BP913207 [AcEST]

BP913207
Clone id	YMU001_000027_F11
Library	YMU01
Length	564
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000027_F11.
Accession	BP913207
Tissue type	prothallium
Developmental stage	-
Contig ID	CL2518Contig1
Sequence	GGTAGGTGGTTGTATTGGATTGGGTTATGATTCGTGTGGTTACAAGGTCGTTGTGTAAGT TGAGAATGGTCTGATGGGAACAGGCGTGATGCCTCTTGGTGTCTCGAGACGTGAGGGTGG ATGAATTTATTTGATTTTATTCCAACATCCCCCTTCAGCTGGAATGCGGAGACGGAGTGA TGATTACGTGGGGGAAAGATCCCGAGACAAGTGCAATGTGCCGATGTAAAATGGGTTAAG TGCGCTCTTTTTTTGGTGATTGCAAGAGCAATCAGTGCGTACAAGAAAGAAATGGTTTAG GTTTGAATCTAGGATTCAGGAACGGTTGTCTTGAATTTTCAAGATGTGAAGCCTTCATCT TCCATTGTGGCTTCAAATACATCAAGCACTTGTGAGAAAGCTCTGAGTGTCATGGATGAA GAACTACAGATATTCCCGCCTTTCGTACATGACACGAGCCAACAAAAAATGATCAGTTGT GCTAGCCGTGTACATTCAGCAGCAGCAAGGAGGCACGTCAGTGAGACCAAGGAAGCACCT TTCATCACATATGCCACAAATTCA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	P10180
Definition	sp\|P10180\|CUT_DROME Homeobox protein cut OS=Drosophila melanogaster
Align length	38
Score (bit)	30.8
E-value	4.8
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP913207\|Adiantum capillus-veneris mRNA, clone: YMU001_000027_F11. (564 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|P10180\|CUT_DROME Homeobox protein cut OS=Drosophila melanogas... 31 4.8 >sp\|P10180\|CUT_DROME Homeobox protein cut OS=Drosophila melanogaster GN=ct PE=1 SV=1 Length = 2175 Score = 30.8 bits (68), Expect = 4.8 Identities = 12/38 (31%), Positives = 18/38 (47%) Frame = -2 Query: 119 HPHVSRHQEASRLFPSDHSQLTQRPCNHTNHNPIQYNH 6 H H +H + L H L Q+P + +N NP +H Sbjct: 676 HQHQQQHHQQQHLHQQHHHHLQQQPNSGSNSNPASNDH 713
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B6PAS9
Definition	tr\|B6PAS9\|B6PAS9_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae
Align length	77
Score (bit)	33.5
E-value	8.2
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP913207\|Adiantum capillus-veneris mRNA, clone: YMU001_000027_F11. (564 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B6PAS9\|B6PAS9_BRAFL Putative uncharacterized protein (Fragmen... 33 8.2 >tr\|B6PAS9\|B6PAS9_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae GN=BRAFLDRAFT_246536 PE=4 SV=1 Length = 815 Score = 33.5 bits (75), Expect = 8.2 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 6/77 (7%) Frame = -2 Query: 524 SLTCLLAAAECTRLAQLIIFCWLVSCTKGGNICSSSSMTLRAFSQ------VLDVFEATM 363 S+ CLL + L L + W+ C++ G + S M A + VL V + Sbjct: 349 SIKCLLVLSVAAFLPFLAVAYWIAPCSRAGRVLRSPFMKFLAHASSFAIFLVLLVLNSAE 408 Query: 362 EDEGFTS*KFKTTVPES 312 EGF++ TT P S Sbjct: 409 RFEGFSTGNVNTTHPPS 425