BP913258 |
Clone id |
YMU001_000028_C06 |
Library |
YMU01 |
Length |
424 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000028_C06. |
Accession |
BP913258 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TGTTAGCATCAAATGCCACAACTTGGAGCAAAAAAAGGACTACAAGATTTGGAGAATGAA GTTGTTCATGGAATGGACAAGAGACATGAAAGAGTTGTGGTACCTTAATAATGATAGATG TCATCAAGGATGCCTATGTAGAAGCTGGTTTGGTATCAGAAAAGGACGAAAAACAAGAAC TAAAACTGCATGCAACTCTAATGAACAGTAGCCACCGTAAAAGGAAACGAGGAAAAACAT TTGCCAGGCGGACGCCTTTTGATGCAAGGCCCATCCTTTCGGTGCATGGGTCAGATGAGT GGGGAGAATACACCATAACAGAGGCTCATTTGTCAGAGAGGTTTGTGTATGATGAAGATG GATACTATCATTGCTGTGGTTCTGTCAAGTTCCCTCCCTCAGCCTTGTTGATATGGGTAT CGTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9D8Z1 |
Definition |
sp|Q9D8Z1|ASCC1_MOUSE Activating signal cointegrator 1 complex subunit 1 OS=Mus musculus |
Align length |
106 |
Score (bit) |
50.4 |
E-value |
3.0e-06 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7P776 |
Definition |
tr|A7P776|A7P776_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
97 |
Score (bit) |
125.0 |
E-value |
8.0e-28 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913258|Adiantum capillus-veneris mRNA, clone: YMU001_000028_C06. (409 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7P776|A7P776_VITVI Chromosome chr9 scaffold_7, whole genome ... 125 8e-28 tr|A5BMM2|A5BMM2_VITVI Putative uncharacterized protein OS=Vitis... 124 3e-27 tr|Q9LU22|Q9LU22_ARATH Arabidopsis thaliana genomic DNA, chromos... 117 2e-25 tr|B8AB11|B8AB11_ORYSI Putative uncharacterized protein OS=Oryza... 109 6e-23 tr|A2ZQZ9|A2ZQZ9_ORYSJ Putative uncharacterized protein OS=Oryza... 108 1e-22 tr|Q5NB67|Q5NB67_ORYSJ Putative uncharacterized protein P0431F01... 108 2e-22 tr|B7ELY0|B7ELY0_ORYSJ cDNA clone:J033025F17, full insert sequen... 108 2e-22 tr|A9SR53|A9SR53_PHYPA Predicted protein OS=Physcomitrella paten... 102 1e-20 tr|Q9LU23|Q9LU23_ARATH Arabidopsis thaliana genomic DNA, chromos... 89 8e-17 tr|Q6NKQ6|Q6NKQ6_ARATH At3g16220 OS=Arabidopsis thaliana GN=At3g... 89 8e-17 tr|Q5NB68|Q5NB68_ORYSJ cDNA clone:001-108-H04, full insert seque... 85 2e-15 tr|A7T2D7|A7T2D7_NEMVE Predicted protein OS=Nematostella vectens... 64 3e-09 tr|B6LU29|B6LU29_BRAFL Putative uncharacterized protein OS=Branc... 57 6e-07 tr|Q4RE78|Q4RE78_TETNG Chromosome 2 SCAF15135, whole genome shot... 54 3e-06 tr|Q7QJL7|Q7QJL7_ANOGA AGAP007571-PB OS=Anopheles gambiae GN=AGA... 54 3e-06 tr|A7UR96|A7UR96_ANOGA AGAP007571-PA OS=Anopheles gambiae GN=AGA... 54 3e-06 tr|A4II84|A4II84_XENTR LOC100124965 protein OS=Xenopus tropicali... 