66%)
Frame = -2
Query: 460 QVSSRIDLKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPATFSRMMDRIFHS 281
Q+ + +DL SGYHQI + P+D +KT+F T G YE+ VMPFGL NAP+TF+R M F
Sbjct: 706 QIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRD 765
Query: 280 YRSFTGVFFDDVLIFSEMEDEHYKHLALAFEELRKHRL 167
R F V+ DD+LIFSE +EH+KHL E L+ L
Sbjct: 766 LR-FVNVYLDDILIFSESPEEHWKHLDTVLERLKNENL 802
Score = 37.0 bits (84), Expect(2) = 1e-26
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = -3
Query: 192 LKNYANTDYFVNAKKSEFFLKEIHYLSHIVSHNQVRMDPDKIQAVVEWPTPSTIHDVRSF 13
L+ N + V KK +F +E +L + + ++ K A+ ++PTP T+ + F
Sbjct: 794 LERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRF 853
Query: 12 LGL 4
LG+
Sbjct: 854 LGM 856
>sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from
transposon opus OS=Drosophila melanogaster GN=pol PE=4
SV=1
Length = 1003
Score = 86.7 bits (213), Expect(2) = 2e-25
Identities = 44/94 (46%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Frame = -2
Query: 445 IDLKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPATFSRMMDRIFHSY-RSF 269
+DL SG+HQI + D+ KT+F T G YEFL +PFGL NAPA F RM+D I +
Sbjct: 217 LDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKV 276
Query: 268 TGVFFDDVLIFSEMEDEHYKHLALAFEELRKHRL 167
V+ DD+++FSE D H+K+L L L K L
Sbjct: 277 CYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANL 310
Score = 48.9 bits (115), Expect(2) = 2e-25
Identities = 19/64 (29%), Positives = 42/64 (65%)
Frame = -3
Query: 192 LKNYANTDYFVNAKKSEFFLKEIHYLSHIVSHNQVRMDPDKIQAVVEWPTPSTIHDVRSF 13
L + + + VN +KS F ++ +L +IV+ + ++ DP K++A+ E P P+++ +++ F
Sbjct: 302 LASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRF 361
Query: 12 LGLS 1
LG++
Sbjct: 362 LGMT 365
>sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from
transposon gypsy OS=Drosophila melanogaster GN=pol PE=4
SV=1
Length = 1035
Score = 79.0 bits (193), Expect(2) = 3e-25
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Frame = -2
Query: 466 KEQVSSRIDLKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPATFSRMMDRIF 287
K + + +DLKSGYHQI +A D KTSF G YEF +PFGL NA + F R +D +
Sbjct: 269 KAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVL 328
Query: 286 -HSYRSFTGVFFDDVLIFSEMEDEHYKHL 203
V+ DDV+IFSE E +H +H+
Sbjct: 329 REQIGKICYVYVDDVIIFSENESDHVRHI 357
Score = 56.2 bits (134), Expect(2) = 3e-25
Identities = 25/64 (39%), Positives = 42/64 (65%)
Frame = -3
Query: 192 LKNYANTDYFVNAKKSEFFLKEIHYLSHIVSHNQVRMDPDKIQAVVEWPTPSTIHDVRSF 13
LK + + V+ +K+ FF + + YL IVS + + DP+K++A+ E+P P ++ VRSF
Sbjct: 361 LKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSF 420
Query: 12 LGLS 1
LGL+
Sbjct: 421 LGLA 424
>sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from
transposon 17.6 OS=Drosophila melanogaster GN=pol PE=4
SV=1
Length = 1058
Score = 89.0 bits (219), Expect(2) = 1e-24
Identities = 46/94 (48%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Frame = -2
