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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913261
Clone id YMU001_000028_C09
Library
Length 562
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000028_C09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AGTTGGCAAAGGAGAGATGATTAATAATCGAATTGCTCAAAGGCTTACCTTTTTGTTTCT
TTGATAATGGGAACTTCATATATTAACTGGCAGCTTATTGAGAACACTGTGAACATTGCT
TCTTGGAATAATCCTTTTCGGCGTGCTTGGCCAGATGTCTATTTGAGCACAGATGAGCGT
GCTCTTGGTGGAGATCGTATGGAGTACGCATTTGCAAAACTTTGGTCCAGCTTATCTGGT
GGGAACAGAATTTCTCATCCCACCTAAGGTAAACCTGAGGGAATTGCAGATGTGCTTAAG
GGTGATTGGATCCTTACCAACAAAGACTCAGAACAATCAAATATTGTTCTTTGCATGTAT
AAGATTAACTGCGAGAACATAGGGTATTCAAAGGACTTCCTTCTAACACAGACAGTCAAC
TTTACAGTAGTATCTGGGACGGAGCTGGACCCAGAGGTTTAATTAATGACTATGGATCTA
TTTGTTGCTCGGACTATGACGACAAAAGCCTCTCTAGAGTTAGGTGGAGCCTTGAGTCTC
CGAGTACCTGCAGGTAATATCT
■■Homology search results ■■ -
sp_hit_id Q9SP32
Definition sp|Q9SP32|DICER_ARATH Endoribonuclease Dicer homolog OS=Arabidopsis thaliana
Align length 110
Score (bit) 85.1
E-value 2.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913261|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_C09.
         (562 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9SP32|DICER_ARATH Endoribonuclease Dicer homolog OS=Arabidop...    85   2e-16
sp|A0N0X6|LRRN1_BOVIN Leucine-rich repeat neuronal protein 1 OS=...    32   2.8  
sp|Q38960|LWD2_ARATH WD repeat-containing protein LWD2 OS=Arabid...    30   8.1  

>sp|Q9SP32|DICER_ARATH Endoribonuclease Dicer homolog OS=Arabidopsis
            thaliana GN=CAF PE=1 SV=2
          Length = 1909

 Score = 85.1 bits (209), Expect = 2e-16
 Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 7/110 (6%)
 Frame = +1

Query: 37   SKAYLFVSLIMGTSY-----INWQLIENTVNIASWNNPFRRAWPDVYLSTDERALGGDRM 201
            +KAYLFV +   TS      INW+L+E      +W+NP +RA PDVYL T+ER LGGDR 
Sbjct: 1082 AKAYLFVPVTDNTSMEPIKGINWELVEKITKTTAWDNPLQRARPDVYLGTNERTLGGDRR 1141

Query: 202  EYAFAKLWSSLSGGNRISHPT*GKPEGIA--DVLKGDWILTNKDSEQSNI 345
            EY F KL  ++  G + SHPT G    +A  DV++   +L  +D+ +  +
Sbjct: 1142 EYGFGKLRHNIVFGQK-SHPTYGIRGAVASFDVVRASGLLPVRDAFEKEV 1190



 Score = 84.3 bits (207), Expect = 4e-16
 Identities = 43/91 (47%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
 Frame = +1

Query: 274  PEGIADVLKGDWILTNKDSEQSNIV--LCMYKINCENIGYSKDFLLTQTVNFTVVSGTEL 447
            PEG+ADVLKG+W+ + K+  +S+ +  L MY + C + G SKD  L++   F ++ G EL
Sbjct: 958  PEGVADVLKGEWVSSGKEVCESSKLFHLYMYNVRCVDFGSSKDPFLSEVSEFAILFGNEL 1017

Query: 448  DPEV*LMTMDLFVARTMTTKASLELGGALSL 540
            D EV  M+MDL+VAR M TKASL   G+L +
Sbjct: 1018 DAEVLSMSMDLYVARAMITKASLAFKGSLDI 1048


>sp|A0N0X6|LRRN1_BOVIN Leucine-rich repeat neuronal protein 1 OS=Bos
           taurus GN=LRRN1 PE=3 SV=1
          Length = 716

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 23/76 (30%), Positives = 36/76 (47%)
 Frame = -3

