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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913250
Clone id YMU001_000028_B09
Library
Length 508
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000028_B09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TCACAATGGGAATATTAAAGTAGTGGTGAAACGACATTCCATAGACAACAAAGCCTTACT
CTGTCTCTGCTGTTTAAACAACAAAAGAAGTGTGTATGCTCTCTTCAGAGAATGTTAAAA
TGGACAATCCGCAAAATTCATGTGCTGCCAAGGGACAGTGCTCTTTCTCAAATACATGGC
TACATTGACTTGCATATGACTCAAGCTTCTGCACCCTCCATAGCAGTATCTGCAGTCTCC
TCTTGACCGTCCCCTTTCTTACCTTGCTTGTTCTTTCCTCCAACTTTTTTCTTTGCCTTC
GTTCCCAAGGCCAACCATGCCTTGATTTCAGGATCCTCAAGAGCTTTGCTGCAATTGATT
TCTTGTAGTGGATGGCCAGTTAACTTATCTGAGCCATTGGGCATCAGTAGCACGGTGAAT
CTTATATGAGCAACATAATCACCTGTAAGATATATAGTAAAAACTTCTTGTCAGTCCACT
TTGAATGGTAACAATAATCTCTTCCCGA
■■Homology search results ■■ -
sp_hit_id P50580
Definition sp|P50580|PA2G4_MOUSE Proliferation-associated protein 2G4 OS=Mus musculus
Align length 46
Score (bit) 38.5
E-value 0.018
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913250|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_B09.
         (508 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P50580|PA2G4_MOUSE Proliferation-associated protein 2G4 OS=Mu...    39   0.018
sp|Q9UQ80|PA2G4_HUMAN Proliferation-associated protein 2G4 OS=Ho...    39   0.018
sp|Q1ZXG4|PRLA_DICDI Proliferation-associated protein A OS=Dicty...    31   2.9  
sp|P55205|GUC2G_RAT Guanylate cyclase 2G OS=Rattus norvegicus GN...    31   2.9  

>sp|P50580|PA2G4_MOUSE Proliferation-associated protein 2G4 OS=Mus
           musculus GN=Pa2g4 PE=1 SV=3
          Length = 394

 Score = 38.5 bits (88), Expect = 0.018
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = -3

Query: 443 GDYVAHIRFTVLLMPNGSDKLTGHPLQE--INCSKALEDPEIKAWL 312
           G++VA  +FTVLLMPNG  ++T  P +         ++D E+KA L
Sbjct: 313 GEFVAQFKFTVLLMPNGPMRITSGPFEPDLYKSEMEVQDAELKALL 358


>sp|Q9UQ80|PA2G4_HUMAN Proliferation-associated protein 2G4 OS=Homo
           sapiens GN=PA2G4 PE=1 SV=3
          Length = 394

 Score = 38.5 bits (88), Expect = 0.018
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = -3

Query: 443 GDYVAHIRFTVLLMPNGSDKLTGHPLQE--INCSKALEDPEIKAWL 312
           G++VA  +FTVLLMPNG  ++T  P +         ++D E+KA L
Sbjct: 313 GEFVAQFKFTVLLMPNGPMRITSGPFEPDLYKSEMEVQDAELKALL 358


>sp|Q1ZXG4|PRLA_DICDI Proliferation-associated protein A
           OS=Dictyostelium discoideum GN=prlA PE=2 SV=1
          Length = 385

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -3

Query: 446 TGDYVAHIRFTVLLMPNGSDKLTG--HPLQEINCSKALEDPEIKAWLA 309
           +G  V   + TVL++PNG+ KL G   PL  +    ++ D  IKA +A
Sbjct: 315 SGCEVVQFKTTVLVLPNGNHKLIGTEFPLPFVRSEFSVTDDAIKALIA 362


>sp|P55205|GUC2G_RAT Guanylate cyclase 2G OS=Rattus norvegicus
           GN=Gucy2g PE=2 SV=2
          Length = 1100

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 18/59 (30%), Positives = 26/59 (44%)
 Frame = -1