Query: 445 IDLKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPATFSRMMDRIFHS-YRSF 269
IDL G+HQI + P+ V KT+F T G YE+L MPFGL NAPATF R M+ I
Sbjct: 301 IDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDILRPLLNKH 360
Query: 268 TGVFFDDVLIFSEMEDEHYKHLALAFEELRKHRL 167
V+ DD+++FS DEH + L L FE+L K L
Sbjct: 361 CLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANL 394
Score = 44.3 bits (103), Expect(2) = 1e-24
Identities = 16/50 (32%), Positives = 36/50 (72%)
Frame = -3
Query: 150 KSEFFLKEIHYLSHIVSHNQVRMDPDKIQAVVEWPTPSTIHDVRSFLGLS 1
K EF +E +L H+++ + ++ +P+KI+A+ ++P P+ ++++FLGL+
Sbjct: 400 KCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLT 449
>sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from
transposon 297 OS=Drosophila melanogaster GN=pol PE=4
SV=1
Length = 1059
Score = 78.6 bits (192), Expect(2) = 5e-23
Identities = 42/96 (43%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = -2
Query: 466 KEQVSSRIDLKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPATFSRMMDRIF 287
K Q + IDL G+HQI + + + KT+F T G YE+L MPFGL NAPATF R M+ I
Sbjct: 293 KCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNIL 352
Query: 286 HS-YRSFTGVFFDDVLIFSEMEDEHYKHLALAFEEL 182
V+ DD++IFS EH + L F +L
Sbjct: 353 RPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKL 388
Score = 49.3 bits (116), Expect(2) = 5e-23
Identities = 21/60 (35%), Positives = 40/60 (66%)
Frame = -3
Query: 180 ANTDYFVNAKKSEFFLKEIHYLSHIVSHNQVRMDPDKIQAVVEWPTPSTIHDVRSFLGLS 1
A+ + + K EF KE ++L HIV+ + ++ +P K++A+V +P P+ ++R+FLGL+
Sbjct: 389 ADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLT 448
>sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa protein
type 1 OS=Schizosaccharomyces pombe GN=Tf2-1 PE=2 SV=1
Length = 1333
Score = 79.0 bits (193), Expect(2) = 4e-19
Identities = 38/98 (38%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = -2
Query: 457 VSSRIDLKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPATFSRMMDRIF-HS 281
+ +++DLKS YH IR+ D HK +FR G++E+LVMP+G++ APA F ++ I +
Sbjct: 497 IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA 556
Query: 280 YRSFTGVFFDDVLIFSEMEDEHYKHLALAFEELRKHRL 167
S + DD+LI S+ E EH KH+ ++L+ L
Sbjct: 557 KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANL 594
Score = 35.8 bits (81), Expect(2) = 4e-19
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = -3
Query: 192 LKNYANTDYFVNAKKSEFFLKEIHYLSHIVSHNQVRMDPDKIQAVVEWPTPSTIHDVRSF 13
L+ N + +N K EF ++ ++ + +S + I V++W P ++R F
Sbjct: 586 LQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQF 645
Query: 12 LG 7
LG
Sbjct: 646 LG 647
>sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa protein
type 3 OS=Schizosaccharomyces pombe GN=Tf2-11 PE=4 SV=1
Length = 1333
Score = 75.9 bits (185), Expect(2) = 3e-18
Identities = 37/98 (37%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = -2
