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NBDC - LSDB Archive
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BP913241
Clone id YMU001_000028_A12
Library
Length 318
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000028_A12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTACATTCCCAATCCTTCTGCAAGCTGCAAGCAGAGAAGTCCAACCTACCACATTCGACA
TAATCGGAAGGCATTCAAGCATCTCTTCTGCTTCTTGGAAACAGCCAGCATGACAGAAAA
GACCTACCATCAAATTGTAGTATTTAATTGAGATGGCAATACGACGCTCTCGCATGAGCT
TGAAGTGGTGCACACCTTGATCAACTTGCCCTGCATGACTACAGGCAGATAGAAGACACA
TGAATGTGACATCATCTGGCTGCAATCCTGAACTGCAGAGGTCACTAAAACATTCCAAAG
CGTGCTCATACTGATTAT
■■Homology search results ■■ -
sp_hit_id Q9SJG6
Definition sp|Q9SJG6|PP200_ARATH Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana
Align length 103
Score (bit) 98.6
E-value 8.0e-21
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913241|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_A12.
         (318 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9SJG6|PP200_ARATH Pentatricopeptide repeat-containing protei...    99   8e-21
sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protei...    91   2e-18
sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protei...    89   7e-18
sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containi...    83   5e-16
sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protei...    82   8e-16
sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protei...    82   8e-16
sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protei...    80   2e-15
sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containi...    80   2e-15
sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protei...    80   3e-15
sp|P0C8Q8|PP394_ARATH Pentatricopeptide repeat-containing protei...    80   3e-15
sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protei...    80   4e-15
sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protei...    80   4e-15
sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protei...    79   7e-15
sp|Q9LXF2|PP385_ARATH Pentatricopeptide repeat-containing protei...    78   2e-14
sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protei...    77   2e-14
sp|Q9FMA1|PP433_ARATH Pentatricopeptide repeat-containing protei...    77   2e-14
sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protei...    77   2e-14
sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protei...    77   3e-14
sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protei...    77   3e-14
sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protei...    77   3e-14
sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protei...    76   6e-14
sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protei...    76   6e-14
sp|Q9MAT2|PPR10_ARATH Pentatricopeptide repeat-containing protei...    75   8e-14
sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containi...    75   1e-13
sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protei...    75   1e-13
sp|Q9FI49|PP428_ARATH Pentatricopeptide repeat-containing protei...    75   1e-13
sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protei...    75   1e-13
sp|Q3ECB8|PP128_ARATH Pentatricopeptide repeat-containing protei...    75   1e-13
sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protei...    74   2e-13
sp|Q9FNN7|PP371_ARATH Pentatricopeptide repeat-containing protei...    74   2e-13

>sp|Q9SJG6|PP200_ARATH Pentatricopeptide repeat-containing protein
           At2g42920, chloroplastic OS=Arabidopsis thaliana
           GN=PCMP-E75 PE=2 SV=1
          Length = 559

 Score = 98.6 bits (244), Expect = 8e-21
 Identities = 48/103 (46%), Positives = 75/103 (72%), Gaps = 1/103 (0%)
 Frame = -3

Query: 307 EHALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRER-RIAISIKYYNL 131
           E A++ FS+L  SGL+PD V+F+ +L+AC+H+G+V +    F+LM+E+  I  SIK+Y L
Sbjct: 341 ERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTL 400

Query: 130 MVGLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIGNV 2
           MV +   AG  +EAE +++ +P+  + V W+SLL+ACR+IGNV
Sbjct: 401 MVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNV 443



 Score = 52.0 bits (123), Expect = 9e-07
 Identities = 23/95 (24%), Positives = 49/95 (51%)
 Frame = -3

Query: 313 QYEHALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRERRIAISIKYYN 134
           +++ AL+ F ++    ++PD  T + LL+AC++ G  +QG    + +   R  ++     
Sbjct: 238 RFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVT 297

