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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913218
Clone id YMU001_000027_G10
Library
Length 527
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000027_G10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTGAAGAGCACCCAAGGAGTAAATAGGCCAAGTCCCATTGACTTTGAAGCAATTTAAGGC
TATTAGAGACCAAGAGATGGATTTAAGCAAAGTGACTGCTTGATTTGACTATGTCTAGCA
CAATAGGTGTTGAAATTAAATTCTGCAAGTGGTAGTGAGTTTCAAGTGTGGTGGAGATCC
TCTGGAATGAGATTCACTCCATTTTGACAAGATAGACTATTCTCGTTTCTCGGCTCTGCA
GTAGTATGTTCTTTGCTTTGTTCTTTGGAAGCCATTTCTTATCTATTGTACATAAGGGTT
GGTTGCCCTTAGCTTGTAGGTACGTTGCTAATGGTTGGACGTACTACTGTTGCAAATGGA
ACTACTTGTTTTTTGGTTTTGTGCTGAATATTGATAGTATTAGAGCTCCAATCAATTTGT
ACATTGTACTTTCACTGCTATGGATGTCCCAGTAAACAATGGATGCTATGTTGGCTTATC
TTCTACCACATAAAACGTATGCGGATAGATATATTGATTAACCTATA
■■Homology search results ■■ -
sp_hit_id Q68VV0
Definition sp|Q68VV0|ACON_RICTY Aconitate hydratase OS=Rickettsia typhi
Align length 45
Score (bit) 32.0
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913218|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_G10.
         (527 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q68VV0|ACON_RICTY Aconitate hydratase OS=Rickettsia typhi GN=...    32   1.9  
sp|P08174|DAF_HUMAN Complement decay-accelerating factor OS=Homo...    32   2.4  
sp|Q9ZCF4|ACON_RICPR Aconitate hydratase OS=Rickettsia prowazeki...    31   4.1  
sp|Q12117|MRH1_YEAST Protein MRH1 OS=Saccharomyces cerevisiae GN...    30   7.1  
sp|P47548|Y306_MYCGE Uncharacterized protein MG306 OS=Mycoplasma...    30   9.2  
sp|P32486|KRE6_YEAST Beta-glucan synthesis-associated protein KR...    30   9.2  
sp|P49457|DAF_PONPY Complement decay-accelerating factor (Fragme...    30   9.2  
sp|Q8HMZ7|CYB_SCHJP Cytochrome b OS=Schizosaccharomyces japonicu...    30   9.2  

>sp|Q68VV0|ACON_RICTY Aconitate hydratase OS=Rickettsia typhi
           GN=acnA PE=3 SV=1
          Length = 878

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +3

Query: 384 LNIDSIRAPINLYIVLSLLWMSQ*TMDAMLAYLLPHKTYADRYID 518
           LNID    PI   I L  +W SQ  +DA++A  +    + ++Y D
Sbjct: 555 LNIDLTTTPIGANIYLKDIWPSQKEIDAVIANSINPSMFIEKYAD 599


>sp|P08174|DAF_HUMAN Complement decay-accelerating factor OS=Homo
           sapiens GN=CD55 PE=1 SV=4
          Length = 381

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 21/61 (34%), Positives = 30/61 (49%)
 Frame = -1

Query: 479 ISQHSIHCLLGHP*Q*KYNVQIDWSSNTINIQHKTKKQVVPFATVVRPTISNVPTS*GQP 300
           I +HSI+C +        N + +WS      + K+    VP  TV +PT  NVPT+   P
Sbjct: 260 IGEHSIYCTVN-------NDEGEWSGPPPECRGKSLTSKVP-PTVQKPTTVNVPTTEVSP 311

Query: 299 T 297
           T
Sbjct: 312 T 312


>sp|Q9ZCF4|ACON_RICPR Aconitate hydratase OS=Rickettsia prowazekii
           GN=acnA PE=3 SV=1
          Length = 878

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 384 LNIDSIRAPINLYIVLSLLWMSQ*TMDAMLAYLLPHKTYADRYID 518
           LNID    PI   I L  +W SQ  +D ++A  +    + ++Y D
Sbjct: 555 LNIDLTNTPIGANIYLKDIWPSQKEIDEVIANSINSSMFIEKYAD 599


