BP913252 |
Clone id |
YMU001_000028_B11 |
Library |
YMU01 |
Length |
522 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000028_B11. |
Accession |
BP913252 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3157Contig1 |
Sequence |
ACACATGAGGCATGTGATTTCCCACCCAGTGGCATTCAATCGCCTCTTGTTCAAGAAGAA CTTCACTTAGTAGTTAATAGCAGTTCAAGTCCTCGGGTTGATTCTATGGTGAATTCCAAG CTTGAACATGGTCCAATTGGAAATGGTGCCACTAGGCATATTGCTCCTGACAGGGTGGCC CCATTGCTAAGTGTGGCTGGGGAGCAGACTGTTTTTGGCCTTACGGGTAGCTGTGGGACA ACAGGAGGTATAAAGCAGGAGGATGGTTCATCGATGAATAAATCTGAACAAGATACAGCT GCAGAATGGGTTGACCAGGATGAACTGGGGGTCTATGTTACCCTAGTAGTGCTTCCCAAT GGCAGCAGAGATTTGAGGAGAGTAAGATTCAGTAGAAGGCGATTTACTGAAAAACAGGCG GAGCTGTGGTGGACAGAAAATCGAGCAAGAGTGTTTGATAAATATAATGTGAAAAGTATG GACAAATCAACCATCTTTGAGGCCAGGACAGGAAGGGAATGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P46044 |
Definition |
sp|P46044|NIFB_FRAAL FeMo cofactor biosynthesis protein nifB OS=Frankia alni |
Align length |
87 |
Score (bit) |
35.0 |
E-value |
0.2 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PQZ5 |
Definition |
tr|A7PQZ5|A7PQZ5_VITVI Chromosome chr6 scaffold_25, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
78 |
Score (bit) |
81.3 |
E-value |
3.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913252|Adiantum capillus-veneris mRNA, clone: YMU001_000028_B11. (507 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PQZ5|A7PQZ5_VITVI Chromosome chr6 scaffold_25, whole genome... 81 3e-14 tr|B8A3R7|B8A3R7_MAIZE Putative uncharacterized protein OS=Zea m... 81 3e-14 tr|Q0DIJ3|Q0DIJ3_ORYSJ Os05g0384800 protein OS=Oryza sativa subs... 79 2e-13 tr|Q5JL00|Q5JL00_ORYSJ Putative ZR1 protein OS=Oryza sativa subs... 77 5e-13 tr|B8A981|B8A981_ORYSI Putative uncharacterized protein OS=Oryza... 77 5e-13 tr|A6N0M2|A6N0M2_ORYSI Zinc finger protein (Fragment) OS=Oryza s... 77 5e-13 tr|A3A1K7|A3A1K7_ORYSJ Putative uncharacterized protein OS=Oryza... 77 5e-13 tr|A6N0Y2|A6N0Y2_ORYSI Ran gtpase binding protein (Fragment) OS=... 77 6e-13 tr|A7Q5G8|A7Q5G8_VITVI Chromosome undetermined scaffold_53, whol... 75 2e-12 tr|B8AZS5|B8AZS5_ORYSI Putative uncharacterized protein OS=Oryza... 73 7e-12 tr|Q94CK7|Q94CK7_ARATH Putative uncharacterized protein At5g1235... 72 1e-11 tr|A7QMY2|A7QMY2_VITVI Chromosome undetermined scaffold_129, who... 72 1e-11 tr|A5BGE9|A5BGE9_VITVI Putative uncharacterized protein OS=Vitis... 72 1e-11 tr|Q947D2|Q947D2_ARATH Zinc finger protein OS=Arabidopsis thalia... 72 2e-11 tr|Q8W111|Q8W111_ARATH At1g76950/F22K20_5 OS=Arabidopsis thalian... 