Query: 457 VSSRIDLKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPATFSRMMDRIFHSY 278
+ +++DLKS YH IR+ D HK +FR G++E+LVMP+G++ APA F ++ I
Sbjct: 497 IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINTILGEV 556
Query: 277 R-SFTGVFFDDVLIFSEMEDEHYKHLALAFEELRKHRL 167
+ S + D++LI S+ E EH KH+ ++L+ L
Sbjct: 557 KESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNANL 594
Score = 35.8 bits (81), Expect(2) = 3e-18
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = -3
Query: 192 LKNYANTDYFVNAKKSEFFLKEIHYLSHIVSHNQVRMDPDKIQAVVEWPTPSTIHDVRSF 13
L+ N + +N K EF ++ ++ + +S + I V++W P ++R F
Sbjct: 586 LQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQF 645
Query: 12 LG 7
LG
Sbjct: 646 LG 647
>sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa protein
type 2 OS=Schizosaccharomyces pombe GN=Tf2-7 PE=2 SV=1
Length = 1333
Score = 75.9 bits (185), Expect(2) = 3e-18
Identities = 37/98 (37%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = -2
Query: 457 VSSRIDLKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPATFSRMMDRIFHSY 278
+ +++DLKS YH IR+ D HK +FR G++E+LVMP+G++ APA F ++ I
Sbjct: 497 IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINTILGEV 556
Query: 277 R-SFTGVFFDDVLIFSEMEDEHYKHLALAFEELRKHRL 167
+ S + D++LI S+ E EH KH+ ++L+ L
Sbjct: 557 KESHVVCYMDNILIHSKSESEHVKHVKDVLQKLKNANL 594
Score = 35.8 bits (81), Expect(2) = 3e-18
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = -3
Query: 192 LKNYANTDYFVNAKKSEFFLKEIHYLSHIVSHNQVRMDPDKIQAVVEWPTPSTIHDVRSF 13
L+ N + +N K EF ++ ++ + +S + I V++W P ++R F
Sbjct: 586 LQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQF 645
Query: 12 LG 7
LG
Sbjct: 646 LG 647
>sp|P19199|POL_COYMV Putative polyprotein OS=Commelina yellow mottle
virus PE=4 SV=2
Length = 1886
Score = 87.4 bits (215), Expect = 3e-17
Identities = 40/88 (45%), Positives = 57/88 (64%)
Frame = -2
Query: 466 KEQVSSRIDLKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPATFSRMMDRIF 287
+ ++ S+ DLKSG+ Q+ + + V T+F LYE+LVMPFGL NAPA F R MD +F
Sbjct: 1495 RSKIYSKFDLKSGFWQVAMEEESVPWTAFLAGNKLYEWLVMPFGLKNAPAIFQRKMDNVF 1554
Query: 286 HSYRSFTGVFFDDVLIFSEMEDEHYKHL 203
F V+ DD+L+FSE ++H +HL
Sbjct: 1555 KGTEKFIAVYIDDILVFSETAEQHSQHL 1582
|
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913189|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_E05.
(482 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q0ZLH4|Q0ZLH4_9ORYZ Polyprotein OS=Oryza australiensis PE=4 SV=1 117 4e-37
tr|Q7G774|Q7G774_ORYSJ Putative polyprotein (Retrotransposon pro... 118 5e-37
tr|Q4QXS8|Q4QXS8_HORVD Polyprotein OS=Hordeum vulgare var. disti... 114 5e-37
tr|Q2R4W7|Q2R4W7_ORYSJ Retrotransposon protein, putative, Ty3-gy... 117 5e-37
tr|Q7XX43|Q7XX43_ORYSJ OSJNBa0059D20.6 protein OS=Oryza sativa s... 117 9e-37
tr|Q7XUA3|Q7XUA3_ORYSJ OSJNBa0019D11.8 protein OS=Oryza sativa s... 117 9e-37
