BP913212
Clone id YMU001_000027_G04
Library
Length 434
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000027_G04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTGTTTTTTTTTTTTTGAAAAGGAGCTCTCTCAGCCCCTCTAATACTCCTTTAACAGAA
CATTAGGTCTAATAACAGTAACTAGGAATGAGTATATCTCTGATTAGGAGAAGCACCCTT
GTGGACTCCATCTCACTTTGACCCATGTAGGTGTGCAGCACTACACCATATATACATTTG
AATCCATCAGATAGAATGCCCACCATTGCTATAAAAATGAATGAATGAAATACCAAAACT
AATCTTCACAAGTAGAACAATGAACTAAAGGAAATCTTAGCCTTCTGCTCTCACTGATCA
GAACCTTGCTTGGAGAGTTTTCCTTGGAAAAACCTAGCAAAACTTCCTTTCAATTTACCC
TTTTTCTGGGTGGTGGAGGAAGTATCTCCGGTATCTCCAGCTGCAAGCTCCAAATCCTCT
GCAAGTTGCTGCCC
■■Homology search results ■■ -
sp_hit_id P10870
Definition sp|P10870|SNF3_YEAST High-affinity glucose transporter SNF3 OS=Saccharomyces cerevisiae
Align length 53
Score (bit) 30.4
E-value 2.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913212|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_G04.
(404 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P10870|SNF3_YEAST High-affinity glucose transporter SNF3 OS=S... 30 2.8
sp|Q1I5F3|NDPA_PSEE4 Nucleoid-associated protein ndpA OS=Pseudom... 29 6.3

>sp|P10870|SNF3_YEAST High-affinity glucose transporter SNF3
OS=Saccharomyces cerevisiae GN=SNF3 PE=1 SV=3
Length = 884

Score = 30.4 bits (67), Expect = 2.8
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = -3

Query: 399 DLELAAGDTGDTSSTTQKKGKLKGSFARFFQGKLSKQGSDQ*EQKAKISFSSL 241
D E G+T D +T Q +K A+F Q + K+G + E ++ I +SL
Sbjct: 799 DEEANGGETSDNLNTAQDLAGMKERMAQFAQSYIDKRGGLEPETQSNILSTSL 851


>sp|Q1I5F3|NDPA_PSEE4 Nucleoid-associated protein ndpA
OS=Pseudomonas entomophila (strain L48) GN=ndpA PE=3
SV=1
Length = 335

Score = 29.3 bits (64), Expect = 6.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3

Query: 282 QNLAWRVFLGKT*QNFLSIYPFSGWWRKYL 371
Q AW +F G++ YPFSGW ++YL
Sbjct: 50 QGKAWGLFHGES-----GAYPFSGWLKQYL 74


tr_hit_id Q2ABG5
Definition tr|Q2ABG5|Q2ABG5_9MOLL NADH-ubiquinone oxidoreductase chain 1 OS=Octopus ocellatus
Align length 55
Score (bit) 32.7
E-value 9.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913212|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_G04.
(404 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q2ABG5|Q2ABG5_9MOLL NADH-ubiquinone oxidoreductase chain 1 OS... 33 9.4

>tr|Q2ABG5|Q2ABG5_9MOLL NADH-ubiquinone oxidoreductase chain 1
OS=Octopus ocellatus GN=ND1 PE=3 SV=1
Length = 313

Score = 32.7 bits (73), Expect = 9.4
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = -3

Query: 252 FSSLFYL*RLVLVFHSFIFIAMVGILSDGFKCIYGVVLHTYMGQSEMESTRVLLL 88
F SLF+ L ++F+S+ F+ M G+ F C+ V +++ MG +++ LL
Sbjct: 78 FLSLFFCLLLWMLFNSYFFVNMGGMSMMLFLCVSSVGVYSVMGAGWFSNSKYALL 132