Query: 313 WPWERRQRKKLEERTSKVRKGTVKRRLQILLWRVQKLESYASQCSHVFEKEHCPLAAHE 137
           W     QR         +R+ + + R+ IL   + KLE YAS    V E+  C L A +
Sbjct: 809 WAESPEQRPAFPSIKKTLREASPRGRVSILDSMMGKLEMYASHLEEVVEERTCQLVAEK 867
tr_hit_id A9NUM6
Definition tr|A9NUM6|A9NUM6_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 46
Score (bit) 82.4
E-value 1.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913250|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_B09.
         (508 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NUM6|A9NUM6_PICSI Putative uncharacterized protein OS=Picea...    82   1e-14
tr|B7FKM0|B7FKM0_MEDTR Putative uncharacterized protein OS=Medic...    79   9e-14
tr|A9PF64|A9PF64_POPTR Putative uncharacterized protein OS=Popul...    79   9e-14
tr|A0EVX1|A0EVX1_9FABA EBP1 OS=Ammopiptanthus mongolicus PE=2 SV=1     79   2e-13
tr|Q9LKG4|Q9LKG4_ATRHO Putative DNA binding protein OS=Atriplex ...    78   3e-13
tr|A7QHN5|A7QHN5_VITVI Chromosome chr8 scaffold_99, whole genome...    77   5e-13
tr|A9TMB0|A9TMB0_PHYPA Predicted protein OS=Physcomitrella paten...    76   1e-12
tr|A9SUB4|A9SUB4_PHYPA Predicted protein OS=Physcomitrella paten...    75   1e-12
tr|A7NYC6|A7NYC6_VITVI Chromosome chr6 scaffold_3, whole genome ...    75   2e-12
tr|A9SI08|A9SI08_PHYPA Predicted protein OS=Physcomitrella paten...    75   2e-12
tr|B6TBW4|B6TBW4_MAIZE Proliferation-associated protein 2G4 OS=Z...    73   7e-12
tr|Q3EAL7|Q3EAL7_ARATH Uncharacterized protein At3g51800.2 OS=Ar...    71   3e-11
tr|Q9C5I5|Q9C5I5_ARATH Putative nuclear DNA-binding protein G2p ...    69   2e-10
tr|Q96327|Q96327_ARATH G2p (Putative nuclear DNA-binding protein...    69   2e-10
tr|A0FH76|A0FH76_SOLTU EBP1 OS=Solanum tuberosum PE=2 SV=1             69   2e-10
tr|Q5W6H1|Q5W6H1_ORYSJ Os05g0350500 protein OS=Oryza sativa subs...    63   7e-09
tr|A3B2Z6|A3B2Z6_ORYSJ Putative uncharacterized protein OS=Oryza...    63   7e-09
tr|A2Y3I6|A2Y3I6_ORYSI Putative uncharacterized protein OS=Oryza...    63   7e-09
tr|O22523|O22523_ORYSA DNA-binding protein GBP16 OS=Oryza sativa...    60   5e-08
tr|B6KVV6|B6KVV6_TOXGO Proliferation-associated protein 2G4, put...    45   0.002
tr|A8JAW4|A8JAW4_CHLRE Predicted protein OS=Chlamydomonas reinha...    44   0.004
tr|Q4UGU5|Q4UGU5_THEAN Proliferation-associated protein 2g4, put...    43   0.008
tr|Q4N8V0|Q4N8V0_THEPA Proliferation-associated protein 2g4, put...    42   0.022
tr|Q7ZXR5|Q7ZXR5_XENLA Pa2g4 protein (Fragment) OS=Xenopus laevi...    40   0.064
tr|Q5U5C4|Q5U5C4_XENLA Pa2g4 protein OS=Xenopus laevis GN=Pa2g4 ...    40   0.064
tr|Q66KL8|Q66KL8_XENTR MGC79578 protein OS=Xenopus tropicalis GN...    39   0.11 
tr|Q28FX5|Q28FX5_XENTR Proliferation-associated 2G4 (Fragment) O...    39   0.11 
tr|Q6GNV0|Q6GNV0_XENLA MGC80858 protein OS=Xenopus laevis GN=pa2...    39   0.14 
tr|A9UWM2|A9UWM2_MONBE Predicted protein OS=Monosiga brevicollis...    39   0.14 
tr|A7SKM1|A7SKM1_NEMVE Predicted protein OS=Nematostella vectens...    39   0.14 

>tr|A9NUM6|A9NUM6_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 394

 Score = 82.4 bits (202), Expect = 1e-14
 Identities = 36/46 (78%), Positives = 43/46 (93%)
 Frame = -3

Query: 443 GDYVAHIRFTVLLMPNGSDKLTGHPLQEINCSKALEDPEIKAWLAL 306
           G+ VAHI+FTVLLMPNGSDK+TGHPLQE+N +KA++DPEIK WLAL
Sbjct: 310 GELVAHIKFTVLLMPNGSDKITGHPLQELNPTKAIDDPEIKTWLAL 355


>tr|B7FKM0|B7FKM0_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 394

 Score = 79.3 bits (194), Expect = 9e-14
 Identities = 34/46 (73%), Positives = 42/46 (91%)
 Frame = -3

Query: 443 GDYVAHIRFTVLLMPNGSDKLTGHPLQEINCSKALEDPEIKAWLAL 306
           GD+VAHI+FTVLLMPNGSD++T HPLQE+  +K ++DPEIKAWLAL
Sbjct: 309 GDFVAHIKFTVLLMPNGSDRVTSHPLQELQPTKTIDDPEIKAWLAL 354


