BP913208 |
Clone id |
YMU001_000027_F12 |
Library |
YMU01 |
Length |
519 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000027_F12. |
Accession |
BP913208 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1055Contig1 |
Sequence |
AGTTGATGTAGTTGCAATTGATTCGAGTGCTACTGTGATGGATTTTCGGAATTTATGGGT GACACATCAATATTCCAGTGTGCCGGTGTTTGAGCGACGTGTTGACAACATTGTTGGAAT AGCATATGCCATGGATATGCTTGACTATGTTGAGCAGGTTGAAGTGTTGCAGAAACTGAC CGTTGGTCGAATAGCTCACAAGCCTGCATATTTTGTACCTGACTCGATGTCTGTATGGAA TTTGTTGAGAGAATTCCGAATCAGGAAAGTGCACATGGCTATTGTATTGAATGAGTATGG CGGCGCTGTTGGTCTGGTTACCTTGGAAAATGTCGTGGAAGAAATTGTTGGAGAAATCTT TGATGAGAATGACTCAAAGGAAGAGATTCGTCGGAAAACAGGGTATATCGTGCAGAGAGC TGATGGTGTTTATGATGTCGATGCTAACACTTCAATTGAAGATTTGACCGATGCATTGGA GGTCAAACCTCCTGAGGTTCCCTATCACTATGAGACAGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54318 |
Definition |
sp|Q54318|HLYC_TREHY Hemolysin C OS=Treponema hyodysenteriae |
Align length |
164 |
Score (bit) |
105.0 |
E-value |
2.0e-22 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RFZ1 |
Definition |
tr|A9RFZ1|A9RFZ1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
173 |
Score (bit) |
289.0 |
E-value |
5.0e-77 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913208|Adiantum capillus-veneris mRNA, clone: YMU001_000027_F12. (519 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RFZ1|A9RFZ1_PHYPA Predicted protein (Fragment) OS=Physcomit... 289 5e-77 tr|A9S9B5|A9S9B5_PHYPA HO2c heme oxygenase OS=Physcomitrella pat... 278 2e-73 tr|Q9LK65|Q9LK65_ARATH Similarity to hemolysin OS=Arabidopsis th... 265 8e-70 tr|A7P0E1|A7P0E1_VITVI Chromosome chr19 scaffold_4, whole genome... 265 8e-70 tr|A5BGG1|A5BGG1_VITVI Putative uncharacterized protein OS=Vitis... 265 8e-70 tr|Q6ATT6|Q6ATT6_ORYSJ Transporter associated domain containing ... 263 3e-69 tr|Q10HC5|Q10HC5_ORYSJ CBS domain containing protein, expressed ... 263 3e-69 tr|Q0DQI6|Q0DQI6_ORYSJ Os03g0593200 protein OS=Oryza sativa subs... 263 3e-69 tr|B8ALN2|B8ALN2_ORYSI Putative uncharacterized protein OS=Oryza... 263 3e-69 tr|Q9LG18|Q9LG18_ARATH F14J16.20 OS=Arabidopsis thaliana PE=4 SV=1 261 2e-68 tr|Q84R21|Q84R21_ARATH Putative uncharacterized protein At1g5593... 259 7e-68 tr|A3AK27|A3AK27_ORYSJ Putative uncharacterized protein OS=Oryza... 251 2e-65 tr|A9T0P1|A9T0P1_PHYPA Predicted protein OS=Physcomitrella paten... 233 3e-60 tr|B7AA79|B7AA79_THEAQ Putative uncharacterized protein OS=Therm... 