Query: 133 LMVGLFCHAGCFQEAEEMLECLPIMSNVVGWTSLL 29
            ++ ++C  GC +E   + EC P    +  W S++
Sbjct: 298 ALIDMYCKCGCIEEGLNVFECAP-KKQLSCWNSMI 331


>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein
           At2g22070 OS=Arabidopsis thaliana GN=PCMP-H41 PE=2 SV=1
          Length = 786

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 46/103 (44%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
 Frame = -3

Query: 307 EHALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRE-RRIAISIKYYNL 131
           E ALE F  +   GL+PD +T++ + SAC+HAG V+QG  +F +M++  +I  ++ +Y  
Sbjct: 497 EEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYAC 556

Query: 130 MVGLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIGNV 2
           MV LF  AG  QEA+E +E +PI  +VV W SLL+ACR   N+
Sbjct: 557 MVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNI 599



 Score = 29.6 bits (65), Expect = 4.8
 Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
 Frame = -3

Query: 301 ALECFSDLC-SSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRERRIAISIKYYNLMV 125
           AL+ FS +   S L PD  T   +LSAC++  ++  G      +      IS    N ++
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALI 321

Query: 124 GLFCHAGCFQEAEEMLECLPIMS-NVVGWTSLLAACRRIGNV 2
            ++   G  + A  ++E        + G+T+LL    ++G++
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDM 363


>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein
           At1g08070 OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
          Length = 741

 Score = 89.0 bits (219), Expect = 7e-18
 Identities = 43/101 (42%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
 Frame = -3

Query: 301 ALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLM-RERRIAISIKYYNLMV 125
           + + FS +   G+QPDD+TF+ LLSACSH+G +D G H F+ M ++ ++   +++Y  M+
Sbjct: 454 SFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMI 513

Query: 124 GLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIGNV 2
            L  H+G F+EAEEM+  + +  + V W SLL AC+  GNV
Sbjct: 514 DLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNV 554



 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 25/94 (26%), Positives = 51/94 (54%)
 Frame = -3

Query: 310 YEHALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRERRIAISIKYYNL 131
           Y+ ALE F D+  + ++PD+ T + ++SAC+ +G ++ G      + +     ++K  N 
Sbjct: 247 YKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNA 306

Query: 130 MVGLFCHAGCFQEAEEMLECLPIMSNVVGWTSLL 29
           ++ L+   G  + A  + E LP   +V+ W +L+
Sbjct: 307 LIDLYSKCGELETACGLFERLP-YKDVISWNTLI 339



 Score = 45.8 bits (107), Expect = 7e-05
 Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
 Frame = -3

Query: 316 NQYEHALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQG--VHHFKLMRERRIAISIK 143
           N Y+ AL  F ++  SG  P+DVT + +L AC+H G +D G  +H +   R + +  +  
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 405

Query: 142 YYNLMVGLFCHAGCFQEAEEMLECLPIMSNVVGWTSLL 29
               ++ ++   G  + A ++   + +  ++  W +++
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMI 442


>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing
           protein At1g68930 OS=Arabidopsis thaliana GN=PCMP-H22
           PE=3 SV=1
          Length = 743

 Score = 82.8 bits (203), Expect = 5e-16
 Identities = 41/100 (41%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
 Frame = -3

Query: 298 LECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMR-ERRIAISIKYYNLMVG 122
           ++ F  +   GL+PD VT   ++SACS AG V++G  +FKLM  E  I  SI +Y+ M+ 
Sbjct: 457 IQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMID 516

Query: 121 LFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIGNV 2
           LF  +G  +EA   +  +P   + +GWT+LL+ACR  GN+
Sbjct: 517 LFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNL 556



 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 23/100 (23%), Positives = 46/100 (46%)
 Frame = -3