>tr|A9PF64|A9PF64_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 396

 Score = 79.3 bits (194), Expect = 9e-14
 Identities = 35/46 (76%), Positives = 41/46 (89%)
 Frame = -3

Query: 443 GDYVAHIRFTVLLMPNGSDKLTGHPLQEINCSKALEDPEIKAWLAL 306
           GDYVAHI+FTVLLMPNGSD++T H LQE+  SK ++DPEIKAWLAL
Sbjct: 310 GDYVAHIKFTVLLMPNGSDRITSHSLQELQPSKTIDDPEIKAWLAL 355


>tr|A0EVX1|A0EVX1_9FABA EBP1 OS=Ammopiptanthus mongolicus PE=2 SV=1
          Length = 395

 Score = 78.6 bits (192), Expect = 2e-13
 Identities = 34/46 (73%), Positives = 42/46 (91%)
 Frame = -3

Query: 443 GDYVAHIRFTVLLMPNGSDKLTGHPLQEINCSKALEDPEIKAWLAL 306
           GDYVAHI+FTVLLMPNGSD++T +PLQE+  +K ++DPEIKAWLAL
Sbjct: 309 GDYVAHIKFTVLLMPNGSDRVTSYPLQELQPTKTIDDPEIKAWLAL 354


>tr|Q9LKG4|Q9LKG4_ATRHO Putative DNA binding protein OS=Atriplex
           hortensis PE=2 SV=1
          Length = 397

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 33/46 (71%), Positives = 43/46 (93%)
 Frame = -3

Query: 443 GDYVAHIRFTVLLMPNGSDKLTGHPLQEINCSKALEDPEIKAWLAL 306
           GDYVAHI+FTVLLMPNGSD++T +P+QE+  +K+++DPEIKAWLAL
Sbjct: 310 GDYVAHIKFTVLLMPNGSDRVTSYPVQELQPTKSIDDPEIKAWLAL 355


>tr|A7QHN5|A7QHN5_VITVI Chromosome chr8 scaffold_99, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00038856001
           PE=4 SV=1
          Length = 371

 Score = 77.0 bits (188), Expect = 5e-13
 Identities = 34/46 (73%), Positives = 40/46 (86%)
 Frame = -3

Query: 443 GDYVAHIRFTVLLMPNGSDKLTGHPLQEINCSKALEDPEIKAWLAL 306
           GDYVAHI+FTVLLMPNGSD++T H LQE+  +K  +DPEIKAWLAL
Sbjct: 309 GDYVAHIKFTVLLMPNGSDRITSHSLQELQPTKTTDDPEIKAWLAL 354


>tr|A9TMB0|A9TMB0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_170836 PE=4 SV=1
          Length = 399

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 36/46 (78%), Positives = 39/46 (84%)
 Frame = -3

Query: 443 GDYVAHIRFTVLLMPNGSDKLTGHPLQEINCSKALEDPEIKAWLAL 306
           GD VAHI+FTVLLMPNGSDK+TG PLQE   +K  EDPEIKAWLAL
Sbjct: 310 GDCVAHIKFTVLLMPNGSDKITGLPLQECQSTKVPEDPEIKAWLAL 355


>tr|A9SUB4|A9SUB4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_188484 PE=4 SV=1
          Length = 394

 Score = 75.5 bits (184), Expect = 1e-12
 Identities = 35/46 (76%), Positives = 40/46 (86%)
 Frame = -3

Query: 443 GDYVAHIRFTVLLMPNGSDKLTGHPLQEINCSKALEDPEIKAWLAL 306
           GD+VAHI+FTVLLMPNGSDK+TG PLQ +  +K  EDPEIKAWLAL
Sbjct: 310 GDFVAHIQFTVLLMPNGSDKITGLPLQALEPTKVPEDPEIKAWLAL 355


>tr|A7NYC6|A7NYC6_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024068001
           PE=4 SV=1
          Length = 391

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 34/47 (72%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
 Frame = -3

Query: 443 GDYVAHIRFTVLLMPNGSDKLTGHPLQEINCSKALE-DPEIKAWLAL 306
           GD+VAHI+FTVLLMPNGSD++T HPLQE+  +K ++ DPEIKAWLAL
Sbjct: 309 GDFVAHIKFTVLLMPNGSDRITSHPLQELRPTKTIDNDPEIKAWLAL 355


>tr|A9SI08|A9SI08_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_130161 PE=4 SV=1
          Length = 378

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 34/51 (66%), Positives = 42/51 (82%)
 Frame = -3

Query: 458 TIYLTGDYVAHIRFTVLLMPNGSDKLTGHPLQEINCSKALEDPEIKAWLAL 306
           ++ LTGD+VA I+FTVLLMPNGSDK+TG PLQE   +K  +DPEIKAWL +
Sbjct: 311 SLILTGDFVARIKFTVLLMPNGSDKITGVPLQEYQQTKVPDDPEIKAWLGM 361