162 9e-39 tr|Q5SKB4|Q5SKB4_THET8 Hemolysin-related protein OS=Thermus ther... 154 2e-36 tr|Q72KM6|Q72KM6_THET2 Probable hemolysin-related protein/CBS do... 154 3e-36 tr|A4S4J2|A4S4J2_OSTLU Predicted protein (Fragment) OS=Ostreococ... 138 2e-31 tr|Q00Z43|Q00Z43_OSTTA CBS domain-containing protein / transport... 134 3e-30 tr|A7HLR9|A7HLR9_FERNB Putative uncharacterized protein OS=Fervi... 130 4e-29 tr|A6LN51|A6LN51_THEM4 Putative uncharacterized protein OS=Therm... 130 4e-29 tr|B6YME9|B6YME9_9BACT Putative uncharacterized protein OS=Therm... 129 7e-29 tr|B7IDY0|B7IDY0_9THEM Integral membrane protein with CBS domain... 128 2e-28 tr|Q8RDM6|Q8RDM6_FUSNN Magnesium and cobalt efflux protein CorC ... 125 1e-27 tr|A9BGT5|A9BGT5_PETMO Putative uncharacterized protein OS=Petro... 124 2e-27 tr|A5TWT4|A5TWT4_FUSNP Possible HCC HlyC/CorC family transporter... 122 8e-27 tr|A8F6Q9|A8F6Q9_THELT Putative uncharacterized protein OS=Therm... 122 1e-26 tr|Q7P7S7|Q7P7S7_FUSNV Magnesium and cobalt efflux protein corC ... 122 1e-26 tr|A7NHB2|A7NHB2_ROSCS CBS domain containing protein OS=Roseifle... 119 9e-26 tr|A5V1H5|A5V1H5_ROSS1 Putative uncharacterized protein OS=Rosei... 119 1e-25 tr|B8G983|B8G983_9CHLR CBS domain containing protein OS=Chlorofl... 118 2e-25
>tr|A9RFZ1|A9RFZ1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_201957 PE=4 SV=1 Length = 481
Score = 289 bits (740), Expect = 5e-77 Identities = 140/173 (80%), Positives = 160/173 (92%), Gaps = 1/173 (0%) Frame = +2
Query: 2 VDVVAIDSSATVMDFRNLWVTHQYSSVPVFERRVDNIVGIAYAMDMLDYVEQVEVLQKLT 181 +DVVAIDS+AT+++FRNLWV QYS VPVFERR+DNIVG+AY MDMLDYVEQ E+LQ++ Sbjct: 221 IDVVAIDSAATLLEFRNLWVKQQYSRVPVFERRIDNIVGLAYPMDMLDYVEQTELLQRMN 280
Query: 182 VGRIAHKPAYFVPDSMSVWNLLREFRIRKVHMAIVLNEYGGAVGLVTLENVVEEIVGEIF 361 VGRIAHKPAYFVPDSMSVWNLLREFRIRKVHMAIVLNEYGG VG+VTLE+VVEEIVGEIF Sbjct: 281 VGRIAHKPAYFVPDSMSVWNLLREFRIRKVHMAIVLNEYGGTVGVVTLEDVVEEIVGEIF 340
Query: 362 DENDSKEEIRRKTGYIVQRADGVYDVDANTSIEDLTDALEVKPPEVPYH-YET 517 DENDSKEEIR+KTGY+VQRADGV+D+DANT++EDL +ALE+K PE H YET Sbjct: 341 DENDSKEEIRKKTGYVVQRADGVFDIDANTAVEDLKEALEIKLPEQGSHRYET 393
>tr|A9S9B5|A9S9B5_PHYPA HO2c heme oxygenase OS=Physcomitrella patens subsp. patens GN=HO2c PE=4 SV=1 Length = 1050
Score = 278 bits (710), Expect = 2e-73 Identities = 140/176 (79%), Positives = 155/176 (88%), Gaps = 4/176 (2%) Frame = +2