Query: 518 SREAFVVIVRATNRSIVIN*TSGSSSVPDTTVKLTVCVRRKSFEYPMFSQLILYMQRTIF 339
           +R +FV+       S+++   +GSS       +L VC  R     P F+    Y + T  
Sbjct: 2   ARMSFVLAAYQMVLSLLMTSLTGSSLQSSECPQLCVCEIR-----PWFTPQSTYREATTV 56

Query: 338 DCSESLLVRIQSPLST 291
           DC++  L RI S LS+
Sbjct: 57  DCNDLRLTRIPSNLSS 72


>sp|Q38960|LWD2_ARATH WD repeat-containing protein LWD2
           OS=Arabidopsis thaliana GN=LWD2 PE=2 SV=1
          Length = 346

 Score = 30.0 bits (66), Expect = 8.1
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +3

Query: 411 DSQLYSSIWDGAGPRGLINDYGSICCSDYDDKSLSRVRWSLESPST 548
           D ++Y   W G G    +++ GS+   D  DK  S + +    PST
Sbjct: 178 DKEVYDIAWGGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPST 223
tr_hit_id A9RV91
Definition tr|A9RV91|A9RV91_PHYPA DsRNA-specific nuclease dicer and related ribonuclease OS=Physcomitrella patens subsp. patens
Align length 92
Score (bit) 105.0
E-value 1.0e-21
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913261|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_C09.
         (562 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RV91|A9RV91_PHYPA DsRNA-specific nuclease dicer and related...   105   1e-21
tr|B3SRP9|B3SRP9_PHYPA Dicer-like 1 OS=Physcomitrella patens GN=...   104   3e-21
tr|Q2HTA7|Q2HTA7_MEDTR Helicase, C-terminal; Argonaute and Dicer...   100   7e-20
tr|A2XBW0|A2XBW0_ORYSI Putative uncharacterized protein OS=Oryza...   100   9e-20
tr|Q8LMR2|Q8LMR2_ORYSJ Os03g0121800 protein OS=Oryza sativa subs...    99   2e-19
tr|A3ADL0|A3ADL0_ORYSJ Putative uncharacterized protein OS=Oryza...    99   2e-19
tr|A7PXV4|A7PXV4_VITVI Chromosome chr15 scaffold_37, whole genom...    90   1e-16
tr|A7IYQ4|A7IYQ4_PHYPA Dicer-like 1b protein OS=Physcomitrella p...    80   1e-13
tr|A9S9V6|A9S9V6_PHYPA DsRNA-specific nuclease dicer and related...    77   8e-13
tr|B2CU70|B2CU70_ARATH DCL1 (Fragment) OS=Arabidopsis thaliana G...    62   2e-08

>tr|A9RV91|A9RV91_PHYPA DsRNA-specific nuclease dicer and related
           ribonuclease OS=Physcomitrella patens subsp. patens
           GN=PpDCL1a PE=4 SV=1
          Length = 1662

 Score =  105 bits (263), Expect = 1e-21
 Identities = 53/92 (57%), Positives = 69/92 (75%), Gaps = 3/92 (3%)
 Frame = +1

Query: 274 PEGIADVLKGDWILTNKDSEQ---SNIVLCMYKINCENIGYSKDFLLTQTVNFTVVSGTE 444
           PEGIAD+LKGDWIL +KD +    SN+++ +Y + CEN+G+SKD LLT+T +F ++ G +
Sbjct: 702 PEGIADILKGDWILADKDPDAKPGSNVLVYVYMVKCENVGFSKDNLLTETSDFVILVGQK 761

Query: 445 LDPEV*LMTMDLFVARTMTTKASLELGGALSL 540
           L  EV  MTMDLFVARTM T+ASLE  G L L
Sbjct: 762 LQDEVLDMTMDLFVARTMITRASLEFCGNLDL 793



 Score = 86.3 bits (212), Expect = 1e-15
 Identities = 48/111 (43%), Positives = 66/111 (59%), Gaps = 7/111 (6%)
 Frame = +1

Query: 37   SKAYLFVSLIMGTS-----YINWQLIENTVNIASWNNPFRRAWPDVYLSTDERALGGDRM 201
            +KAYLF  +           ++W L+  T+   SW+NP +RA PDVYL TDERALGGDR 
Sbjct: 827  AKAYLFAPVAHKVDSDPLEMVDWGLVRKTIETDSWSNPLQRARPDVYLGTDERALGGDRR 886