72 2e-11 tr|Q56WW7|Q56WW7_ARATH Zinc finger protein (Fragment) OS=Arabido... 72 2e-11 tr|O49281|O49281_ARATH F22K20.5 protein OS=Arabidopsis thaliana ... 72 2e-11 tr|Q9FHX1|Q9FHX1_ARATH TMV resistance protein-like OS=Arabidopsi... 71 3e-11 tr|Q3E9B7|Q3E9B7_ARATH Uncharacterized protein At5g19420.1 OS=Ar... 71 3e-11 tr|A9S6B1|A9S6B1_PHYPA Predicted protein OS=Physcomitrella paten... 67 4e-10 tr|A9SW15|A9SW15_PHYPA Predicted protein OS=Physcomitrella paten... 67 7e-10 tr|Q65XH7|Q65XH7_ORYSJ Os05g0106700 protein OS=Oryza sativa subs... 65 1e-09 tr|B8A9M0|B8A9M0_ORYSI Putative uncharacterized protein OS=Oryza... 65 1e-09 tr|A2XZH5|A2XZH5_ORYSI Putative uncharacterized protein OS=Oryza... 65 1e-09 tr|Q947C9|Q947C9_TRIMO Putative chromosome condensation factor O... 65 2e-09 tr|Q7XTM0|Q7XTM0_ORYSJ Os04g0686200 protein OS=Oryza sativa subs... 65 2e-09 tr|Q5EWZ0|Q5EWZ0_WHEAT Putative chromosome condensation factor O... 65 2e-09 tr|Q259N3|Q259N3_ORYSA H0723C07.10 protein OS=Oryza sativa GN=H0... 65 2e-09 tr|B8ART6|B8ART6_ORYSI Putative uncharacterized protein OS=Oryza... 65 2e-09 tr|A3AYU6|A3AYU6_ORYSJ Putative uncharacterized protein OS=Oryza... 65 2e-09
>tr|A7PQZ5|A7PQZ5_VITVI Chromosome chr6 scaffold_25, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022255001 PE=4 SV=1 Length = 1101
Score = 81.3 bits (199), Expect = 3e-14 Identities = 38/78 (48%), Positives = 49/78 (62%) Frame = +1
Query: 247 DGSSMNKSEQDTAAEWVDQDELGVYVTLVVLPNGSXXXXXXXXXXXXFTEKQAELWWTEN 426 +GS +SE EWV+QDE GVY+TL LP G F+EKQAE WW EN Sbjct: 1015 NGSRTKESEHRNDNEWVEQDEPGVYITLTSLPGGVKDLKRVRFSRKRFSEKQAEQWWAEN 1074
Query: 427 RARVFDKYNVKSMDKSTI 480 RARV ++YNV+ +DKS++ Sbjct: 1075 RARVHERYNVRMIDKSSV 1092
>tr|B8A3R7|B8A3R7_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 159
Score = 80.9 bits (198), Expect = 3e-14 Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 10/111 (9%) Frame = +1
Query: 175 SVAGEQTVFGLTGSCGTTGGIKQ----------EDGSSMNKSEQDTAAEWVDQDELGVYV 324 S +GEQ + G G + G ++GS +E AEWV+QDE GVY+ Sbjct: 39 SSSGEQIINGHNGLLASNGPSSVRNKTSHPEVGKNGSRPPDAESCHDAEWVEQDEPGVYI 98
Query: 325 TLVVLPNGSXXXXXXXXXXXXFTEKQAELWWTENRARVFDKYNVKSMDKST 477 TL LP G+ F+E QAE WW ENRARV+ +YNV+ +DKST Sbjct: 99 TLTALPGGARDLKRVRFSRKRFSETQAEQWWQENRARVYQQYNVRVVDKST 149
>tr|Q0DIJ3|Q0DIJ3_ORYSJ Os05g0384800 protein OS=Oryza sativa subsp. japonica GN=Os05g0384800 PE=4 SV=1 Length = 1086
Score = 78.6 bits (192), Expect = 2e-13 Identities = 35/77 (45%), Positives = 50/77 (64%) Frame = +1