Query: 2 VDVVAIDSSATVMDFRNLWVTHQYSSVPVFERRVDNIVGIAYAMDMLDYVEQVEVLQKLT 181 VDVVAIDS+AT+++FRNLWV HQYS VPVFERR+DNIVGIAYAMDMLDYVEQVE+LQ++ Sbjct: 601 VDVVAIDSAATLLEFRNLWVKHQYSRVPVFERRIDNIVGIAYAMDMLDYVEQVELLQRMN 660
Query: 182 VGRIAHKPAYFVPDSMSVWNLLREFRIRKVHMAIVLNEYGGAVGLVTLENVVEEIVGEIF 361 VGRIAH+PAYFVPDSMSVWNLLREFRIRKVHMAIVLNEYGG VG+VTLE+VVEEIVGEIF Sbjct: 661 VGRIAHRPAYFVPDSMSVWNLLREFRIRKVHMAIVLNEYGGTVGVVTLEDVVEEIVGEIF 720
Query: 362 DENDSKEEIRRKTGYIVQRADGVYDVDANTSIEDLTDALEVKPPEVPY----HYET 517 DENDSKEEIR+KTGY+VQRADGV+DVDANT DA +VP HYET Sbjct: 721 DENDSKEEIRKKTGYVVQRADGVFDVDANTQAIRQIDASLSVIVDVPVVGSNHYET 776
>tr|Q9LK65|Q9LK65_ARATH Similarity to hemolysin OS=Arabidopsis thaliana GN=At3g13070 PE=4 SV=1 Length = 661
Score = 265 bits (678), Expect = 8e-70 Identities = 127/172 (73%), Positives = 155/172 (90%) Frame = +2
Query: 2 VDVVAIDSSATVMDFRNLWVTHQYSSVPVFERRVDNIVGIAYAMDMLDYVEQVEVLQKLT 181 VDVVAID+SA+++DF ++WVTHQYS VPVFE+R+DNIVGIAYAMD+LDYV++ ++L+ + Sbjct: 363 VDVVAIDASASLVDFHSMWVTHQYSRVPVFEQRIDNIVGIAYAMDLLDYVQKGDLLESTS 422
Query: 182 VGRIAHKPAYFVPDSMSVWNLLREFRIRKVHMAIVLNEYGGAVGLVTLENVVEEIVGEIF 361 VG +AHKPAYFVPDSMSVWNLLREFRIRKVHMA+VLNEYGG +G+VTLE+VVEEIVGEIF Sbjct: 423 VGDMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTIGIVTLEDVVEEIVGEIF 482
Query: 362 DENDSKEEIRRKTGYIVQRADGVYDVDANTSIEDLTDALEVKPPEVPYHYET 517 DENDSKEEI++KTGYIV R +G+YDVDANTSI+ L++ L +K PE YET Sbjct: 483 DENDSKEEIQKKTGYIVMRDEGIYDVDANTSIDQLSEELNMKMPE-GIQYET 533
>tr|A7P0E1|A7P0E1_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027195001 PE=4 SV=1 Length = 669
Score = 265 bits (678), Expect = 8e-70 Identities = 126/172 (73%), Positives = 154/172 (89%) Frame = +2
Query: 2 VDVVAIDSSATVMDFRNLWVTHQYSSVPVFERRVDNIVGIAYAMDMLDYVEQVEVLQKLT 181 VDVVAID+SAT++DF LW+THQYS VPVFE+RVDNIVG+AYAMD+LDY+++ E+L+ Sbjct: 355 VDVVAIDASATLVDFHELWLTHQYSRVPVFEQRVDNIVGVAYAMDLLDYLQKGEILESSI 414
Query: 182 VGRIAHKPAYFVPDSMSVWNLLREFRIRKVHMAIVLNEYGGAVGLVTLENVVEEIVGEIF 361 VG +AHKPAYFVPDSMSVWNLLREFRIRKVHMA+VLNEYGG VG+VTLE+VVEEIVGEIF Sbjct: 415 VGDMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGIVTLEDVVEEIVGEIF 474
Query: 362 DENDSKEEIRRKTGYIVQRADGVYDVDANTSIEDLTDALEVKPPEVPYHYET 517 DENDSKEEI++KTGY+V + +G++DVDANTSI+ L++ L +K PE + YET Sbjct: 475 DENDSKEEIQKKTGYVVMKGEGIFDVDANTSIDQLSEDLNIKMPE-GHQYET 525
>tr|A5BGG1|A5BGG1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018001 PE=4 SV=1 Length = 723
Score = 265 bits (678), Expect = 8e-70 Identities = 126/172 (73%), Positives = 154/172 (89%) Frame = +2