tr|Q7XEF2|Q7XEF2_ORYSJ Retrotransposon protein, putative, Ty3-gy... 117 9e-37
tr|Q2QR60|Q2QR60_ORYSJ Retrotransposon protein, putative, Ty3-gy... 117 9e-37
tr|Q01I31|Q01I31_ORYSA OSIGBa0145G11.8 protein OS=Oryza sativa G... 117 9e-37
tr|Q2R193|Q2R193_ORYSJ Retrotransposon protein, putative, Ty3-gy... 117 1e-36
tr|Q0D6S9|Q0D6S9_ORYSJ Os07g0444200 protein OS=Oryza sativa subs... 116 1e-36
tr|Q8S6V9|Q8S6V9_ORYSA Putative retroelement OS=Oryza sativa GN=... 117 1e-36
tr|Q7G6H1|Q7G6H1_ORYSJ Putative retroelement (Retrotransposon pr... 117 1e-36
tr|Q01HB3|Q01HB3_ORYSA OSIGBa0139N19-OSIGBa0137L10.2 protein OS=... 118 1e-36
tr|Q7XX57|Q7XX57_ORYSJ OSJNBb0049I21.6 protein OS=Oryza sativa s... 116 1e-36
tr|Q2QQH0|Q2QQH0_ORYSJ Retrotransposon protein, putative, Ty3-gy... 117 2e-36
tr|Q5NRP7|Q5NRP7_SOLDE Putative gag-pol polyprotein, identical O... 123 2e-36
tr|Q5NRP4|Q5NRP4_SOLDE Putative gag-pol polyprotein, identical O... 123 2e-36
tr|Q75HH6|Q75HH6_ORYSJ Putative polyprotein (Retrotransposon pro... 115 2e-36
tr|Q7XXI2|Q7XXI2_ORYSJ OSJNBa0059H15.7 protein OS=Oryza sativa s... 116 2e-36
tr|Q7XZG5|Q7XZG5_ORYSJ Putative gag-pol polyprotein OS=Oryza sat... 115 2e-36
tr|Q7XPS2|Q7XPS2_ORYSJ OSJNBa0065O17.9 protein OS=Oryza sativa s... 117 2e-36
tr|Q2QTW2|Q2QTW2_ORYSJ Retrotransposon protein, putative, Ty3-gy... 117 2e-36
tr|Q01JF4|Q01JF4_ORYSA H0502G05.12 protein OS=Oryza sativa GN=H0... 117 3e-36
tr|Q7X726|Q7X726_ORYSA OSJNBa0089N06.1 protein (OSJNBb0060E08.22... 117 3e-36
tr|Q2QNF0|Q2QNF0_ORYSJ Retrotransposon protein, putative, Ty3-gy... 117 3e-36
tr|Q2QU46|Q2QU46_ORYSJ Retrotransposon protein, putative, Ty3-gy... 117 3e-36
tr|Q7XJX8|Q7XJX8_ORYSJ OSJNBa0063C18.15 protein (OSJNBa0033G05.1... 117 3e-36
tr|Q7XQR0|Q7XQR0_ORYSA OSJNBa0091D06.9 protein OS=Oryza sativa G... 117 3e-36
tr|Q7XNK8|Q7XNK8_ORYSJ OSJNBb0062B06.9 protein OS=Oryza sativa s... 117 3e-36
>tr|Q0ZLH4|Q0ZLH4_9ORYZ Polyprotein OS=Oryza australiensis PE=4 SV=1
Length = 1469
Score = 117 bits (292), Expect(2) = 4e-37
Identities = 55/100 (55%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
Frame = -2
Query: 460 QVSSRIDLKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPATFSRMMDRIFHS 281
QV S+IDL+SGYHQ++I D+ KT+F T +GLYEF VM FGLTNAPA F +M+++F
Sbjct: 625 QVFSKIDLRSGYHQLKIRAGDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFME 684
Query: 280 Y-RSFTGVFFDDVLIFSEMEDEHYKHLALAFEELRKHRLF 164
Y F VF DD+LI+S+ ++EH +HL L E+LR+HRL+
Sbjct: 685 YLDKFVVVFIDDILIYSKNDEEHAEHLRLVLEKLREHRLY 724
Score = 61.6 bits (148), Expect(2) = 4e-37
Identities = 26/55 (47%), Positives = 39/55 (70%)
Frame = -3
Query: 165 FVNAKKSEFFLKEIHYLSHIVSHNQVRMDPDKIQAVVEWPTPSTIHDVRSFLGLS 1
+ K EF+LKE+ +L H+VS V +DP K++AV+EW P ++ +VRSFLGL+
Sbjct: 724 YAKFSKCEFWLKEVAFLGHVVSAGGVAVDPAKVEAVMEWKAPKSVTEVRSFLGLA 778
>tr|Q7G774|Q7G774_ORYSJ Putative polyprotein (Retrotransposon protein,
putative, Ty3-gypsy subclass) OS=Oryza sativa subsp.
