BP913204
Clone id YMU001_000027_F08
Library
Length 584
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000027_F08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TAAAGGCAAGTAGGTAGGGAAATAAAAAATTGATAAGAAGGAGGATTCCAATGCAACATG
TAAAAATATATCTTTCCACAGCCCCTGTTGTAGCTACGATATGGTTTGGCTTACTGGCTG
GTTTATTAATAGAAATAAATCGATTCTTTCCGGATGCTTTATTATTTCCATTTCCCTAAC
TTATTGTTATTAACTAAACCAAAGGAGCCGTGTAGGAACCATACGAAGTGAGAACTCTAT
GGTTCGTCATACACGTAATAATGACTCAATTTAGTGATGGGAGTGTTTAATCTATTTACT
TCATAGGTCGAAACTTCGTAAGTAGTTCGTTTCTATTGCTATGGATCTACATGCGACCCT
CACCCCCTCTTTTTGGGGAAACTAATTAAATTAGAGTACATCTGATTCCATGGCCAATAC
TAAAGATGCAAGGGTAACTATTGCTTTGGAATGTACAAGTTGTATTCAGAGAAAAACCAG
TGGAAAATCCGCGGGTCTTTGCCGATACACTACACGTAAAAATCGTCGTAACACACCCGC
TCGGCTGGAGTTAAGAAGAAGTATTGCTTCCATTGTCACAAGCA
■■Homology search results ■■ -
sp_hit_id Q85FK1
Definition sp|Q85FK1|RK33_ADICA 50S ribosomal protein L33, chloroplastic OS=Adiantum capillus-veneris
Align length 50
Score (bit) 100.0
E-value 8.0e-23
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913204|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_F08.
(584 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q85FK1|RK33_ADICA 50S ribosomal protein L33, chloroplastic OS... 100 8e-23
sp|B2XWM6|RK33_FAGEA 50S ribosomal protein L33, chloroplastic OS... 69 1e-11
sp|Q09WZ6|RK33_MORIN 50S ribosomal protein L33, chloroplastic OS... 69 2e-11
sp|A4QLC7|RK33_LEPVR 50S ribosomal protein L33, chloroplastic OS... 68 3e-11
sp|B1A956|RK33_CARPA 50S ribosomal protein L33, chloroplastic OS... 68 3e-11
sp|A4QL40|RK33_DRANE 50S ribosomal protein L33, chloroplastic OS... 68 4e-11
sp|A4QKV2|RK33_CRUWA 50S ribosomal protein L33, chloroplastic OS... 68 4e-11
sp|A4QKL3|RK33_CAPBU 50S ribosomal protein L33, chloroplastic OS... 68 4e-11
sp|A4QKC6|RK33_BARVE 50S ribosomal protein L33, chloroplastic OS... 68 4e-11
sp|A4QK39|RK33_ARAHI 50S ribosomal protein L33, chloroplastic OS... 68 4e-11
sp|B1VKE2|RK33_CRYJA 50S ribosomal protein L33, chloroplastic OS... 67 5e-11
sp|A4QJV2|RK33_OLIPU 50S ribosomal protein L33, chloroplastic OS... 67 8e-11
sp|A4QLV4|RK33_NASOF 50S ribosomal protein L33, chloroplastic OS... 67 8e-11
sp|Q2L929|RK33_GOSHI 50S ribosomal protein L33, chloroplastic OS... 67 8e-11
sp|A0ZZ56|RK33_GOSBA 50S ribosomal protein L33, chloroplastic OS... 67 8e-11
sp|P56796|RK33_ARATH 50S ribosomal protein L33, chloroplastic OS... 67 8e-11
sp|A4GYT2|RK33_POPTR 50S ribosomal protein L33, chloroplastic OS... 66 1e-10
sp|Q14FD6|RK33_POPAL 50S ribosomal protein L33, chloroplastic OS... 66 1e-10
sp|A4QLL5|RK33_LOBMA 50S ribosomal protein L33, chloroplastic OS... 66 1e-10
sp|P30068|RK33_EPIVI 50S ribosomal protein L33, plastid OS=Epifa... 65 2e-10
sp|Q2QD68|RK33_CUCSA 50S ribosomal protein L33, chloroplastic OS... 65 2e-10
sp|A4QJD6|RK33_AETCO 50S ribosomal protein L33, chloroplastic OS... 65 2e-10
sp|A4QJM0|RK33_AETGR 50S ribosomal protein L33, chloroplastic OS... 65 3e-10
sp|Q85FK2|PSAJ_ADICA Photosystem I reaction center subunit IX OS... 65 3e-10
sp|B5LMP5|RK33_CICAR 50S ribosomal protein L33, chloroplastic OS... 64 4e-10
sp|A2T354|RK33_ANGEV 50S ribosomal protein L33, chloroplastic OS... 64 4e-10
sp|Q68RY5|RK33_PANGI 50S ribosomal protein L33, chloroplastic OS... 64 7e-10
sp|Q49KX8|RK33_EUCGG 50S ribosomal protein L33, chloroplastic OS... 64 7e-10
sp|A6MM57|RK33_BUXMI 50S ribosomal protein L33, chloroplastic OS... 64 7e-10
sp|Q0ZIZ9|RK33_VITVI 50S ribosomal protein L33, chloroplastic OS... 63 9e-10