Query: 2 VDVVAIDSSATVMDFRNLWVTHQYSSVPVFERRVDNIVGIAYAMDMLDYVEQVEVLQKLT 181 VDVVAID+SAT++DF LW+THQYS VPVFE+RVDNIVG+AYAMD+LDY+++ E+L+ Sbjct: 409 VDVVAIDASATLVDFHELWLTHQYSRVPVFEQRVDNIVGVAYAMDLLDYLQKGEILESSI 468
Query: 182 VGRIAHKPAYFVPDSMSVWNLLREFRIRKVHMAIVLNEYGGAVGLVTLENVVEEIVGEIF 361 VG +AHKPAYFVPDSMSVWNLLREFRIRKVHMA+VLNEYGG VG+VTLE+VVEEIVGEIF Sbjct: 469 VGDMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGIVTLEDVVEEIVGEIF 528
Query: 362 DENDSKEEIRRKTGYIVQRADGVYDVDANTSIEDLTDALEVKPPEVPYHYET 517 DENDSKEEI++KTGY+V + +G++DVDANTSI+ L++ L +K PE + YET Sbjct: 529 DENDSKEEIQKKTGYVVMKGEGIFDVDANTSIDQLSEDLNIKMPE-GHQYET 579
>tr|Q6ATT6|Q6ATT6_ORYSJ Transporter associated domain containing protein OS=Oryza sativa subsp. japonica GN=OSJNBb0056O10.5 PE=4 SV=1 Length = 608
Score = 263 bits (673), Expect = 3e-69 Identities = 129/172 (75%), Positives = 152/172 (88%) Frame = +2
Query: 2 VDVVAIDSSATVMDFRNLWVTHQYSSVPVFERRVDNIVGIAYAMDMLDYVEQVEVLQKLT 181 VDVVAID++AT++DF+NLW THQYS VPVFE R+DNIVGIAYAMDML+YVE+VE L+++T Sbjct: 367 VDVVAIDATATLIDFKNLWETHQYSRVPVFEERIDNIVGIAYAMDMLEYVEEVEKLKEIT 426
Query: 182 VGRIAHKPAYFVPDSMSVWNLLREFRIRKVHMAIVLNEYGGAVGLVTLENVVEEIVGEIF 361 V IAH P YFVPDSMSVWNLLREFRIR+VHMA+VLNEYGG +G+VTLE+VVEEIVGEIF Sbjct: 427 VKEIAHMPTYFVPDSMSVWNLLREFRIRQVHMAVVLNEYGGTIGIVTLEDVVEEIVGEIF 486
Query: 362 DENDSKEEIRRKTGYIVQRADGVYDVDANTSIEDLTDALEVKPPEVPYHYET 517 DENDSKEEI++KTGYIV DG +DVDANTSI+ L++ L VK PE + YET Sbjct: 487 DENDSKEEIQKKTGYIVMLDDGTFDVDANTSIDHLSEELGVKIPE-GHQYET 537
>tr|Q10HC5|Q10HC5_ORYSJ CBS domain containing protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g39640 PE=4 SV=1 Length = 680
Score = 263 bits (673), Expect = 3e-69 Identities = 129/172 (75%), Positives = 152/172 (88%) Frame = +2
Query: 2 VDVVAIDSSATVMDFRNLWVTHQYSSVPVFERRVDNIVGIAYAMDMLDYVEQVEVLQKLT 181 VDVVAID++AT++DF+NLW THQYS VPVFE R+DNIVGIAYAMDML+YVE+VE L+++T Sbjct: 367 VDVVAIDATATLIDFKNLWETHQYSRVPVFEERIDNIVGIAYAMDMLEYVEEVEKLKEIT 426
Query: 182 VGRIAHKPAYFVPDSMSVWNLLREFRIRKVHMAIVLNEYGGAVGLVTLENVVEEIVGEIF 361 V IAH P YFVPDSMSVWNLLREFRIR+VHMA+VLNEYGG +G+VTLE+VVEEIVGEIF Sbjct: 427 VKEIAHMPTYFVPDSMSVWNLLREFRIRQVHMAVVLNEYGGTIGIVTLEDVVEEIVGEIF 486
Query: 362 DENDSKEEIRRKTGYIVQRADGVYDVDANTSIEDLTDALEVKPPEVPYHYET 517 DENDSKEEI++KTGYIV DG +DVDANTSI+ L++ L VK PE + YET Sbjct: 487 DENDSKEEIQKKTGYIVMLDDGTFDVDANTSIDHLSEELGVKIPE-GHQYET 537
>tr|Q0DQI6|Q0DQI6_ORYSJ Os03g0593200 protein OS=Oryza sativa subsp. japonica GN=Os03g0593200 PE=4 SV=1 Length = 598