Query: 307 EHALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRERRIAISIKYYNLM 128
           + A+ECF ++   GL+ D   F  +L AC   G +++G      +        I   + +
Sbjct: 252 KEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSAL 311

Query: 127 VGLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIG 8
           + ++C   C   A+ + + +    NVV WT+++    + G
Sbjct: 312 IDMYCKCKCLHYAKTVFDRMK-QKNVVSWTAMVVGYGQTG 350



 Score = 38.5 bits (88), Expect = 0.010
 Identities = 22/100 (22%), Positives = 47/100 (47%)
 Frame = -3

Query: 307 EHALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRERRIAISIKYYNLM 128
           E A++ F D+  SG+ PD  T    +SAC++   +++G           +   +   N +
Sbjct: 353 EEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSL 412

Query: 127 VGLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIG 8
           V L+   G   ++  +   + +  + V WT++++A  + G
Sbjct: 413 VTLYGKCGDIDDSTRLFNEMNV-RDAVSWTAMVSAYAQFG 451


>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein
           At3g22690 OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
          Length = 842

 Score = 82.0 bits (201), Expect = 8e-16
 Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
 Frame = -3

Query: 307 EHALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHF-KLMRERRIAISIKYYNL 131
           E A+E F D+   GL+PD V F+  L+ACSH G V QG   F  +++   ++    +Y  
Sbjct: 553 ERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGC 612

Query: 130 MVGLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIGNV 2
           MV L   AG  +EA +++E +P+  N V W SLLAACR  GNV
Sbjct: 613 MVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNV 655



 Score = 45.8 bits (107), Expect = 7e-05
 Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
 Frame = -3

Query: 310 YEHALECFSDLCSS-GLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRERRIAISIKYYN 134
           +E A+E F  + S  G+  D VT M + SAC H G +D     +  + +  I + ++   
Sbjct: 450 FEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGT 509

Query: 133 LMVGLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIGN 5
            +V +F   G  + A  +   L    +V  WT+ + A    GN
Sbjct: 510 TLVDMFSRCGDPESAMSIFNSL-TNRDVSAWTAAIGAMAMAGN 551



 Score = 39.7 bits (91), Expect = 0.005
 Identities = 26/96 (27%), Positives = 44/96 (45%)
 Frame = -3

Query: 301 ALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRERRIAISIKYYNLMVG 122
           A+  F  + +SG+ PD  TF   LSAC+ +     G+    L+ +   A  +   N +V 
Sbjct: 118 AILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVH 177

Query: 121 LFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRR 14
            +   G    A ++ + +    NVV WTS++    R
Sbjct: 178 FYAECGELDSARKVFDEMS-ERNVVSWTSMICGYAR 212



 Score = 30.0 bits (66), Expect = 3.7
 Identities = 12/62 (19%), Positives = 30/62 (48%)
 Frame = -3

Query: 259 PDDVTFMCLLSACSHAGQVDQGVHHFKLMRERRIAISIKYYNLMVGLFCHAGCFQEAEEM 80
           P+ VT +C++SAC+    ++ G   +  +R   I ++    + +V ++        A+ +
Sbjct: 234 PNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRL 293

Query: 79  LE 74
            +
Sbjct: 294 FD 295


>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein
           At2g22410, mitochondrial OS=Arabidopsis thaliana
           GN=PCMP-E28 PE=2 SV=1
          Length = 681

 Score = 82.0 bits (201), Expect = 8e-16
 Identities = 37/101 (36%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
 Frame = -3

Query: 301 ALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRER-RIAISIKYYNLMV 125
           A+  F+++  +G+ PD++TF+ LLSAC H G +  G  +F  M+ R  +   +K+Y++MV
Sbjct: 474 AISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMV 533

Query: 124 GLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIGNV 2
            L   AG  +EA+ ++E +P+ ++   W +LL  CR  GNV
Sbjct: 534 DLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNV 574



 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 28/100 (28%), Positives = 56/100 (56%)
 Frame = -3