>sp|Q85FK1|RK33_ADICA 50S ribosomal protein L33, chloroplastic
OS=Adiantum capillus-veneris GN=rpl33 PE=2 SV=2
Length = 66

Score = 100 bits (249), Expect(2) = 8e-23
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +2

Query: 410 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELRR 559
MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLEL +
Sbjct: 1 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELEK 50



Score = 26.9 bits (58), Expect(2) = 8e-23
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1

Query: 556 KKYCFHCHK 582
+KYCFHCHK
Sbjct: 49 EKYCFHCHK 57


>sp|B2XWM6|RK33_FAGEA 50S ribosomal protein L33, chloroplastic
OS=Fagopyrum esculentum subsp. ancestrale GN=rpl33 PE=3
SV=1
Length = 66

Score = 69.3 bits (168), Expect = 1e-11
Identities = 30/50 (60%), Positives = 41/50 (82%)
Frame = +2

Query: 410 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELRR 559
MA KDARV++ LECTSC+++ + +S G+ RY T+KNRRNTP+RLELR+
Sbjct: 1 MAKGKDARVSVILECTSCVRKNVNKESRGISRYITQKNRRNTPSRLELRK 50


>sp|Q09WZ6|RK33_MORIN 50S ribosomal protein L33, chloroplastic
OS=Morus indica GN=rpl33 PE=3 SV=1
Length = 66

Score = 68.9 bits (167), Expect = 2e-11
Identities = 31/50 (62%), Positives = 40/50 (80%)
Frame = +2

Query: 410 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELRR 559
MA KDARVTI LECTSC++ + + +S G+ RY T+KNR NTP+RLELR+
Sbjct: 1 MAKGKDARVTIILECTSCLRNRVNKESRGISRYITQKNRHNTPSRLELRK 50


>sp|A4QLC7|RK33_LEPVR 50S ribosomal protein L33, chloroplastic
OS=Lepidium virginicum GN=rpl33 PE=3 SV=1
Length = 66

Score = 68.2 bits (165), Expect = 3e-11
Identities = 32/53 (60%), Positives = 39/53 (73%)
Frame = +2

Query: 410 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELRRSIA 568
MA KD RVTI LECTSC++ +SAG+ RY T+KNR NTP+RLELR+ A
Sbjct: 1 MAKGKDVRVTIILECTSCVRNDIKKESAGISRYITQKNRHNTPSRLELRKFCA 53


>sp|B1A956|RK33_CARPA 50S ribosomal protein L33, chloroplastic
OS=Carica papaya GN=rpl33 PE=3 SV=1
Length = 66

Score = 68.2 bits (165), Expect = 3e-11
Identities = 31/50 (62%), Positives = 39/50 (78%)
Frame = +2

Query: 410 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELRR 559
MA KDARVTI LECTSC++ + +S G+ RY T+KNR NTP+RLELR+
Sbjct: 1 MAKGKDARVTIILECTSCVRNGVNKESTGISRYITQKNRHNTPSRLELRK 50


>sp|A4QL40|RK33_DRANE 50S ribosomal protein L33, chloroplastic
OS=Draba nemorosa GN=rpl33 PE=3 SV=1
Length = 66

Score = 67.8 bits (164), Expect = 4e-11
Identities = 31/50 (62%), Positives = 38/50 (76%)
Frame = +2