>sp|Q12117|MRH1_YEAST Protein MRH1 OS=Saccharomyces cerevisiae
           GN=MRH1 PE=1 SV=1
          Length = 320

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 336 WTYYCCKWNYLFFGFVLNIDSIRAPIN 416
           WT +CC   YL FG +L     R P+N
Sbjct: 37  WTCFCC---YLLFGLILTFLMFRKPVN 60


>sp|P47548|Y306_MYCGE Uncharacterized protein MG306 OS=Mycoplasma
           genitalium GN=MG306 PE=4 SV=1
          Length = 393

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
 Frame = +3

Query: 300 WLPLACRYVANGWTYYCCKWNYLFFGFVLNIDSIRAPINL-YIVLSLLWMSQ*TMDAMLA 476
           W  +   +V+  + +Y   W +L FGFV+    I  P++L      L W  +  M    A
Sbjct: 72  WNVIINWWVSRRFCFYASWWEWLLFGFVVQFFQIVTPLSLGQDPFRLYWFIKKGMKKQTA 131

Query: 477 YLLPHKTYA 503
            L+   T A
Sbjct: 132 VLIVTSTGA 140


>sp|P32486|KRE6_YEAST Beta-glucan synthesis-associated protein KRE6
           OS=Saccharomyces cerevisiae GN=KRE6 PE=1 SV=2
          Length = 720

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 324 VANGWTYYCCKWNYLFFGFVLNIDSIR 404
           ++N W Y    W Y+FF  V++ID +R
Sbjct: 633 ISNNWAYI--DWQYIFFPVVMSIDYVR 657


>sp|P49457|DAF_PONPY Complement decay-accelerating factor (Fragment)
           OS=Pongo pygmaeus GN=CD55 PE=2 SV=1
          Length = 340

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 20/61 (32%), Positives = 29/61 (47%)
 Frame = -1

Query: 479 ISQHSIHCLLGHP*Q*KYNVQIDWSSNTINIQHKTKKQVVPFATVVRPTISNVPTS*GQP 300
           I +HSI+C +          + +WS      + K+    VP  TV +PT  NVPT+   P
Sbjct: 219 IGEHSIYCTVNDD-------EGEWSGPPPECRGKSLTSKVP-PTVQKPTTVNVPTTEVSP 270

Query: 299 T 297
           T
Sbjct: 271 T 271


>sp|Q8HMZ7|CYB_SCHJP Cytochrome b OS=Schizosaccharomyces japonicus
           GN=cob PE=3 SV=1
          Length = 389

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 33/119 (27%), Positives = 48/119 (40%), Gaps = 10/119 (8%)
 Frame = +3

Query: 165 SVVEILWNEIHSILTR*TILVSRLCSSMFFALFFGSH----FLSIVH------KGWLPLA 314
           S +   WN   S+L   T+L  ++ S +F A+F+  H    FLS+ H       GWL   
Sbjct: 24  SNINYFWN-FGSLLA--TVLGIQILSGIFLAMFYTPHFDLAFLSVEHIMREVNYGWL--- 77

Query: 315 CRYVANGWTYYCCKWNYLFFGFVLNIDSIRAPINLYIVLSLLWMSQ*TMDAMLAYLLPH 491
            RY+      +   + YL     L   S R P  L   +         + A L Y LP+
Sbjct: 78  IRYMHATGASFFFAFLYLHIARGLFYGSYRRPRTLTWTIGTAIFFLTILTAFLGYTLPN 136
tr_hit_id B3QUY0
Definition tr|B3QUY0|B3QUY0_CHLT3 Putative uncharacterized protein OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78)
Align length 34
Score (bit) 35.0
E-value 2.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913218|Adiantum capillus-veneris mRNA, clone:
YMU001_000027_G10.
         (527 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3QUY0|B3QUY0_CHLT3 Putative uncharacterized protein OS=Chlor...    35   2.3  
tr|Q5GH41|Q5GH41_DANRE XK-related protein 5 OS=Danio rerio PE=2 ...    33   8.8  
tr|Q7Q6G7|Q7Q6G7_ANOGA AGAP005856-PA OS=Anopheles gambiae GN=AGA...    33   8.8  
tr|B3M1V8|B3M1V8_DROAN GF17871 OS=Drosophila ananassae GN=GF1787...    33   8.8  
tr|Q972H7|Q972H7_SULTO 683aa long hypothetical 5-methylcytosine-...    33   8.8  