Query: 307 EHALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRERRIAISIKYYNLM 128
           E A+  +  + S G++PDDVT + L+S+CS  G +++G   ++ ++E  + ++I   N +
Sbjct: 239 EKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNAL 298

Query: 127 VGLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIG 8
           + +F   G   EA  + + L     +V WT++++   R G
Sbjct: 299 MDMFSKCGDIHEARRIFDNLE-KRTIVSWTTMISGYARCG 337



 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 19/73 (26%), Positives = 40/73 (54%)
 Frame = -3

Query: 307 EHALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRERRIAISIKYYNLM 128
           + AL  F ++ +S  +PD++T +  LSACS  G +D G+   + + +  +++++     +
Sbjct: 371 QDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSL 430

Query: 127 VGLFCHAGCFQEA 89
           V ++   G   EA
Sbjct: 431 VDMYAKCGNISEA 443


>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic OS=Arabidopsis thaliana
           GN=EMB2261 PE=2 SV=1
          Length = 850

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
 Frame = -3

Query: 298 LECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRE-RRIAISIKYYNLMVG 122
           LE F+ +   G++P++VT++ +LSACSH G V +G  HF  M E  +I   +++Y  MV 
Sbjct: 560 LETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVD 619

Query: 121 LFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACR 17
           L C AG   +A E +  +P  ++V+ W + L ACR
Sbjct: 620 LLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACR 654



 Score = 32.7 bits (73), Expect = 0.57
 Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
 Frame = -3

Query: 301 ALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQG-VHHFKLMRERRIAISIKYYNLMV 125
           A++ F +    GL P+D  +  ++ ACS++  V  G V    LM+       +     ++
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209

Query: 124 GLFCHA-GCFQEAEEMLECLPIMSNVVGWTSLLAACRRIG 8
            +F      F+ A ++ + +  + NVV WT ++  C ++G
Sbjct: 210 DMFVKGENSFENAYKVFDKMSEL-NVVTWTLMITRCMQMG 248


>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing
           protein At3g47840 OS=Arabidopsis thaliana GN=PCMP-E43
           PE=3 SV=1
          Length = 706

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 38/103 (36%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
 Frame = -3

Query: 307 EHALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRER-RIAISIKYYNL 131
           + A++ F      G +PD VTF+ +L+AC+H+GQ+D G H+F +M+E   +  + ++Y  
Sbjct: 494 KEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGC 553

Query: 130 MVGLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIGNV 2
           MV L C AG   +AE+M+  +    + V WT+LL AC+  G++
Sbjct: 554 MVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDI 596



 Score = 40.4 bits (93), Expect = 0.003
 Identities = 29/102 (28%), Positives = 46/102 (45%)
 Frame = -3

Query: 313 QYEHALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRERRIAISIKYYN 134
           +Y+  L  FS++  S    D  TF   L AC+   QV  G      +  R    ++   N
Sbjct: 189 RYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVAN 248

Query: 133 LMVGLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIG 8
            +  ++   G  Q+   + E +    +VV WTSL+ A +RIG
Sbjct: 249 SLATMYTECGEMQDGLCLFENMS-ERDVVSWTSLIVAYKRIG 289


>sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protein
           At5g39680 OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1
          Length = 710

 Score = 80.1 bits (196), Expect = 3e-15
 Identities = 40/95 (42%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
 Frame = -3

Query: 301 ALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHF-KLMRERRIAISIKYYNLMV 125
           ALE F  +  +G  P+ +TF+ +L ACSH G V+QG+H+F +LM++  +   I++Y  +V
Sbjct: 423 ALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIV 482

Query: 124 GLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAAC 20
           GL   AG F++AE+ +   PI  +VV W +LL AC
Sbjct: 483 GLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNAC 517