Query: 410 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELRR 559
MA KD RVTI LECTSC++ +SAG+ RY T+KNR NTP+RLELR+
Sbjct: 1 MAKGKDVRVTIILECTSCVRNDIKKESAGISRYITQKNRHNTPSRLELRK 50


>sp|A4QKV2|RK33_CRUWA 50S ribosomal protein L33, chloroplastic
OS=Crucihimalaya wallichii GN=rpl33 PE=3 SV=1
Length = 66

Score = 67.8 bits (164), Expect = 4e-11
Identities = 31/50 (62%), Positives = 38/50 (76%)
Frame = +2

Query: 410 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELRR 559
MA KD RVTI LECTSC++ +SAG+ RY T+KNR NTP+RLELR+
Sbjct: 1 MAKGKDVRVTIILECTSCVRNDIKKESAGISRYITQKNRHNTPSRLELRK 50


>sp|A4QKL3|RK33_CAPBU 50S ribosomal protein L33, chloroplastic
OS=Capsella bursa-pastoris GN=rpl33 PE=3 SV=1
Length = 66

Score = 67.8 bits (164), Expect = 4e-11
Identities = 31/50 (62%), Positives = 38/50 (76%)
Frame = +2

Query: 410 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELRR 559
MA KD RVTI LECTSC++ +SAG+ RY T+KNR NTP+RLELR+
Sbjct: 1 MAKGKDVRVTIILECTSCVRNDIKKESAGISRYITQKNRHNTPSRLELRK 50


>sp|A4QKC6|RK33_BARVE 50S ribosomal protein L33, chloroplastic
OS=Barbarea verna GN=rpl33 PE=3 SV=1
Length = 66

Score = 67.8 bits (164), Expect = 4e-11
Identities = 31/50 (62%), Positives = 38/50 (76%)
Frame = +2

Query: 410 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELRR 559
MA KD RVTI LECTSC++ +SAG+ RY T+KNR NTP+RLELR+
Sbjct: 1 MAKGKDVRVTIILECTSCVRNDIKKESAGISRYITQKNRHNTPSRLELRK 50


>sp|A4QK39|RK33_ARAHI 50S ribosomal protein L33, chloroplastic
OS=Arabis hirsuta GN=rpl33 PE=3 SV=1
Length = 66

Score = 67.8 bits (164), Expect = 4e-11
Identities = 31/50 (62%), Positives = 38/50 (76%)
Frame = +2

Query: 410 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELRR 559
MA KD RVTI LECTSC++ +SAG+ RY T+KNR NTP+RLELR+
Sbjct: 1 MAKGKDVRVTIILECTSCVRNDIKKESAGISRYITQKNRHNTPSRLELRK 50