Query: 202  EYAFAKLWSSLSGGNRISHPT*GKPEGIA--DVLKGDWILTNKDSEQSNIV 348
            EY F KL   L+ G R +HPT G    +A  DV+K   +L+++D  +  +V
Sbjct: 887  EYGFGKLRCGLAFGQR-AHPTYGIRGAVAQFDVVKATGLLSSQDIVEKTVV 936


>tr|B3SRP9|B3SRP9_PHYPA Dicer-like 1 OS=Physcomitrella patens
           GN=DCL1a PE=2 SV=1
          Length = 1662

 Score =  104 bits (260), Expect = 3e-21
 Identities = 52/92 (56%), Positives = 69/92 (75%), Gaps = 3/92 (3%)
 Frame = +1

Query: 274 PEGIADVLKGDWILTNKDSEQ---SNIVLCMYKINCENIGYSKDFLLTQTVNFTVVSGTE 444
           PEGIAD+LKGDWIL +KD +    SN+++ +Y + CEN+G+SKD LLT+T +F ++ G +
Sbjct: 702 PEGIADILKGDWILADKDPDAKPGSNVLVYVYMVKCENVGFSKDNLLTETSDFVILVGQK 761

Query: 445 LDPEV*LMTMDLFVARTMTTKASLELGGALSL 540
           L  +V  MTMDLFVARTM T+ASLE  G L L
Sbjct: 762 LQDQVLDMTMDLFVARTMITRASLEFCGNLDL 793



 Score = 86.3 bits (212), Expect = 1e-15
 Identities = 48/111 (43%), Positives = 66/111 (59%), Gaps = 7/111 (6%)
 Frame = +1

Query: 37   SKAYLFVSLIMGTS-----YINWQLIENTVNIASWNNPFRRAWPDVYLSTDERALGGDRM 201
            +KAYLF  +           ++W L+  T+   SW+NP +RA PDVYL TDERALGGDR 
Sbjct: 827  AKAYLFAPVAHKVDSDPLEMVDWGLVRKTIETDSWSNPLQRARPDVYLGTDERALGGDRR 886

Query: 202  EYAFAKLWSSLSGGNRISHPT*GKPEGIA--DVLKGDWILTNKDSEQSNIV 348
            EY F KL   L+ G R +HPT G    +A  DV+K   +L+++D  +  +V
Sbjct: 887  EYGFGKLRCGLAFGQR-AHPTYGIRGAVAQFDVVKATGLLSSQDIVEKTVV 936


>tr|Q2HTA7|Q2HTA7_MEDTR Helicase, C-terminal; Argonaute and Dicer
            protein, PAZ; Ribonuclease III, bacterial OS=Medicago
            truncatula GN=MtrDRAFT_AC150443g32v2 PE=4 SV=1
          Length = 1939

 Score =  100 bits (248), Expect = 7e-20
 Identities = 50/83 (60%), Positives = 65/83 (78%), Gaps = 2/83 (2%)
 Frame = +1

Query: 274  PEGIADVLKGDWILTNKDSEQSN--IVLCMYKINCENIGYSKDFLLTQTVNFTVVSGTEL 447
            PEG+AD+LKG+WIL+ KD+  ++  + L MY I CEN+G+SKD  LTQ  +F V+ GTEL
Sbjct: 931  PEGVADILKGEWILSGKDACNNSKLLHLYMYTIKCENVGHSKDPFLTQVSDFAVLFGTEL 990

Query: 448  DPEV*LMTMDLFVARTMTTKASL 516
            D EV  M+MDLF+ART+TTKASL
Sbjct: 991  DAEVLSMSMDLFIARTVTTKASL 1013



 Score = 86.3 bits (212), Expect = 1e-15
 Identities = 47/108 (43%), Positives = 66/108 (61%), Gaps = 7/108 (6%)
 Frame = +1

Query: 37   SKAYLFVSLIMGTS-----YINWQLIENTVNIASWNNPFRRAWPDVYLSTDERALGGDRM 201
            +KAYLFV ++   S      I+W L+E  +   +W NP ++A PDVYL T+ER LGGDR 
Sbjct: 1055 AKAYLFVPMVGDKSSDPMNQIDWHLVETIIGADAWKNPLQKARPDVYLGTNERTLGGDRR 1114