54 5e-06 tr|B7Z518|B7Z518_HUMAN cDNA FLJ55237, highly similar to Homo sap... 52 1e-05 tr|Q0IIJ9|Q0IIJ9_BOVIN Activating signal cointegrator 1 complex ... 52 1e-05 tr|Q566X5|Q566X5_DANRE Zgc:112403 OS=Danio rerio GN=zgc:112403 P... 51 3e-05 tr|B0WJL3|B0WJL3_CULQU Putative uncharacterized protein OS=Culex... 50 7e-05 tr|Q16TM3|Q16TM3_AEDAE Putative uncharacterized protein OS=Aedes... 49 1e-04 tr|Q16R79|Q16R79_AEDAE Putative uncharacterized protein OS=Aedes... 49 1e-04 tr|B4K0Q9|B4K0Q9_DROGR GH25238 OS=Drosophila grimshawi GN=GH2523... 47 5e-04 tr|B4J5A0|B4J5A0_DROGR GH20290 OS=Drosophila grimshawi GN=GH2029... 46 0.001 tr|B4K493|B4K493_DROGR GH17982 (Fragment) OS=Drosophila grimshaw... 45 0.001 tr|A8PDQ6|A8PDQ6_BRUMA KH domain containing protein OS=Brugia ma... 45 0.001 tr|Q290T8|Q290T8_DROPS GA11423 OS=Drosophila pseudoobscura pseud... 45 0.002 tr|B4KU56|B4KU56_DROMO GI19460 OS=Drosophila mojavensis GN=GI194... 44 0.003 tr|B4GB95|B4GB95_DROPE GL11512 OS=Drosophila persimilis GN=GL115... 44 0.004
>tr|A7P776|A7P776_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034352001 PE=4 SV=1 Length = 425
Score = 125 bits (315), Expect = 8e-28 Identities = 60/97 (61%), Positives = 73/97 (75%) Frame = +3
Query: 105 LIMIDVIKDAYVEAGLVSEKDEKQELKLHATLMNSSHRKRKRGKTFARRTPFDARPILSV 284 L+ VI DAYVEAGLV +KD Q+LKLHAT+MN+ HRKRK K + FDAR I Sbjct: 325 LLACQVIIDAYVEAGLVLDKDRGQKLKLHATVMNARHRKRK--KKTRKSDSFDARGIFKQ 382
Query: 285 HGSDEWGEYTITEAHLSERFVYDEDGYYHCCGSVKFP 395 +GS+EWG+Y I EAHLS+RFV+DE+GYYHCC S+ FP Sbjct: 383 YGSEEWGDYIIREAHLSQRFVFDENGYYHCCASIPFP 419
>tr|A5BMM2|A5BMM2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011439 PE=4 SV=1 Length = 137
Score = 124 bits (310), Expect = 3e-27 Identities = 58/94 (61%), Positives = 72/94 (76%) Frame = +3
Query: 114 IDVIKDAYVEAGLVSEKDEKQELKLHATLMNSSHRKRKRGKTFARRTPFDARPILSVHGS 293 ++ I DAYVEAGLV +KD Q+LKLHAT+MN+ HRKRK K + FDAR I +GS Sbjct: 40 LEXIIDAYVEAGLVLDKDRGQKLKLHATVMNARHRKRK--KKTRKSDSFDARGIFKQYGS 97
Query: 294 DEWGEYTITEAHLSERFVYDEDGYYHCCGSVKFP 395 +EWG+Y I EAHLS+RFV+DE+GYYHCC S+ FP Sbjct: 98 EEWGDYIIREAHLSQRFVFDENGYYHCCASIPFP 131
>tr|Q9LU22|Q9LU22_ARATH Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MYA6 OS=Arabidopsis thaliana PE=4 SV=1 Length = 419
Score = 117 bits (294), Expect = 2e-25 Identities = 54/92 (58%), Positives = 69/92 (75%) Frame = +3