japonica GN=OSJNBa0034B05.13 PE=4 SV=1
Length = 1569
Score = 118 bits (295), Expect(2) = 5e-37
Identities = 56/100 (56%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
Frame = -2
Query: 460 QVSSRIDLKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPATFSRMMDRIFHS 281
+V S+IDL+SGYHQ++I D+ KT+F T +GLYEF VM FGLTNAPA F +M+++F
Sbjct: 725 KVFSKIDLRSGYHQLKIRTGDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMD 784
Query: 280 Y-RSFTGVFFDDVLIFSEMEDEHYKHLALAFEELRKHRLF 164
Y F VF DD+LI+S+ EDEH +HL L E+LRKH+L+
Sbjct: 785 YLDKFVVVFIDDILIYSKDEDEHAEHLRLVLEKLRKHKLY 824
Score = 60.1 bits (144), Expect(2) = 5e-37
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = -3
Query: 165 FVNAKKSEFFLKEIHYLSHIVSHNQVRMDPDKIQAVVEWPTPSTIHDVRSFLGLS 1
+ K EF+LKE+ +L H++S V MDP K++AV EW P + ++RSF+GL+
Sbjct: 824 YAKFSKCEFWLKEVAFLGHVISAGGVAMDPAKVEAVTEWKAPKFVTEIRSFIGLA 878
>tr|Q4QXS8|Q4QXS8_HORVD Polyprotein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 1486
Score = 114 bits (285), Expect(2) = 5e-37
Identities = 52/100 (52%), Positives = 77/100 (77%), Gaps = 1/100 (1%)
Frame = -2
Query: 460 QVSSRIDLKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPATFSRMMDRIFHS 281
+V S++DL+ GYHQIRI +D+ KT+FRT+FG YE+ VM FGL NAP TF R+M+ IF
Sbjct: 642 KVFSKLDLRMGYHQIRIREEDIPKTAFRTSFGSYEYTVMSFGLPNAPPTFCRLMNYIFSP 701
Query: 280 YRS-FTGVFFDDVLIFSEMEDEHYKHLALAFEELRKHRLF 164
+++ F ++ DD+L+FSE E+EH KHL L ++LR+++L+
Sbjct: 702 FKNEFVFLYLDDILVFSEDEEEHEKHLRLVLDKLREYKLY 741
Score = 63.9 bits (154), Expect(2) = 5e-37
Identities = 26/55 (47%), Positives = 38/55 (69%)
Frame = -3
Query: 165 FVNAKKSEFFLKEIHYLSHIVSHNQVRMDPDKIQAVVEWPTPSTIHDVRSFLGLS 1
+ K EF+LKE+ YL HI+S +++DP K+QA+VEW P + +RSFLGL+
Sbjct: 741 YAKFSKCEFWLKEVVYLGHIISAEGIKVDPSKVQAIVEWEPPQNVKQLRSFLGLA 795
>tr|Q2R4W7|Q2R4W7_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os11g27050 PE=4 SV=1
Length = 1469
Score = 117 bits (294), Expect(2) = 5e-37
Identities = 55/100 (55%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
Frame = -2
Query: 460 QVSSRIDLKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPATFSRMMDRIFHS 281
+V S+IDL+SGYHQ++I +D+ KT+F T +GLYEF VM FGLTNAPA F +M+++F
Sbjct: 626 KVFSKIDLRSGYHQLKIRTRDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMD 685
Query: 280 Y-RSFTGVFFDDVLIFSEMEDEHYKHLALAFEELRKHRLF 164
Y F VF DD+LI+S+ E+EH +HL L E+LRKH+L+
Sbjct: 686 YLDKFVVVFIDDILIYSKDEEEHAEHLQLVLEKLRKHKLY 725
Score = 60.5 bits (145), Expect(2) = 5e-37
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = -3
Query: 165 FVNAKKSEFFLKEIHYLSHIVSHNQVRMDPDKIQAVVEWPTPSTIHDVRSFLGLS 1
+ K EF+LKE+ +L H++S V +DP K++AV EW P ++ ++RSFLGL+
Sbjct: 725 YAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRSFLGLA 779
>tr|Q7XX43|Q7XX43_ORYSJ OSJNBa0059D20.6 protein OS=Oryza sativa