Query: 202  EYAFAKLWSSLSGGNRISHPT*GKPEGIA--DVLKGDWILTNKDSEQS 339
            EY F KL   L+ G + SHPT G    +A  DV+K   ++ N+DS ++
Sbjct: 1115 EYGFGKLRHGLAFGQK-SHPTYGIRGAVAQFDVVKASGLVPNRDSMET 1161


>tr|A2XBW0|A2XBW0_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_09779 PE=4 SV=1
          Length = 1883

 Score = 99.8 bits (247), Expect = 9e-20
 Identities = 49/91 (53%), Positives = 64/91 (70%), Gaps = 2/91 (2%)
 Frame = +1

Query: 274  PEGIADVLKGDWILTNKDSEQSN--IVLCMYKINCENIGYSKDFLLTQTVNFTVVSGTEL 447
            PEG+AD+L+G+WIL+ +D  Q++  I L MY +NC N+G SKD  +TQ  NF ++ G EL
Sbjct: 934  PEGVADILRGEWILSGRDGYQNSQFIKLYMYSVNCVNVGTSKDSFVTQLSNFAIIFGNEL 993

Query: 448  DPEV*LMTMDLFVARTMTTKASLELGGALSL 540
            D EV   TMDLFVARTM TKASL   G + +
Sbjct: 994  DAEVLSTTMDLFVARTMITKASLVFRGRIEI 1024



 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 7/104 (6%)
 Frame = +1

Query: 37   SKAYLFVSL-----IMGTSYINWQLIENTVNIASWNNPFRRAWPDVYLSTDERALGGDRM 201
            +KAYLFV +           I+W L+   VN  +WNNP +RA PDVYL T+ER LGGDR 
Sbjct: 1058 AKAYLFVPVGAEKCTDPLREIDWTLVNYIVNTDAWNNPLQRARPDVYLGTNERTLGGDRR 1117

Query: 202  EYAFAKLWSSLSGGNRISHPT*GKPEGIA--DVLKGDWILTNKD 327
            EY F KL    + G + +HPT G    IA  D++K   ++  +D
Sbjct: 1118 EYGFGKLRHGTAFGQK-AHPTYGIRGAIAEFDIVKASGLVPARD 1160


>tr|Q8LMR2|Q8LMR2_ORYSJ Os03g0121800 protein OS=Oryza sativa subsp.
            japonica GN=OJ1705B08.11 PE=4 SV=1
          Length = 1883

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 49/91 (53%), Positives = 64/91 (70%), Gaps = 2/91 (2%)
 Frame = +1

Query: 274  PEGIADVLKGDWILTNKDSEQSN--IVLCMYKINCENIGYSKDFLLTQTVNFTVVSGTEL 447
            PEG+AD+L+G+WIL+ +D  Q++  I L MY +NC N+G SKD  +TQ  NF ++ G EL
Sbjct: 934  PEGVADILRGEWILSGRDGYQNSQFIKLYMYSVNCVNVGTSKDPFVTQLSNFAIIFGNEL 993

Query: 448  DPEV*LMTMDLFVARTMTTKASLELGGALSL 540
            D EV   TMDLFVARTM TKASL   G + +
Sbjct: 994  DAEVLSTTMDLFVARTMITKASLVFRGRIEI 1024



 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 46/104 (44%), Positives = 61/104 (58%), Gaps = 7/104 (6%)
 Frame = +1

Query: 37   SKAYLFVSL-----IMGTSYINWQLIENTVNIASWNNPFRRAWPDVYLSTDERALGGDRM 201
            +KAYLFV +           I+W L+ N VN  +WNNP +RA PDVYL T+ER LGGDR 
Sbjct: 1058 AKAYLFVPVGAEKCTDPLREIDWTLVNNIVNTDAWNNPLQRARPDVYLGTNERTLGGDRR 1117

Query: 202  EYAFAKLWSSLSGGNRISHPT*GKPEGIA--DVLKGDWILTNKD 327
            EY F KL    + G + +HPT G    IA  D++K   ++  +D
Sbjct: 1118 EYGFGKLRHGTAFGQK-AHPTYGIRGAIAEFDIVKASGLVPARD 1160