tr_hit_id B7ZIQ6
Definition tr|B7ZIQ6|B7ZIQ6_KETDA Ribosomal protein L33 OS=Keteleeria davidiana
Align length 50
Score (bit) 67.0
E-value 7.0e-10
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913204|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_F08.
(584 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7ZIQ6|B7ZIQ6_KETDA Ribosomal protein L33 OS=Keteleeria david... 67 7e-10
tr|B5AH23|B5AH23_9ROSI Ribosomal protein L33 OS=Gonystylus banca... 65 3e-09
tr|Q06R44|Q06R44_9LAMI 50S ribosomal protein L33 OS=Forsythia eu... 65 4e-09
tr|Q06QZ1|Q06QZ1_9LAMI 50S ribosomal protein L33 OS=Jasminum aby... 65 4e-09
tr|B8R469|B8R469_TRISU Ribosomal protein L33 OS=Trifolium subter... 65 4e-09
tr|B2D074|B2D074_OLEEU Ribosomal protein L33 OS=Olea europaea GN... 65 4e-09
tr|Q4FG87|Q4FG87_9ASPA 50S ribosomal protein L33 (Fragment) OS=Y... 64 5e-09
tr|Q4FG88|Q4FG88_TYPLA 50S ribosomal protein L33 (Fragment) OS=T... 64 8e-09
tr|B7UCF6|B7UCF6_9POAL Rpl33 OS=Typha domingensis PE=4 SV=1 64 8e-09
tr|A9QC76|A9QC76_TRACE 50S ribosomal protein L33 (Fragment) OS=T... 64 8e-09
tr|Q4FG92|Q4FG92_ACOAM 50S ribosomal protein L33 (Fragment) OS=A... 63 1e-08
tr|A7QCX0|A7QCX0_VITVI 50S ribosomal protein L33 OS=Vitis vinife... 63 1e-08
tr|B3IWG9|B3IWG9_TAKLE Ribosomal protein L33 OS=Takakia lepidozi... 63 1e-08
tr|B0LP34|B0LP34_9CARY 50S ribosomal protein L33 OS=Silene aegyp... 62 2e-08
tr|A9QC02|A9QC02_9ASTR 50S ribosomal protein L33 (Fragment) OS=S... 62 2e-08
tr|A9QBK7|A9QBK7_MUSAC 50S ribosomal protein L33 (Fragment) OS=M... 62 2e-08
tr|A9QAW1|A9QAW1_9APIA 50S ribosomal protein L33 (Fragment) OS=A... 62 2e-08
tr|Q4FG89|Q4FG89_RANMC 50S ribosomal protein L33 (Fragment) OS=R... 62 3e-08
tr|B4Y1V2|B4Y1V2_VISVU Ribosomal protein L33 (Fragment) OS=Visca... 62 3e-08
tr|Q4FG91|Q4FG91_GINBI 50S ribosomal protein L33 (Fragment) OS=G... 61 5e-08
tr|B4Y1W1|B4Y1W1_AGRGI Ribosomal protein L33 OS=Agrostemma githa... 61 5e-08
tr|B6RRU3|B6RRU3_9CARY Ribosomal protein L33 OS=Eudianthe laeta ... 60 7e-08
tr|B0LNQ8|B0LNQ8_SILLA 50S ribosomal protein L33 OS=Silene latif... 60 7e-08
tr|B0LN85|B0LN85_LYCCH 50S ribosomal protein L33 OS=Lychnis chal... 60 7e-08
tr|B4Y1V9|B4Y1V9_9CARY Ribosomal protein L33 OS=Atocion rupestre... 60 9e-08
tr|B4Y1V7|B4Y1V7_9CARY Ribosomal protein L33 OS=Lychnis flos-cuc... 60 9e-08
tr|B4Y1V5|B4Y1V5_9CARY Ribosomal protein L33 OS=Lychnis flos-jov... 60 9e-08
tr|B4Y1V3|B4Y1V3_9CARY Ribosomal protein L33 OS=Petrocoptis pyre... 60 9e-08
tr|B0LP55|B0LP55_9CARY 50S ribosomal protein L33 OS=Silene atoci... 60 9e-08
tr|B0LP13|B0LP13_9CARY 50S ribosomal protein L33 OS=Silene schaf... 60 9e-08

>tr|B7ZIQ6|B7ZIQ6_KETDA Ribosomal protein L33 OS=Keteleeria
davidiana GN=rpl33 PE=4 SV=1
Length = 68

Score = 67.0 bits (162), Expect = 7e-10
Identities = 32/50 (64%), Positives = 36/50 (72%)
Frame = +2

Query: 410 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELRR 559
MA + D RVTI LECTSC Q K G+ RYTTRKNRRNTP RLEL++
Sbjct: 1 MAKSGDVRVTITLECTSCTQDSVYKKFPGISRYTTRKNRRNTPIRLELKK 50


>tr|B5AH23|B5AH23_9ROSI Ribosomal protein L33 OS=Gonystylus bancanus
GN=rpl33 PE=4 SV=1
Length = 66

Score = 65.1 bits (157), Expect = 3e-09
Identities = 29/50 (58%), Positives = 38/50 (76%)
Frame = +2

Query: 410 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELRR 559
MA +KD RV I LECTSC++ + +S G+ RY T+KNR NTP+RLELR+
Sbjct: 1 MAKSKDVRVMIILECTSCVRNGINKESTGISRYITQKNRHNTPSRLELRK 50


>tr|Q06R44|Q06R44_9LAMI 50S ribosomal protein L33 OS=Forsythia
europaea GN=rpl33 PE=3 SV=1
Length = 66

Score = 64.7 bits (156), Expect = 4e-09
Identities = 30/50 (60%), Positives = 36/50 (72%)
Frame = +2

