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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913248
Clone id YMU001_000028_B07
Library
Length 504
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000028_B07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTCTGATCAGTGCCCATGATAACTGATTTACAGCAGCAACCAGAAGCACACCGAGGCGAT
TATATTTGATTCTTCGCCTTGCACTATTTTTGAGCAAGGGCGTCTACAATCATGAATGTG
ACACTAAGTTTTGCCACACTGCAATCCCATCTTTGTAGGAGGCATTCGGACAACCTGATG
CTTATCTGCATGCAAACTGCCTCCAATTCCAACTCAAAAGTAATTTTCTTTGTTGCTGCT
TTTCCCCTCAAAACTTGGATTTGACTAAAAACAGGACAAAATTATATGATGGCATTATAT
AATTGCCTGCACCCCTAACTGCTGCATCTCCCTAAGTTGCCACTGGGGAAAAATCTCTCC
CTCTTCCATCTCTTCTGGAGAAACTTGTTGCATTGCCCAGGCATAATAGACGGTAAGGAT
GTCGTCCTTGGTTCCCTGTGTTATCTTACCATGTTTATCACGCACACAGAAGATCTGTTG
GGTTTGGAACGTAACAATGATGAT
■■Homology search results ■■ -
sp_hit_id Q3SZV0
Definition sp|Q3SZV0|TTC36_BOVIN Tetratricopeptide repeat protein 36 OS=Bos taurus
Align length 26
Score (bit) 30.8
E-value 3.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913248|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_B07.
         (504 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q3SZV0|TTC36_BOVIN Tetratricopeptide repeat protein 36 OS=Bos...    31   3.8  
sp|O35458|VIAAT_RAT Vesicular inhibitory amino acid transporter ...    30   4.9  
sp|O35633|VIAAT_MOUSE Vesicular inhibitory amino acid transporte...    30   4.9  
sp|Q95KE2|VIAAT_MACFA Vesicular inhibitory amino acid transporte...    30   4.9  
sp|Q9H598|VIAAT_HUMAN Vesicular inhibitory amino acid transporte...    30   4.9  
sp|Q6PF45|VIAAT_XENLA Vesicular inhibitory amino acid transporte...    30   6.5  

>sp|Q3SZV0|TTC36_BOVIN Tetratricopeptide repeat protein 36 OS=Bos
           taurus GN=TTC36 PE=2 SV=1
          Length = 188

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 12/26 (46%), Positives = 21/26 (80%)
 Frame = -1

Query: 375 EEMEEGEIFPQWQLREMQQLGVQAII 298
           +E++EGE+FP+ QL + + L +QA+I
Sbjct: 34  KEVDEGEVFPRAQLEQSKALELQAVI 59


>sp|O35458|VIAAT_RAT Vesicular inhibitory amino acid transporter
           OS=Rattus norvegicus GN=Slc32a1 PE=1 SV=1
          Length = 525

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +1

Query: 358 SLFHL--FWRNLLHCPGIIDGKDVVLGSLCYLTMFITHTEDLLGLERNN 498
           SLFHL   WR LL      D    V+G +C ++ F+   E L+   R N
Sbjct: 474 SLFHLRLLWRKLLWHQVFFDVAIFVIGGICSVSGFVHSLEGLIEAYRTN 522


>sp|O35633|VIAAT_MOUSE Vesicular inhibitory amino acid transporter
           OS=Mus musculus GN=Slc32a1 PE=1 SV=3
          Length = 525

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +1

Query: 358 SLFHL--FWRNLLHCPGIIDGKDVVLGSLCYLTMFITHTEDLLGLERNN 498
           SLFHL   WR LL      D    V+G +C ++ F+   E L+   R N
Sbjct: 474 SLFHLRLLWRKLLWHQVFFDVAIFVIGGICSVSGFVHSLEGLIEAYRTN 522


>sp|Q95KE2|VIAAT_MACFA Vesicular inhibitory amino acid transporter
           OS=Macaca fascicularis GN=SLC32A1 PE=2 SV=1
          Length = 525

