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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913238
Clone id YMU001_000028_A08
Library
Length 284
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000028_A08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GTACATCTTCACCTTTCCTTCCACAAAAGCAATATAGATGATAAACCTCACTTGATATCC
ATTGTGAAATATTGATCAACCTTTGCGCTTTTGAATATGTAACCACCTCCCAAATCTCTA
TCTGAAGGTACTCAAACTAGCTCCTCAGTGGCGGGGCACCAAAAACATGACAGGGAAAAG
TGAACGCGGGGCACTTCTATAGCTTAGCCTCCCTTGCAGTTTGAGAACACACTACCTATC
TCTCAAAACACCTGCAAGCTGCATGCAACAACACCAAGAGATCT
■■Homology search results ■■ -
sp_hit_id P84770
Definition sp|P84770|IRS1B_XENLA Insulin receptor substrate 1-B OS=Xenopus laevis
Align length 51
Score (bit) 30.0
E-value 3.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913238|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_A08.
         (284 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P84770|IRS1B_XENLA Insulin receptor substrate 1-B OS=Xenopus ...    30   3.7  
sp|Q91615|IRS1A_XENLA Insulin receptor substrate 1-A OS=Xenopus ...    30   3.7  

>sp|P84770|IRS1B_XENLA Insulin receptor substrate 1-B OS=Xenopus
           laevis GN=irs1-B PE=2 SV=1
          Length = 1088

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +1

Query: 124 EGTQTSSSVAGHQKHDREK*TRGTSIA*PPLQFENTLPISQNTCKLHATTP 276
           EG+  S S +  Q H      RG+S   PPL    ++P+    C   AT+P
Sbjct: 339 EGSPVSPSASRTQSHRH----RGSSRLHPPLNHSRSIPMPATRCSPSATSP 385


>sp|Q91615|IRS1A_XENLA Insulin receptor substrate 1-A OS=Xenopus
           laevis GN=irs1-A PE=1 SV=1
          Length = 885

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +1

Query: 124 EGTQTSSSVAGHQKHDREK*TRGTSIA*PPLQFENTLPISQNTCKLHATTP 276
           EG+  S S +  Q H      RG+S   PPL    ++P+    C   AT+P
Sbjct: 136 EGSPVSPSASRTQSHRH----RGSSRLHPPLNHSRSIPMPATRCSPSATSP 182
tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913238|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_A08.
         (284 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******