Query: 120 VIKDAYVEAGLVSEKDEKQELKLHATLMNSSHRKRKRGKTFARRTPFDARPILSVHGSDE 299 +I DA+V+AGLV EKD KQ LKLH T+MN+ HRKR++ T FDAR I G+++ Sbjct: 324 IITDAFVKAGLVLEKDAKQSLKLHVTVMNARHRKRRKNNKKKMET-FDAREIHKQFGNED 382
Query: 300 WGEYTITEAHLSERFVYDEDGYYHCCGSVKFP 395 WGEY I EAHLS+RFV+D++GYY CCGS+ FP Sbjct: 383 WGEYLIQEAHLSQRFVFDQNGYYRCCGSIPFP 414
>tr|B8AB11|B8AB11_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_01023 PE=4 SV=1 Length = 692
Score = 109 bits (273), Expect = 6e-23 Identities = 52/96 (54%), Positives = 66/96 (68%) Frame = +3
Query: 120 VIKDAYVEAGLVSEKDEKQELKLHATLMNSSHRKRKRGKTFARRTPFDARPILSVHGSDE 299 VI DA+V++GLV E+D +QELKLHAT+MN HRK KR R FDAR I +G + Sbjct: 596 VITDAFVKSGLVLERDARQELKLHATIMNVRHRKSKRWNQ--RNDSFDARNIFRKYGEHD 653
Query: 300 WGEYTITEAHLSERFVYDEDGYYHCCGSVKFPPSAL 407 WGEY I E HLS+RF +DE GYY+CC S+ P + + Sbjct: 654 WGEYLIPEIHLSQRFKFDERGYYYCCSSIPLPAAEM 689
Score = 65.1 bits (157), Expect = 2e-09 Identities = 34/75 (45%), Positives = 42/75 (56%) Frame = +3
Query: 117 DVIKDAYVEAGLVSEKDEKQELKLHATLMNSSHRKRKRGKTFARRTPFDARPILSVHGSD 296 D+I DA+ + L DEK+ELKLHAT+MN+ RK FDAR I + Sbjct: 128 DIIIDAFTSSNLAPTSDEKRELKLHATVMNARFRKS------CPDASFDARKIFEKYAEH 181
Query: 297 EWGEYTITEAHLSER 341 EWGEY I E HL +R Sbjct: 182 EWGEYLIPEIHLCQR 196
>tr|A2ZQZ9|A2ZQZ9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_000971 PE=4 SV=1 Length = 799
Score = 108 bits (271), Expect = 1e-22 Identities = 51/97 (52%), Positives = 66/97 (68%) Frame = +3
Query: 117 DVIKDAYVEAGLVSEKDEKQELKLHATLMNSSHRKRKRGKTFARRTPFDARPILSVHGSD 296 +VI DA+V++GLV E+D +QELKLH T+MN HRK KR R FDAR I +G Sbjct: 702 EVITDAFVKSGLVLERDARQELKLHVTIMNVRHRKSKRWNQ--RNDSFDARNIFRKYGEH 759
Query: 297 EWGEYTITEAHLSERFVYDEDGYYHCCGSVKFPPSAL 407 +WGEY I E HLS+RF +DE GYY+CC S+ P + + Sbjct: 760 DWGEYLIPEIHLSQRFKFDERGYYYCCSSIPLPAAEM 796
Score = 57.4 bits (137), Expect = 4e-07 Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 6/92 (6%) Frame = +3
Query: 105 LIMIDVIKDAYVEAGLVSEKDEKQELKLHATLMNSSHRKRKRGKTFARRTPFDARPILSV 284 L++ +I + + L DEK+ELKLHAT+MN+ R K + FDAR I Sbjct: 223 LVVEALINHVFNISNLAPTSDEKRELKLHATVMNARFR-----KGYCPDASFDARKIFEK 277
Query: 285 HGSDEWGEYTITEAHL--SERF----VYDEDG 362 + EWGEY I E HL + RF + D++G Sbjct: 278 YAEHEWGEYLIPEIHLCQTRRFSPTSIIDDEG 309
>tr|Q5NB67|Q5NB67_ORYSJ Putative uncharacterized protein P0431F01.23 (Os01g0231900 protein) OS=Oryza sativa subsp. japonica GN=P0431F01.23 PE=4 SV=1 Length = 487
Score = 108 bits (269), Expect = 2e-22 Identities = 51/96 (53%), Positives = 65/96 (67%) Frame = +3