Query: 244 EDGSSMNKSEQDTAAEWVDQDELGVYVTLVVLPNGSXXXXXXXXXXXXFTEKQAELWWTE 423 ++G+ + S+ +EWV+QDE GVY+TL LP G+ F+E QAE WW E Sbjct: 1000 KNGTRLPDSDSKHESEWVEQDEPGVYITLTALPGGTRDLKRVRFSRKRFSETQAEQWWQE 1059
Query: 424 NRARVFDKYNVKSMDKS 474 NRARV+++YNV+ +DKS Sbjct: 1060 NRARVYEQYNVRVVDKS 1076
>tr|Q5JL00|Q5JL00_ORYSJ Putative ZR1 protein OS=Oryza sativa subsp. japonica GN=P0431G06.5 PE=4 SV=1 Length = 1091
Score = 77.0 bits (188), Expect = 5e-13 Identities = 53/156 (33%), Positives = 74/156 (47%) Frame = +1
Query: 7 PPSGIQSPLVQEELHLVVNSSSSPRVDSMVNSKLEHGPIGNGATRHIAPDRVAPLLSVAG 186 P SG P+ E + S SP S V ++ +GP G A+ + R+ AG Sbjct: 949 PLSGF--PMPSELSSMATESLGSP---SSVGEQISNGPNGLLASNGPSSVRIK-----AG 998
Query: 187 EQTVFGLTGSCGTTGGIKQEDGSSMNKSEQDTAAEWVDQDELGVYVTLVVLPNGSXXXXX 366 V ++GS + ++E AEWV+QDE GVY+TL LP G+ Sbjct: 999 HPEV--------------GKNGSRLPEAESCHEAEWVEQDEPGVYITLTALPGGARDLKR 1044
Query: 367 XXXXXXXFTEKQAELWWTENRARVFDKYNVKSMDKS 474 F+E QAE WW ENR RV+ YNV+ ++KS Sbjct: 1045 VRFSRKRFSETQAEQWWQENRTRVYQHYNVRMVEKS 1080
>tr|B8A981|B8A981_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05225 PE=4 SV=1 Length = 1093
Score = 77.0 bits (188), Expect = 5e-13 Identities = 53/156 (33%), Positives = 74/156 (47%) Frame = +1
Query: 7 PPSGIQSPLVQEELHLVVNSSSSPRVDSMVNSKLEHGPIGNGATRHIAPDRVAPLLSVAG 186 P SG P+ E + S SP S V ++ +GP G A+ + R+ AG Sbjct: 951 PLSGF--PMPSELSSMATESLGSP---SSVGEQISNGPNGLLASNGPSSVRIK-----AG 1000
Query: 187 EQTVFGLTGSCGTTGGIKQEDGSSMNKSEQDTAAEWVDQDELGVYVTLVVLPNGSXXXXX 366 V ++GS + ++E AEWV+QDE GVY+TL LP G+ Sbjct: 1001 HPEV--------------GKNGSRLPEAESCHEAEWVEQDEPGVYITLTALPGGARDLKR 1046
Query: 367 XXXXXXXFTEKQAELWWTENRARVFDKYNVKSMDKS 474 F+E QAE WW ENR RV+ YNV+ ++KS Sbjct: 1047 VRFSRKRFSETQAEQWWQENRTRVYQHYNVRMVEKS 1082
>tr|A6N0M2|A6N0M2_ORYSI Zinc finger protein (Fragment) OS=Oryza sativa subsp. indica PE=2 SV=1 Length = 171
Score = 77.0 bits (188), Expect = 5e-13 Identities = 53/156 (33%), Positives = 74/156 (47%) Frame = +1
Query: 7 PPSGIQSPLVQEELHLVVNSSSSPRVDSMVNSKLEHGPIGNGATRHIAPDRVAPLLSVAG 186 P SG P+ E + S SP S V ++ +GP G A+ + R+ AG Sbjct: 29 PLSGF--PMPSELSSMATESLGSP---SSVGEQISNGPNGLLASNGPSSVRIK-----AG 78
Query: 187 EQTVFGLTGSCGTTGGIKQEDGSSMNKSEQDTAAEWVDQDELGVYVTLVVLPNGSXXXXX 366 V ++GS + ++E AEWV+QDE GVY+TL LP G+ Sbjct: 79 HPEV--------------GKNGSRLPEAESCHEAEWVEQDEPGVYITLTALPGGARDLKR 124
Query: 367 XXXXXXXFTEKQAELWWTENRARVFDKYNVKSMDKS 474 F+E QAE WW ENR RV+ YNV+ ++KS Sbjct: 125 VRFSRKRFSETQAEQWWQENRTRVYQHYNVRMVEKS 160