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +1

Query: 358 SLFHL--FWRNLLHCPGIIDGKDVVLGSLCYLTMFITHTEDLLGLERNN 498
           SLFHL   WR LL      D    V+G +C ++ F+   E L+   R N
Sbjct: 474 SLFHLRLLWRKLLWHQVFFDVAIFVIGGICSVSGFVHSLEGLIEAYRTN 522


>sp|Q9H598|VIAAT_HUMAN Vesicular inhibitory amino acid transporter
           OS=Homo sapiens GN=SLC32A1 PE=1 SV=2
          Length = 525

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +1

Query: 358 SLFHL--FWRNLLHCPGIIDGKDVVLGSLCYLTMFITHTEDLLGLERNN 498
           SLFHL   WR LL      D    V+G +C ++ F+   E L+   R N
Sbjct: 474 SLFHLRLLWRKLLWHQVFFDVAIFVIGGICSVSGFVHSLEGLIEAYRTN 522


>sp|Q6PF45|VIAAT_XENLA Vesicular inhibitory amino acid transporter
           OS=Xenopus laevis GN=slc32a1 PE=2 SV=1
          Length = 518

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +1

Query: 358 SLFHL--FWRNLLHCPGIIDGKDVVLGSLCYLTMFITHTEDLL 480
           SLFHL   WR LL      D    V+GS+C ++ F+   E L+
Sbjct: 467 SLFHLKLMWRQLLWHQVFFDVSIFVIGSICSVSGFVHSLEGLI 509
tr_hit_id A7Q1T7
Definition tr|A7Q1T7|A7Q1T7_VITVI Chromosome chr7 scaffold_44, whole genome shotgun sequence OS=Vitis vinifera
Align length 57
Score (bit) 82.8
E-value 9.0e-15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913248|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_B07.
         (504 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7Q1T7|A7Q1T7_VITVI Chromosome chr7 scaffold_44, whole genome...    83   9e-15
tr|A9S8R1|A9S8R1_PHYPA Predicted protein OS=Physcomitrella paten...    81   3e-14
tr|A9TC25|A9TC25_PHYPA Predicted protein (Fragment) OS=Physcomit...    79   9e-14
tr|Q8S8E5|Q8S8E5_ARATH Putative uncharacterized protein At2g3607...    73   9e-12
tr|Q5XF06|Q5XF06_ARATH At2g36070 OS=Arabidopsis thaliana PE=2 SV=1     73   9e-12
tr|Q69V11|Q69V11_ORYSJ Os07g0409700 protein OS=Oryza sativa subs...    70   6e-11
tr|B8B5E7|B8B5E7_ORYSI Putative uncharacterized protein OS=Oryza...    70   6e-11
tr|A3BIW2|A3BIW2_ORYSJ Putative uncharacterized protein OS=Oryza...    70   6e-11
tr|B4FDK0|B4FDK0_MAIZE Putative uncharacterized protein OS=Zea m...    70   8e-11
tr|Q9SIL8|Q9SIL8_ARATH Putative mitochondrial inner membrane tra...    69   1e-10
tr|Q1PF33|Q1PF33_ARATH Mitochondrial import inner membrane trans...    69   1e-10
tr|Q00Z38|Q00Z38_OSTTA Mitochondrial import inner membrane trans...    53   7e-06
tr|A4S4J8|A4S4J8_OSTLU MPT family transporter: inner membrane tr...    53   1e-05
tr|A8J8N7|A8J8N7_CHLRE Mitochondrial inner membrane translocase ...    44   0.003
tr|Q8NVQ0|Q8NVQ0_STAAW Putative uncharacterized protein MW1902 O...    37   0.54 
tr|Q6G7X4|Q6G7X4_STAAS Hypothetical phage protein OS=Staphylococ...    37   0.54 
tr|Q9MBP8|Q9MBP8_9CAUD Orf 44a OS=Staphylococcus prophage phiPV8...    37   0.54 
tr|O80048|O80048_9CAUD Orf 9 OS=Staphylococcus phage PVL PE=4 SV=1     37   0.54 
tr|A7TWQ4|A7TWQ4_9VIRU Putative uncharacterized protein OS=Staph...    37   0.54 
tr|A0ZS44|A0ZS44_9CAUD DNA packaging protein OS=Staphylococcus p...    37   0.54 
tr|Q2FWT6|Q2FWT6_STAA8 Conserved hypothetical phage protein OS=S...    36   1.2  
tr|Q8SDK7|Q8SDK7_BPPHD DNA packaging protein OS=Staphylococcus p...    36   1.2  
tr|Q2HD56|Q2HD56_CHAGB Putative uncharacterized protein OS=Chaet...    35   2.1  
tr|B2AAI7|B2AAI7_PODAN Predicted CDS Pa_1_4140 OS=Podospora anse...    34   3.5  
tr|B4K5K9|B4K5K9_DROMO GI24055 OS=Drosophila mojavensis GN=GI240...    33   6.0  
tr|B4LWF9|B4LWF9_DROVI GJ23681 OS=Drosophila virilis GN=GJ23681 ...    33   7.8  