>sp|P0C8Q8|PP394_ARATH Pentatricopeptide repeat-containing protein
           At5g19020, mitochondrial OS=Arabidopsis thaliana
           GN=PCMP-E42 PE=2 SV=1
          Length = 685

 Score = 80.1 bits (196), Expect = 3e-15
 Identities = 43/101 (42%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
 Frame = -3

Query: 301 ALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMR-ERRIAISIKYYNLMV 125
           AL+ +SDL S  ++P+ +TF+ +LSAC HAG V+ G  +F+ M+ +  I   IK+Y  MV
Sbjct: 526 ALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMV 585

Query: 124 GLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIGNV 2
            L   AG  +EA+EM++ +P+ ++V+ W  LL+A R  GNV
Sbjct: 586 DLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNV 626



 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 25/107 (23%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
 Frame = -3

Query: 316 NQYEHALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRERRIAISIK-- 143
           NQ+  A+E F ++ + G+  ++VT   ++SACSH G    G+   ++++   I + ++  
Sbjct: 152 NQWSEAMELFREMRNLGIMLNEVTLATVISACSHLG----GIWDCRMLQSLAIKLKLEGR 207

Query: 142 --YYNLMVGLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIG 8
                 ++ ++C   C ++A ++ + +P   N+V W  +L    + G
Sbjct: 208 VFVSTNLLHMYCLCLCLKDARKLFDEMP-ERNLVTWNVMLNGYSKAG 253
tr_hit_id A7QDF7
Definition tr|A7QDF7|A7QDF7_VITVI Chromosome chr10 scaffold_81, whole genome shotgun sequence OS=Vitis vinifera
Align length 103
Score (bit) 89.7
E-value 6.0e-17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913241|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_A12.
         (318 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7QDF7|A7QDF7_VITVI Chromosome chr10 scaffold_81, whole genom...    90   6e-17
tr|A7PJW3|A7PJW3_VITVI Chromosome chr12 scaffold_18, whole genom...    90   6e-17
tr|A7Q4V2|A7Q4V2_VITVI Chromosome chr10 scaffold_50, whole genom...    89   1e-16
tr|A5BWB7|A5BWB7_VITVI Putative uncharacterized protein OS=Vitis...    88   2e-16
tr|A7NWS0|A7NWS0_VITVI Chromosome chr5 scaffold_2, whole genome ...    88   2e-16
tr|Q8S2H6|Q8S2H6_ORYSJ cDNA clone:001-115-F08, full insert seque...    87   3e-16
tr|B8AAW0|B8AAW0_ORYSI Putative uncharacterized protein OS=Oryza...    87   3e-16
tr|A7P600|A7P600_VITVI Chromosome chr4 scaffold_6, whole genome ...    87   3e-16
tr|A7QHK7|A7QHK7_VITVI Chromosome chr5 scaffold_98, whole genome...    87   4e-16
tr|Q6YWP8|Q6YWP8_ORYSJ Os02g0730900 protein OS=Oryza sativa subs...    86   7e-16
tr|Q10PA0|Q10PA0_ORYSJ Pentatricopeptide, putative, expressed OS...    86   7e-16
tr|Q0DTK5|Q0DTK5_ORYSJ Os03g0241800 protein OS=Oryza sativa subs...    86   7e-16
tr|B8AJZ7|B8AJZ7_ORYSI Putative uncharacterized protein OS=Oryza...    86   7e-16
tr|A7QW88|A7QW88_VITVI Chromosome undetermined scaffold_200, who...    86   7e-16
tr|A7QGY9|A7QGY9_VITVI Chromosome chr3 scaffold_95, whole genome...    86   7e-16
tr|A7PL13|A7PL13_VITVI Chromosome chr7 scaffold_20, whole genome...    86   7e-16
tr|A3AFY8|A3AFY8_ORYSJ Putative uncharacterized protein OS=Oryza...    86   7e-16
tr|A2X992|A2X992_ORYSI Putative uncharacterized protein OS=Oryza...    86   7e-16
tr|B8LLJ0|B8LLJ0_PICSI Putative uncharacterized protein OS=Picea...    86   9e-16
tr|A5BYV5|A5BYV5_VITVI Putative uncharacterized protein OS=Vitis...    86   9e-16
tr|A2Q222|A2Q222_MEDTR Tetratricopeptide-like helical OS=Medicag...    86   9e-16
tr|A7PS02|A7PS02_VITVI Chromosome chr14 scaffold_27, whole genom...    86   1e-15
tr|A7PRP0|A7PRP0_VITVI Chromosome chr14 scaffold_27, whole genom...    86   1e-15
tr|A5AZY0|A5AZY0_VITVI Putative uncharacterized protein OS=Vitis...    86   1e-15
tr|Q0ZR48|Q0ZR48_THEHA Putative uncharacterized protein OS=Thell...    85   2e-15
tr|A7PUR6|A7PUR6_VITVI Chromosome chr4 scaffold_32, whole genome...    85   2e-15
tr|A7P9K4|A7P9K4_VITVI Chromosome chr3 scaffold_8, whole genome ...    85   2e-15
tr|Q8GRU0|Q8GRU0_ORYSJ Os07g0113500 protein OS=Oryza sativa subs...    85   2e-15
tr|A7QUT6|A7QUT6_VITVI Chromosome chr1 scaffold_180, whole genom...    85   2e-15
tr|A7Q334|A7Q334_VITVI Chromosome chr12 scaffold_47, whole genom...    85   2e-15