subsp. japonica GN=OSJNBa0059D20.6 PE=4 SV=2
Length = 1470
Score = 117 bits (292), Expect(2) = 9e-37
Identities = 54/100 (54%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
Frame = -2
Query: 460 QVSSRIDLKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPATFSRMMDRIFHS 281
+V S+IDL+SGYHQ++I +D+ KT+F T +GLYEF VM FGLTNAPA F +M+++F
Sbjct: 626 KVFSKIDLRSGYHQLKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFME 685
Query: 280 Y-RSFTGVFFDDVLIFSEMEDEHYKHLALAFEELRKHRLF 164
Y F VF DD+LI+S+ E+EH +HL L ++LRKH+L+
Sbjct: 686 YLDKFVVVFIDDILIYSKDEEEHAEHLRLVLQKLRKHKLY 725
Score = 60.5 bits (145), Expect(2) = 9e-37
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = -3
Query: 165 FVNAKKSEFFLKEIHYLSHIVSHNQVRMDPDKIQAVVEWPTPSTIHDVRSFLGLS 1
+ K EF+LKE+ +L H++S V +DP K++AV EW P ++ ++RSFLGL+
Sbjct: 725 YAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRSFLGLA 779
>tr|Q7XUA3|Q7XUA3_ORYSJ OSJNBa0019D11.8 protein OS=Oryza sativa
subsp. japonica GN=OSJNBa0019D11.8 PE=4 SV=1
Length = 1470
Score = 117 bits (292), Expect(2) = 9e-37
Identities = 54/100 (54%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
Frame = -2
Query: 460 QVSSRIDLKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPATFSRMMDRIFHS 281
+V S+IDL+SGYHQ++I +D+ KT+F T +GLYEF VM FGLTNAPA F +M+++F
Sbjct: 626 KVFSKIDLRSGYHQLKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMD 685
Query: 280 Y-RSFTGVFFDDVLIFSEMEDEHYKHLALAFEELRKHRLF 164
Y F VF DD+LI+S+ E+EH +HL L ++LRKH+L+
Sbjct: 686 YLDKFVVVFIDDILIYSKDEEEHAEHLRLVLQKLRKHKLY 725
Score = 60.5 bits (145), Expect(2) = 9e-37
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = -3
Query: 165 FVNAKKSEFFLKEIHYLSHIVSHNQVRMDPDKIQAVVEWPTPSTIHDVRSFLGLS 1
+ K EF+LKE+ +L H++S V +DP K++AV EW P ++ ++RSFLGL+
Sbjct: 725 YAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRSFLGLA 779
>tr|Q7XEF2|Q7XEF2_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os10g28930 PE=4 SV=1
Length = 1470
Score = 117 bits (292), Expect(2) = 9e-37
Identities = 54/100 (54%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
Frame = -2
Query: 460 QVSSRIDLKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPATFSRMMDRIFHS 281
+V S+IDL+SGYHQ++I +D+ KT+F T +GLYEF VM FGLTNAPA F +M+++F
Sbjct: 626 KVFSKIDLRSGYHQLKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMD 685
Query: 280 Y-RSFTGVFFDDVLIFSEMEDEHYKHLALAFEELRKHRLF 164
Y F VF DD+LI+S+ E+EH +HL L ++LRKH+L+
Sbjct: 686 YLDKFVVVFIDDILIYSKDEEEHAEHLRLVLQKLRKHKLY 725
Score = 60.5 bits (145), Expect(2) = 9e-37
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = -3
Query: 165 FVNAKKSEFFLKEIHYLSHIVSHNQVRMDPDKIQAVVEWPTPSTIHDVRSFLGLS 1
+ K EF+LKE+ +L H++S V +DP K++AV EW P ++ ++RSFLGL+
Sbjct: 725 YAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRSFLGLA 779
>tr|Q2QR60|Q2QR60_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os12g28690 PE=4 SV=1