Score = 263 bits (673), Expect = 3e-69 Identities = 129/172 (75%), Positives = 152/172 (88%) Frame = +2
Query: 2 VDVVAIDSSATVMDFRNLWVTHQYSSVPVFERRVDNIVGIAYAMDMLDYVEQVEVLQKLT 181 VDVVAID++AT++DF+NLW THQYS VPVFE R+DNIVGIAYAMDML+YVE+VE L+++T Sbjct: 367 VDVVAIDATATLIDFKNLWETHQYSRVPVFEERIDNIVGIAYAMDMLEYVEEVEKLKEIT 426
Query: 182 VGRIAHKPAYFVPDSMSVWNLLREFRIRKVHMAIVLNEYGGAVGLVTLENVVEEIVGEIF 361 V IAH P YFVPDSMSVWNLLREFRIR+VHMA+VLNEYGG +G+VTLE+VVEEIVGEIF Sbjct: 427 VKEIAHMPTYFVPDSMSVWNLLREFRIRQVHMAVVLNEYGGTIGIVTLEDVVEEIVGEIF 486
Query: 362 DENDSKEEIRRKTGYIVQRADGVYDVDANTSIEDLTDALEVKPPEVPYHYET 517 DENDSKEEI++KTGYIV DG +DVDANTSI+ L++ L VK PE + YET Sbjct: 487 DENDSKEEIQKKTGYIVMLDDGTFDVDANTSIDHLSEELGVKIPE-GHQYET 537
>tr|B8ALN2|B8ALN2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12456 PE=4 SV=1 Length = 502
Score = 263 bits (673), Expect = 3e-69 Identities = 129/172 (75%), Positives = 152/172 (88%) Frame = +2
Query: 2 VDVVAIDSSATVMDFRNLWVTHQYSSVPVFERRVDNIVGIAYAMDMLDYVEQVEVLQKLT 181 VDVVAID++AT++DF+NLW THQYS VPVFE R+DNIVGIAYAMDML+YVE+VE L+++T Sbjct: 187 VDVVAIDATATLIDFKNLWETHQYSRVPVFEERIDNIVGIAYAMDMLEYVEEVEKLKEIT 246
Query: 182 VGRIAHKPAYFVPDSMSVWNLLREFRIRKVHMAIVLNEYGGAVGLVTLENVVEEIVGEIF 361 V IAH P YFVPDSMSVWNLLREFRIR+VHMA+VLNEYGG +G+VTLE+VVEEIVGEIF Sbjct: 247 VKEIAHMPTYFVPDSMSVWNLLREFRIRQVHMAVVLNEYGGTIGIVTLEDVVEEIVGEIF 306
Query: 362 DENDSKEEIRRKTGYIVQRADGVYDVDANTSIEDLTDALEVKPPEVPYHYET 517 DENDSKEEI++KTGYIV DG +DVDANTSI+ L++ L VK PE + YET Sbjct: 307 DENDSKEEIQKKTGYIVMLDDGTFDVDANTSIDHLSEELGVKIPE-GHQYET 357
>tr|Q9LG18|Q9LG18_ARATH F14J16.20 OS=Arabidopsis thaliana PE=4 SV=1 Length = 930
Score = 261 bits (666), Expect = 2e-68 Identities = 126/172 (73%), Positives = 151/172 (87%) Frame = +2
Query: 2 VDVVAIDSSATVMDFRNLWVTHQYSSVPVFERRVDNIVGIAYAMDMLDYVEQVEVLQKLT 181 VDVVAID S +++DF N WVTHQYS VPVFE+R+DNIVGIAYAMD+LDYV + ++L+ T Sbjct: 635 VDVVAIDGSGSLVDFHNFWVTHQYSRVPVFEQRIDNIVGIAYAMDLLDYVPKGKLLESTT 694
Query: 182 VGRIAHKPAYFVPDSMSVWNLLREFRIRKVHMAIVLNEYGGAVGLVTLENVVEEIVGEIF 361 V +AHKPA+FVPDSMSVWNLLREFRIRKVHMA+VLNEYGG +G+VTLE+VVEEIVGEIF Sbjct: 695 VVDMAHKPAFFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTIGIVTLEDVVEEIVGEIF 754
Query: 362 DENDSKEEIRRKTGYIVQRADGVYDVDANTSIEDLTDALEVKPPEVPYHYET 517 DENDSKEEI++KTGYIV RA+G+YDVDANTSI+ L++ L +K E + YET Sbjct: 755 DENDSKEEIQKKTGYIVMRAEGIYDVDANTSIDQLSEELNIKMAE-GHQYET 805
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