>tr|B3QUY0|B3QUY0_CHLT3 Putative uncharacterized protein
           OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78)
           GN=Ctha_2029 PE=4 SV=1
          Length = 360

 Score = 35.0 bits (79), Expect = 2.3
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = +3

Query: 246 MFFALFFGSHFLSIVHKGWLPLACRYVANGWTYY 347
           MF ALFFG H+ S  +  W+P++C  V  G T Y
Sbjct: 203 MFLALFFG-HWFSFKNPYWIPISCAAVMQGATLY 235


>tr|Q5GH41|Q5GH41_DANRE XK-related protein 5 OS=Danio rerio PE=2
           SV=1
          Length = 622

 Score = 33.1 bits (74), Expect = 8.8
 Identities = 17/65 (26%), Positives = 29/65 (44%)
 Frame = +3

Query: 192 IHSILTR*TILVSRLCSSMFFALFFGSHFLSIVHKGWLPLACRYVANGWTYYCCKWNYLF 371
           +  +L R  +L +R  S   F   FG   + ++   WL  A   V+     Y  +W++  
Sbjct: 171 LSQLLWRTGMLAARFTSLALFTRTFGCWLIGVIASHWLMAALWLVSQQTDIYVGQWSWRV 230

Query: 372 FGFVL 386
           F F+L
Sbjct: 231 FNFIL 235


>tr|Q7Q6G7|Q7Q6G7_ANOGA AGAP005856-PA OS=Anopheles gambiae
           GN=AGAP005856 PE=4 SV=4
          Length = 1212

 Score = 33.1 bits (74), Expect = 8.8
 Identities = 25/74 (33%), Positives = 38/74 (51%)
 Frame = -1

Query: 410 WSSNTINIQHKTKKQVVPFATVVRPTISNVPTS*GQPTLMYNR*EMASKEQSKEHTTAEP 231
           W SNT+ I  KT K+ VP A V    I ++ +S G  T+ Y   + A++E+    T A P
Sbjct: 557 WQSNTVKINIKTAKESVP-AFVQTGYIVSILSSHG-ATMAYRYKDTAAREE----TGATP 610

Query: 230 RNENSLSCQNGVNL 189
             E  +    G+N+
Sbjct: 611 SKEEEIVLTAGMNM 624


>tr|B3M1V8|B3M1V8_DROAN GF17871 OS=Drosophila ananassae GN=GF17871
            PE=4 SV=1
          Length = 2135

 Score = 33.1 bits (74), Expect = 8.8
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
 Frame = -1

Query: 422  VQIDWSSNTINIQHKTKKQVVPFATVVRPTISNVPTS*--GQPTLMYNR*EMASKEQSKE 249
            VQ   S +T  +Q     ++ P   V      N+P     G+P+ +     MASK +SK+
Sbjct: 1167 VQQTRSGSTEKVQILNCLEIAPNGAVTERVFQNLPQHILTGKPSPLKQTQSMASKRESKQ 1226

Query: 248  HTTAEPRNENSLSCQNGVNLIPED 177
             T  +P    + +  NG  L+PE+
Sbjct: 1227 KTPKKPEVNKTGTSSNG--LVPEN 1248


>tr|Q972H7|Q972H7_SULTO 683aa long hypothetical
           5-methylcytosine-specific restriction enzyme
           OS=Sulfolobus tokodaii GN=ST1153 PE=4 SV=1
          Length = 683

 Score = 33.1 bits (74), Expect = 8.8
 Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
 Frame = -2

Query: 475 ANIASIVYWDIHSSES--TMYK-LIGALILSIFSTK--PKNK*FHLQQ*YVQPLATYLQA 311
           A IA++V  +++ +E   T Y+ L+G + +  +  K   KNK   +Q  Y Q ++T L  
Sbjct: 310 AVIAALVSLELYDNEELKTAYRNLVGDITIYEYVIKYPQKNKAQQIQAQYSQ-ISTVLCN 368

Query: 310 KGNQPLCTIDKKWLPKNKAKNILLQS 233
           KG+Q    +D  +LP+N + NI+L S
Sbjct: 369 KGSQ--IKVDDLYLPQNNSLNIILSS 392