>tr|A7QDF7|A7QDF7_VITVI Chromosome chr10 scaffold_81, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00035822001
           PE=4 SV=1
          Length = 506

 Score = 89.7 bits (221), Expect = 6e-17
 Identities = 46/103 (44%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
 Frame = -3

Query: 307 EHALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLM-RERRIAISIKYYNL 131
           +HAL+ FS++   G +P++VTF+C+LSACS AG +D+G   F LM     I  +I++Y  
Sbjct: 324 QHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGC 383

Query: 130 MVGLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIGNV 2
           MV L    G  +EAEE+++ +P     V W SLL ACR  GNV
Sbjct: 384 MVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNV 426



 Score = 45.8 bits (107), Expect = 0.001
 Identities = 24/103 (23%), Positives = 51/103 (49%)
 Frame = -3

Query: 313 QYEHALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRERRIAISIKYYN 134
           ++   L  F D+  +G++PD+ T + +LSAC+H G + QG      + +  I+I      
Sbjct: 221 RFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVAT 280

Query: 133 LMVGLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIGN 5
            +V ++   G  ++A E+     +  ++  W S+++     G+
Sbjct: 281 ALVDMYSKCGSIEKALEVFNSC-LRKDISTWNSIISGLSTHGS 322


>tr|A7PJW3|A7PJW3_VITVI Chromosome chr12 scaffold_18, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00018905001
           PE=4 SV=1
          Length = 497

 Score = 89.7 bits (221), Expect = 6e-17
 Identities = 45/101 (44%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
 Frame = -3

Query: 301 ALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRER-RIAISIKYYNLMV 125
           A++ FS L  S L+PDDVTF+ +L+AC+++G VD+   +F LM +  +I  SIK+Y+ MV
Sbjct: 306 AIQLFSRLECSNLRPDDVTFVGVLTACNYSGLVDKAKEYFSLMSKTYKIEPSIKHYSCMV 365

Query: 124 GLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIGNV 2
                AG  +EAEE++  +P+  + + W+SLL+ACR+ GNV
Sbjct: 366 DTLGRAGLLEEAEELIRNMPVNPDAIIWSSLLSACRKHGNV 406


>tr|A7Q4V2|A7Q4V2_VITVI Chromosome chr10 scaffold_50, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00029859001
           PE=4 SV=1
          Length = 865