>tr|A7Q1T7|A7Q1T7_VITVI Chromosome chr7 scaffold_44, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00028592001
           PE=4 SV=1
          Length = 451

 Score = 82.8 bits (203), Expect = 9e-15
 Identities = 39/57 (68%), Positives = 44/57 (77%)
 Frame = -1

Query: 468 CVRDKHGKITQGTKDDILTVYYAWAMQQVSPEEMEEGEIFPQWQLREMQQLGVQAII 298
           CVR   G I +G KD I TVYYAWAMQQV  EE+ EG I+P W+LREMQQLGVQA+I
Sbjct: 395 CVRSADGSIKEGGKDTIHTVYYAWAMQQVDAEELGEGAIYPIWRLREMQQLGVQALI 451


>tr|A9S8R1|A9S8R1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_163495 PE=4 SV=1
          Length = 428

 Score = 80.9 bits (198), Expect = 3e-14
 Identities = 36/57 (63%), Positives = 43/57 (75%)
 Frame = -1

Query: 468 CVRDKHGKITQGTKDDILTVYYAWAMQQVSPEEMEEGEIFPQWQLREMQQLGVQAII 298
           C RDK G I +G +DDI TV+YAWAMQQ SPEE   GE   +W+LREMQQ G+QA+I
Sbjct: 372 CARDKAGNIIEGARDDIHTVFYAWAMQQESPEETSHGEFQTRWKLREMQQAGIQALI 428


>tr|A9TC25|A9TC25_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_143404 PE=4 SV=1
          Length = 354

 Score = 79.3 bits (194), Expect = 9e-14
 Identities = 35/57 (61%), Positives = 43/57 (75%)
 Frame = -1

Query: 468 CVRDKHGKITQGTKDDILTVYYAWAMQQVSPEEMEEGEIFPQWQLREMQQLGVQAII 298
           C R+K G I +G +DDI TV+YAWAMQQ SPEE   GE   +W+LREMQQ G+QA+I
Sbjct: 298 CARNKDGNIIEGARDDIHTVFYAWAMQQESPEETNRGEFHTRWKLREMQQAGMQALI 354


>tr|Q8S8E5|Q8S8E5_ARATH Putative uncharacterized protein At2g36070
           OS=Arabidopsis thaliana GN=At2g36070 PE=2 SV=1
          Length = 499

 Score = 72.8 bits (177), Expect = 9e-12
 Identities = 34/57 (59%), Positives = 42/57 (73%)
 Frame = -1

Query: 468 CVRDKHGKITQGTKDDILTVYYAWAMQQVSPEEMEEGEIFPQWQLREMQQLGVQAII 298
           CVRD+ GKI +G +D I TVYY WAMQQV   E+ E  I+P W+LREM + GVQA+I
Sbjct: 443 CVRDQDGKIKEGGQDTIHTVYYDWAMQQVDAAELGEDAIYPIWRLREMLRAGVQALI 499


>tr|Q5XF06|Q5XF06_ARATH At2g36070 OS=Arabidopsis thaliana PE=2 SV=1
          Length = 469