>tr|A3A1K7|A3A1K7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_004679 PE=4 SV=1 Length = 1086
Score = 77.0 bits (188), Expect = 5e-13 Identities = 53/156 (33%), Positives = 74/156 (47%) Frame = +1
Query: 7 PPSGIQSPLVQEELHLVVNSSSSPRVDSMVNSKLEHGPIGNGATRHIAPDRVAPLLSVAG 186 P SG P+ E + S SP S V ++ +GP G A+ + R+ AG Sbjct: 944 PLSGF--PMPSELSSMATESLGSP---SSVGEQISNGPNGLLASNGPSSVRIK-----AG 993
Query: 187 EQTVFGLTGSCGTTGGIKQEDGSSMNKSEQDTAAEWVDQDELGVYVTLVVLPNGSXXXXX 366 V ++GS + ++E AEWV+QDE GVY+TL LP G+ Sbjct: 994 HPEV--------------GKNGSRLPEAESCHEAEWVEQDEPGVYITLTALPGGARDLKR 1039
Query: 367 XXXXXXXFTEKQAELWWTENRARVFDKYNVKSMDKS 474 F+E QAE WW ENR RV+ YNV+ ++KS Sbjct: 1040 VRFSRKRFSETQAEQWWQENRTRVYQHYNVRMVEKS 1075
>tr|A6N0Y2|A6N0Y2_ORYSI Ran gtpase binding protein (Fragment) OS=Oryza sativa subsp. indica PE=2 SV=1 Length = 100
Score = 76.6 bits (187), Expect = 6e-13 Identities = 35/77 (45%), Positives = 48/77 (62%) Frame = +1
Query: 244 EDGSSMNKSEQDTAAEWVDQDELGVYVTLVVLPNGSXXXXXXXXXXXXFTEKQAELWWTE 423 ++GS + ++E AEWV+QDE GVY+TL LP G+ F+E QAE WW E Sbjct: 13 KNGSRLPEAESCHEAEWVEQDEPGVYITLTALPGGARDLKRVRFSRKRFSETQAEQWWQE 72
Query: 424 NRARVFDKYNVKSMDKS 474 NR RV+ YNV+ ++KS Sbjct: 73 NRTRVYQHYNVRMVEKS 89
>tr|A7Q5G8|A7Q5G8_VITVI Chromosome undetermined scaffold_53, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030935001 PE=4 SV=1 Length = 1124
Score = 75.1 bits (183), Expect = 2e-12 Identities = 39/83 (46%), Positives = 47/83 (56%), Gaps = 4/83 (4%) Frame = +1
Query: 262 NKSEQDT----AAEWVDQDELGVYVTLVVLPNGSXXXXXXXXXXXXFTEKQAELWWTENR 429 NK++ D EWV+QDE GVY+TLV LP G F+EKQAE WW NR Sbjct: 1039 NKNKTDAEPYQGVEWVEQDEPGVYITLVSLPGGVKDLKRVRFSRKRFSEKQAEQWWAANR 1098
Query: 430 ARVFDKYNVKSMDKSTIFEARTG 498 RV+ +YNV +DKS I R G Sbjct: 1099 VRVYQQYNVPLVDKSCIGIGREG 1121
>tr|B8AZS5|B8AZS5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20559 PE=4 SV=1 Length = 1131
Score = 73.2 bits (178), Expect = 7e-12 Identities = 33/75 (44%), Positives = 45/75 (60%) Frame = +1
Query: 250 GSSMNKSEQDTAAEWVDQDELGVYVTLVVLPNGSXXXXXXXXXXXXFTEKQAELWWTENR 429 GS + ++E AEWV++DE GVY+TL LP G+ F E QA+ WW ENR Sbjct: 987 GSRLPEAESCHEAEWVEEDEPGVYITLTTLPGGARDIKRVWFSRRRFNEAQADQWWLENR 1046
Query: 430 ARVFDKYNVKSMDKS 474 RV+ YNV+ ++KS Sbjct: 1047 TRVYQHYNVRMVEKS 1061
Score = 36.6 bits (83), Expect = 0.72 Identities = 16/35 (45%), Positives = 22/35 (62%) Frame = +1
Query: 247 DGSSMNKSEQDTAAEWVDQDELGVYVTLVVLPNGS 351 D + ++E AEWV+QD GVY+TL LP G+ Sbjct: 1066 DNEILPEAESCHEAEWVEQDIPGVYITLTTLPGGA 1100
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