Query: 120 VIKDAYVEAGLVSEKDEKQELKLHATLMNSSHRKRKRGKTFARRTPFDARPILSVHGSDE 299 VI DA+V++GLV E+D +QELKLH T+MN HRK KR R FDAR I +G + Sbjct: 391 VITDAFVKSGLVLERDARQELKLHVTIMNVRHRKSKRWNQ--RNDSFDARNIFRKYGEHD 448
Query: 300 WGEYTITEAHLSERFVYDEDGYYHCCGSVKFPPSAL 407 WGEY I E HLS+RF +DE GYY+CC S+ P + + Sbjct: 449 WGEYLIPEIHLSQRFKFDERGYYYCCSSIPLPAAEM 484
>tr|B7ELY0|B7ELY0_ORYSJ cDNA clone:J033025F17, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 336
Score = 108 bits (269), Expect = 2e-22 Identities = 51/96 (53%), Positives = 65/96 (67%) Frame = +3
Query: 120 VIKDAYVEAGLVSEKDEKQELKLHATLMNSSHRKRKRGKTFARRTPFDARPILSVHGSDE 299 VI DA+V++GLV E+D +QELKLH T+MN HRK KR R FDAR I +G + Sbjct: 240 VITDAFVKSGLVLERDARQELKLHVTIMNVRHRKSKRWNQ--RNDSFDARNIFRKYGEHD 297
Query: 300 WGEYTITEAHLSERFVYDEDGYYHCCGSVKFPPSAL 407 WGEY I E HLS+RF +DE GYY+CC S+ P + + Sbjct: 298 WGEYLIPEIHLSQRFKFDERGYYYCCSSIPLPAAEM 333
>tr|A9SR53|A9SR53_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_187500 PE=4 SV=1 Length = 247
Score = 102 bits (254), Expect = 1e-20 Identities = 48/92 (52%), Positives = 64/92 (69%) Frame = +3
Query: 120 VIKDAYVEAGLVSEKDEKQELKLHATLMNSSHRKRKRGKTFARRTPFDARPILSVHGSDE 299 VI +A+ EAGLV +KD+ Q LKLHATLMN++ +R + +R PFDA I+ + + Sbjct: 149 VITEAFTEAGLVMDKDQTQTLKLHATLMNTT----QRAGGYKKRIPFDATEIMEKYKEHQ 204
Query: 300 WGEYTITEAHLSERFVYDEDGYYHCCGSVKFP 395 WGEY I+E HLS+RFVYD +GYY C S+ FP Sbjct: 205 WGEYHISEVHLSQRFVYDTNGYYRSCNSIPFP 236
>tr|Q9LU23|Q9LU23_ARATH Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MYA6 OS=Arabidopsis thaliana PE=4 SV=1 Length = 256
Score = 89.4 bits (220), Expect = 8e-17 Identities = 46/92 (50%), Positives = 57/92 (61%) Frame = +3
Query: 120 VIKDAYVEAGLVSEKDEKQELKLHATLMNSSHRKRKRGKTFARRTPFDARPILSVHGSDE 299 VI DA+ G KD K LKLHATLMN+S+RK K K FDAR I + + Sbjct: 168 VIIDAFENVGFAG-KDAKSRLKLHATLMNASYRKDKSKKM----DTFDAREIHKEFENKD 222
Query: 300 WGEYTITEAHLSERFVYDEDGYYHCCGSVKFP 395 WG Y I EAH+S+R+ YD +GY+HCC S+ FP Sbjct: 223 WGTYLIREAHISQRYKYDPNGYFHCCASLPFP 254
>tr|Q6NKQ6|Q6NKQ6_ARATH At3g16220 OS=Arabidopsis thaliana GN=At3g16220 PE=2 SV=1 Length = 257
Score = 89.4 bits (220), Expect = 8e-17 Identities = 46/92 (50%), Positives = 57/92 (61%) Frame = +3
Query: 120 VIKDAYVEAGLVSEKDEKQELKLHATLMNSSHRKRKRGKTFARRTPFDARPILSVHGSDE 299 VI DA+ G KD K LKLHATLMN+S+RK K K FDAR I + + Sbjct: 169 VIIDAFENVGFAG-KDAKSRLKLHATLMNASYRKDKSKKM----DTFDAREIHKEFENKD 223
Query: 300 WGEYTITEAHLSERFVYDEDGYYHCCGSVKFP 395 WG Y I EAH+S+R+ YD +GY+HCC S+ FP Sbjct: 224 WGTYLIREAHISQRYKYDPNGYFHCCASLPFP 255
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