 Score = 88.6 bits (218), Expect = 1e-16
 Identities = 44/101 (43%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
 Frame = -3

Query: 301 ALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRER-RIAISIKYYNLMV 125
           +L  F  +   G+QPD VTF+ ++SAC HAGQVD+G+H+F+ M E   I   +++Y  MV
Sbjct: 627 SLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMV 686

Query: 124 GLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIGNV 2
            LF  AG   EA  M+  +P   +   W +LL ACR  GNV
Sbjct: 687 DLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNV 727



 Score = 37.0 bits (84), Expect = 0.49
 Identities = 18/95 (18%), Positives = 46/95 (48%)
 Frame = -3

Query: 310 YEHALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRERRIAISIKYYNL 131
           +++A   F ++  +   P+ VTF C+LS C+    ++ G     L+    + +     N 
Sbjct: 220 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 279

Query: 130 MVGLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLA 26
           ++ ++   G   +A  + + +P  +++V W  +++
Sbjct: 280 LLAMYAKCGHLFDARRLFDMMP-KTDLVTWNGMIS 313


>tr|A5BWB7|A5BWB7_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_020725 PE=4 SV=1
          Length = 713

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 44/100 (44%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
 Frame = -3

Query: 298 LECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRER-RIAISIKYYNLMVG 122
           ++ F  +   GL+PD VTF+ +LSACSHAG VD G H+F  M ++ +I+ S ++Y  M+ 
Sbjct: 505 IDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMID 564

Query: 121 LFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIGNV 2
           L C AG   +AE M+E +P   + V W++LL ACR  G+V
Sbjct: 565 LLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDV 604



 Score = 36.6 bits (83), Expect = 0.64
 Identities = 23/100 (23%), Positives = 47/100 (47%)
 Frame = -3

Query: 307 EHALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRERRIAISIKYYNLM 128
           + AL  FS++  S ++ D  TF   L AC+ +G ++ G        ++   +S    N +
Sbjct: 199 KEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTL 258

Query: 127 VGLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIG 8
             ++   G  +    + E +  M +VV WT+++    ++G
Sbjct: 259 ATMYNKCGKLEYGLTLFEKMS-MRDVVSWTTIITTLVQMG 297


>tr|A7NWS0|A7NWS0_VITVI Chromosome chr5 scaffold_2, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020033001
           PE=4 SV=1
          Length = 836

 Score = 87.8 bits (216), Expect = 2e-16
 Identities = 45/102 (44%), Positives = 65/102 (63%)
 Frame = -3

Query: 307 EHALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRERRIAISIKYYNLM 128
           E A   F+ +   G++PD V F+ +L+ACSH GQV+QG+H F LM +  I+  I++Y  M
Sbjct: 548 EGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCM 607

Query: 127 VGLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIGNV 2
           V L   AG  +EA ++++ +P+  N V W SLLAACR   NV
Sbjct: 608 VDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNV 649



 Score = 42.7 bits (99), Expect = 0.009
 Identities = 24/101 (23%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
 Frame = -3

Query: 307 EHALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRERRIAISIKYYNLM 128
           + A+  F ++  +G++P  VT +C++SAC+    +D G      + E  + ++    N +
Sbjct: 214 KEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNAL 273

Query: 127 VGLFCHAGCFQEAEEML-ECLPIMSNVVGWTSLLAACRRIG 8
           V ++   G    A+ +  EC  +  N+V + ++L+   R G
Sbjct: 274 VDMYMKCGAIDAAKRLFDEC--VDRNLVLYNTILSNYARQG 312


>tr|Q8S2H6|Q8S2H6_ORYSJ cDNA clone:001-115-F08, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0003D09.7 PE=2 SV=1
          Length = 440

 Score = 87.4 bits (215), Expect = 3e-16
 Identities = 42/102 (41%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
 Frame = -3