 Score = 72.8 bits (177), Expect = 9e-12
 Identities = 34/57 (59%), Positives = 42/57 (73%)
 Frame = -1

Query: 468 CVRDKHGKITQGTKDDILTVYYAWAMQQVSPEEMEEGEIFPQWQLREMQQLGVQAII 298
           CVRD+ GKI +G +D I TVYY WAMQQV   E+ E  I+P W+LREM + GVQA+I
Sbjct: 413 CVRDQDGKIKEGGQDTIHTVYYDWAMQQVDAAELGEDAIYPIWRLREMLRAGVQALI 469


>tr|Q69V11|Q69V11_ORYSJ Os07g0409700 protein OS=Oryza sativa subsp.
           japonica GN=P0492E07.122 PE=2 SV=1
          Length = 475

 Score = 70.1 bits (170), Expect = 6e-11
 Identities = 30/58 (51%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
 Frame = -1

Query: 468 CVRDKHGKITQGTKDDILTVYYAWAMQQVSPEEM-EEGEIFPQWQLREMQQLGVQAII 298
           CVRD+ G++T+G +D I TV+YAWAMQ +  +E+ EE   +P W+LRE+QQ+G++A+I
Sbjct: 418 CVRDREGQVTEGGQDTIQTVFYAWAMQLMDSDEVPEEESYYPVWRLREIQQVGIKALI 475


>tr|B8B5E7|B8B5E7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_25725 PE=4 SV=1
          Length = 475

 Score = 70.1 bits (170), Expect = 6e-11
 Identities = 30/58 (51%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
 Frame = -1

Query: 468 CVRDKHGKITQGTKDDILTVYYAWAMQQVSPEEM-EEGEIFPQWQLREMQQLGVQAII 298
           CVRD+ G++T+G +D I TV+YAWAMQ +  +E+ EE   +P W+LRE+QQ+G++A+I
Sbjct: 418 CVRDREGQVTEGGQDTIQTVFYAWAMQLMDSDEVPEEESYYPVWRLREIQQVGIKALI 475


>tr|A3BIW2|A3BIW2_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_022984 PE=4 SV=1
          Length = 417

 Score = 70.1 bits (170), Expect = 6e-11
 Identities = 30/58 (51%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
 Frame = -1

Query: 468 CVRDKHGKITQGTKDDILTVYYAWAMQQVSPEEM-EEGEIFPQWQLREMQQLGVQAII 298
           CVRD+ G++T+G +D I TV+YAWAMQ +  +E+ EE   +P W+LRE+QQ+G++A+I
Sbjct: 360 CVRDREGQVTEGGQDTIQTVFYAWAMQLMDSDEVPEEESYYPVWRLREIQQVGIKALI 417


>tr|B4FDK0|B4FDK0_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 474

 Score = 69.7 bits (169), Expect = 8e-11
 Identities = 30/58 (51%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
 Frame = -1

Query: 468 CVRDKHGKITQGTKDDILTVYYAWAMQQVSPEEM-EEGEIFPQWQLREMQQLGVQAII 298
           CVRD+ G++T+G +D I TV+Y+WAMQ +  +E+ EE   +P W+LREMQQ G++A+I
Sbjct: 417 CVRDREGQVTEGGQDTIQTVFYSWAMQLMDSDEVPEEESYYPVWRLREMQQAGIKALI 474


>tr|Q9SIL8|Q9SIL8_ARATH Putative mitochondrial inner membrane
           translocating protein OS=Arabidopsis thaliana
           GN=At2g20510 PE=2 SV=2
          Length = 472

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 32/57 (56%), Positives = 43/57 (75%)
 Frame = -1

Query: 468 CVRDKHGKITQGTKDDILTVYYAWAMQQVSPEEMEEGEIFPQWQLREMQQLGVQAII 298
           CVRD++G+I +G +D I TVY+ WAMQQV   E+ E  I+P W+LREM + GVQA+I
Sbjct: 416 CVRDENGEIQEGGQDTIHTVYHEWAMQQVETTELGEDAIYPIWRLREMCRNGVQALI 472