Length = 1470
Score = 117 bits (292), Expect(2) = 9e-37
Identities = 54/100 (54%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
Frame = -2
Query: 460 QVSSRIDLKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPATFSRMMDRIFHS 281
+V S+IDL+SGYHQ++I +D+ KT+F T +GLYEF VM FGLTNAPA F +M+++F
Sbjct: 626 KVFSKIDLRSGYHQLKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMD 685
Query: 280 Y-RSFTGVFFDDVLIFSEMEDEHYKHLALAFEELRKHRLF 164
Y F VF DD+LI+S+ E+EH +HL L ++LRKH+L+
Sbjct: 686 YLDKFVVVFIDDILIYSKDEEEHAEHLRLVLQKLRKHKLY 725
Score = 60.5 bits (145), Expect(2) = 9e-37
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = -3
Query: 165 FVNAKKSEFFLKEIHYLSHIVSHNQVRMDPDKIQAVVEWPTPSTIHDVRSFLGLS 1
+ K EF+LKE+ +L H++S V +DP K++AV EW P ++ ++RSFLGL+
Sbjct: 725 YAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRSFLGLA 779
>tr|Q01I31|Q01I31_ORYSA OSIGBa0145G11.8 protein OS=Oryza sativa
GN=OSIGBa0145G11.8 PE=4 SV=1
Length = 1470
Score = 117 bits (292), Expect(2) = 9e-37
Identities = 54/100 (54%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
Frame = -2
Query: 460 QVSSRIDLKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPATFSRMMDRIFHS 281
+V S+IDL+SGYHQ++I +D+ KT+F T +GLYEF VM FGLTNAPA F +M+++F
Sbjct: 626 KVFSKIDLRSGYHQLKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMD 685
Query: 280 Y-RSFTGVFFDDVLIFSEMEDEHYKHLALAFEELRKHRLF 164
Y F VF DD+LI+S+ E+EH +HL L ++LRKH+L+
Sbjct: 686 YLDKFVVVFIDDILIYSKDEEEHAEHLRLVLQKLRKHKLY 725
Score = 60.5 bits (145), Expect(2) = 9e-37
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = -3
Query: 165 FVNAKKSEFFLKEIHYLSHIVSHNQVRMDPDKIQAVVEWPTPSTIHDVRSFLGLS 1
+ K EF+LKE+ +L H++S V +DP K++AV EW P ++ ++RSFLGL+
Sbjct: 725 YAKFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRSFLGLA 779
>tr|Q2R193|Q2R193_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os11g39950 PE=4 SV=1
Length = 1712
Score = 117 bits (292), Expect(2) = 1e-36
Identities = 54/102 (52%), Positives = 77/102 (75%), Gaps = 1/102 (0%)
Frame = -2
Query: 460 QVSSRIDLKSGYHQIRIAPQDVHKTSFRTTFGLYEFLVMPFGLTNAPATFSRMMDRIFHS 281
+V S IDL+SGYHQ++I +D+ KT+F T +GLYEF VM FGLTNAPA F +M+++F
Sbjct: 967 KVFSTIDLRSGYHQLKIRTEDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMD 1026
Query: 280 Y-RSFTGVFFDDVLIFSEMEDEHYKHLALAFEELRKHRLFRE 158
Y F VF DD+LI+S+ E+EH +HL L ++LRKH+L+++
Sbjct: 1027 YLDKFVVVFIDDILIYSKDEEEHAEHLRLVLQKLRKHKLYKK 1068
Score = 60.1 bits (144), Expect(2) = 1e-36
Identities = 24/50 (48%), Positives = 37/50 (74%)
Frame = -3
Query: 150 KSEFFLKEIHYLSHIVSHNQVRMDPDKIQAVVEWPTPSTIHDVRSFLGLS 1
K EF+LKE+ +L H++S V +DP K++AV EW P ++ ++RSFLGL+
Sbjct: 1071 KCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRSFLGLA 1120
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