Query: 307 EHALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRER-RIAISIKYYNL 131
           E A++ F ++C SG+QP+++TF  +LSAC  AG VDQG   FKLM +      +I +Y  
Sbjct: 264 EKAIQLFEEMCRSGVQPNEMTFTAVLSACGQAGLVDQGRRFFKLMVDTYGFEPTIHHYGC 323

Query: 130 MVGLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIGN 5
           +V L+  AG  ++A E+++ + +  N++ WTSLLAAC++  N
Sbjct: 324 IVDLYAKAGKLEDAYEVIKTMRMEPNIIIWTSLLAACKKFKN 365


>tr|B8AAW0|B8AAW0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_04090 PE=4 SV=1
          Length = 419

 Score = 87.4 bits (215), Expect = 3e-16
 Identities = 42/102 (41%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
 Frame = -3

Query: 307 EHALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRER-RIAISIKYYNL 131
           E A++ F ++C SG+QP+++TF  +LSAC  AG VDQG   FKLM +      +I +Y  
Sbjct: 248 EKAIQLFEEMCRSGVQPNEMTFTAVLSACGQAGLVDQGRRFFKLMVDTYGFEPTIHHYGC 307

Query: 130 MVGLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIGN 5
           +V L+  AG  ++A E+++ + +  N++ WTSLLAAC++  N
Sbjct: 308 IVDLYAKAGKLEDAYEVIKTMRMEPNIIIWTSLLAACKKFKN 349


>tr|A7P600|A7P600_VITVI Chromosome chr4 scaffold_6, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00032728001
           PE=4 SV=1
          Length = 599

 Score = 87.4 bits (215), Expect = 3e-16
 Identities = 43/105 (40%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
 Frame = -3

Query: 313 QYEHALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRE-RRIAISIKYY 137
           Q E A+E FS++  SG +PD +TF+ +L AC+H+G V+ G  +F LM +  +I   +++Y
Sbjct: 389 QAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVEHY 448

Query: 136 NLMVGLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIGNV 2
             MV L   AG  QEA E+++ + +  NVV W +LL+AC   GN+
Sbjct: 449 GCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSACSIHGNI 493


>tr|A7QHK7|A7QHK7_VITVI Chromosome chr5 scaffold_98, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00038824001
           PE=4 SV=1
          Length = 677

 Score = 87.0 bits (214), Expect = 4e-16
 Identities = 42/104 (40%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
 Frame = -3

Query: 310 YEHALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMR-ERRIAISIKYYN 134
           ++ AL+CF  + S+G+ PD+V F+ +L+ACSH+G VDQG++ F+ MR +  I  ++K+Y 
Sbjct: 387 FDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYT 446

Query: 133 LMVGLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIGNV 2
           L+V L   AG   EA   ++ +PI  + V W +L  ACR   N+
Sbjct: 447 LIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNI 490


>tr|Q6YWP8|Q6YWP8_ORYSJ Os02g0730900 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0072H09.44 PE=4 SV=1
          Length = 488

 Score = 86.3 bits (212), Expect = 7e-16
 Identities = 42/102 (41%), Positives = 65/102 (63%)
 Frame = -3

Query: 307 EHALECFSDLCSSGLQPDDVTFMCLLSACSHAGQVDQGVHHFKLMRERRIAISIKYYNLM 128
           E AL  F+++   G++P+ VTF+ +L+ACSH G V++G  +F LMR   I  ++++Y  +
Sbjct: 281 EMALRLFTEMRQLGIEPNGVTFLAVLNACSHGGLVNEGFKYFNLMRSMGIKSTMQHYGCL 340

Query: 127 VGLFCHAGCFQEAEEMLECLPIMSNVVGWTSLLAACRRIGNV 2
           + L   AG  +EA E+   LP    +V W+SLLAAC+  GNV
Sbjct: 341 IDLLGRAGFLEEAFELASSLPEDPGLVIWSSLLAACQSHGNV 382