Query: 410 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELRR 559
MA KDARVT+ LECTSC++ S G+ RY T+KNR NTP RLELR+
Sbjct: 1 MAKGKDARVTVILECTSCVRNGVKKVSRGISRYITQKNRHNTPNRLELRK 50


>tr|Q06QZ1|Q06QZ1_9LAMI 50S ribosomal protein L33 OS=Jasminum
abyssinicum GN=rpl33 PE=3 SV=1
Length = 66

Score = 64.7 bits (156), Expect = 4e-09
Identities = 30/50 (60%), Positives = 36/50 (72%)
Frame = +2

Query: 410 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELRR 559
MA KDARVT+ LECTSC++ S G+ RY T+KNR NTP RLELR+
Sbjct: 1 MAKGKDARVTVILECTSCVRNGVKKVSRGISRYITQKNRHNTPNRLELRK 50


>tr|B8R469|B8R469_TRISU Ribosomal protein L33 OS=Trifolium
subterraneum GN=rpl33 PE=4 SV=1
Length = 66

Score = 64.7 bits (156), Expect = 4e-09
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +2

Query: 410 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELRR 559
MA KD R+T+ LECTSC ++ + KS G+ RY T+KNR NTP+RLEL++
Sbjct: 1 MAKGKDIRITVILECTSCDKKSVNKKSRGISRYITQKNRHNTPSRLELKK 50


>tr|B2D074|B2D074_OLEEU Ribosomal protein L33 OS=Olea europaea
GN=rpl33 PE=4 SV=1
Length = 66

Score = 64.7 bits (156), Expect = 4e-09
Identities = 30/50 (60%), Positives = 36/50 (72%)
Frame = +2

Query: 410 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELRR 559
MA KDARVT+ LECTSC++ S G+ RY T+KNR NTP RLELR+
Sbjct: 1 MAKGKDARVTVILECTSCVRNGVKKVSRGISRYITQKNRHNTPNRLELRK 50


>tr|Q4FG87|Q4FG87_9ASPA 50S ribosomal protein L33 (Fragment)
OS=Yucca schidigera GN=rpl33 PE=3 SV=1
Length = 66

Score = 64.3 bits (155), Expect = 5e-09
Identities = 29/50 (58%), Positives = 37/50 (74%)
Frame = +2

Query: 410 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELRR 559
MA KD RV + LECTSCIQ + +S G+ RY T+KNR NTP+RL+LR+
Sbjct: 1 MAKGKDVRVRVILECTSCIQNGVNKESPGISRYITQKNRHNTPSRLDLRK 50


>tr|Q4FG88|Q4FG88_TYPLA 50S ribosomal protein L33 (Fragment)
OS=Typha latifolia GN=rpl33 PE=3 SV=1
Length = 66

Score = 63.5 bits (153), Expect = 8e-09
Identities = 28/50 (56%), Positives = 37/50 (74%)
Frame = +2

Query: 410 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELRR 559
MA KD RV + LECTSC++ + +S G+ RY T+KNR NTP+RLELR+
Sbjct: 1 MAKGKDVRVRVILECTSCVRNGVNKESPGISRYITQKNRHNTPSRLELRK 50


>tr|B7UCF6|B7UCF6_9POAL Rpl33 OS=Typha domingensis PE=4 SV=1
Length = 66

Score = 63.5 bits (153), Expect = 8e-09
Identities = 28/50 (56%), Positives = 37/50 (74%)
Frame = +2

Query: 410 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELRR 559
MA KD RV + LECTSC++ + +S G+ RY T+KNR NTP+RLELR+
Sbjct: 1 MAKGKDVRVRVILECTSCVRNGVNKESPGISRYITQKNRHNTPSRLELRK 50


>tr|A9QC76|A9QC76_TRACE 50S ribosomal protein L33 (Fragment)
OS=Trachelium caeruleum GN=rpl33 PE=3 SV=1
Length = 64

Score = 63.5 bits (153), Expect = 8e-09
Identities = 27/50 (54%), Positives = 37/50 (74%)
Frame = +2

Query: 410 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELRR 559
MA KD R+T+ LECT+C+++ + S G+ RY T+KNR NTP RLELR+
Sbjct: 1 MAKGKDIRITVILECTTCVRKGANKTSTGISRYITKKNRHNTPNRLELRK 50