>tr|A3ADL0|A3ADL0_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_008882 PE=4 SV=1
          Length = 1883

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 49/91 (53%), Positives = 64/91 (70%), Gaps = 2/91 (2%)
 Frame = +1

Query: 274  PEGIADVLKGDWILTNKDSEQSN--IVLCMYKINCENIGYSKDFLLTQTVNFTVVSGTEL 447
            PEG+AD+L+G+WIL+ +D  Q++  I L MY +NC N+G SKD  +TQ  NF ++ G EL
Sbjct: 934  PEGVADILRGEWILSGRDGYQNSQFIKLYMYSVNCVNVGTSKDPFVTQLSNFAIIFGNEL 993

Query: 448  DPEV*LMTMDLFVARTMTTKASLELGGALSL 540
            D EV   TMDLFVARTM TKASL   G + +
Sbjct: 994  DAEVLSTTMDLFVARTMITKASLVFRGRIEI 1024



 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 46/104 (44%), Positives = 61/104 (58%), Gaps = 7/104 (6%)
 Frame = +1

Query: 37   SKAYLFVSL-----IMGTSYINWQLIENTVNIASWNNPFRRAWPDVYLSTDERALGGDRM 201
            +KAYLFV +           I+W L+ N VN  +WNNP +RA PDVYL T+ER LGGDR 
Sbjct: 1058 AKAYLFVPVGAEKCTDPLREIDWTLVNNIVNTDAWNNPLQRARPDVYLGTNERTLGGDRR 1117

Query: 202  EYAFAKLWSSLSGGNRISHPT*GKPEGIA--DVLKGDWILTNKD 327
            EY F KL    + G + +HPT G    IA  D++K   ++  +D
Sbjct: 1118 EYGFGKLRHGTAFGQK-AHPTYGIRGAIAEFDIVKASGLVPARD 1160


>tr|A7PXV4|A7PXV4_VITVI Chromosome chr15 scaffold_37, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00026189001
            PE=4 SV=1
          Length = 1961

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 47/91 (51%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
 Frame = +1

Query: 274  PEGIADVLKGDWILTNKDSEQSN--IVLCMYKINCENIGYSKDFLLTQTVNFTVVSGTEL 447
            PEG+A+VL+G+WIL  KD   S+  + L MY + C N G SKD  LTQ  +F V+ G EL
Sbjct: 1015 PEGVANVLQGEWILLGKDGCNSSRLVHLYMYAVKCVNFGSSKDPFLTQVSDFVVLFGNEL 1074

Query: 448  DPEV*LMTMDLFVARTMTTKASLELGGALSL 540
            D EV  ++MDLF+ARTM TKASL   G + +
Sbjct: 1075 DAEVLSISMDLFIARTMVTKASLVFWGPIDI 1105



 Score = 81.3 bits (199), Expect = 3e-14
 Identities = 43/105 (40%), Positives = 64/105 (60%), Gaps = 7/105 (6%)
 Frame = +1

Query: 37   SKAYLFVSLIMGTS-----YINWQLIENTVNIASWNNPFRRAWPDVYLSTDERALGGDRM 201
            +KAYLFV ++   S      I+W ++E  +    W+NP +RA PDVYL T+ER LGGDR 
Sbjct: 1139 AKAYLFVPVVGDKSEDPIRQIDWDIVERIIRTDGWSNPLQRARPDVYLGTNERTLGGDRR 1198

Query: 202  EYAFAKLWSSLSGGNRISHPT*GKPEGIA--DVLKGDWILTNKDS 330
            EY F KL   ++ G + SHPT G    +A  DV++   ++ N+++
Sbjct: 1199 EYGFGKLRHGMAFGQK-SHPTYGIRGAVAQYDVVRASGLVPNRET 1242


>tr|A7IYQ4|A7IYQ4_PHYPA Dicer-like 1b protein OS=Physcomitrella
           patens GN=DCL1b PE=2 SV=1
          Length = 1695

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 39/75 (52%), Positives = 56/75 (74%), Gaps = 3/75 (4%)
 Frame = +1

Query: 274 PEGIADVLKGDWILTNKDS---EQSNIVLCMYKINCENIGYSKDFLLTQTVNFTVVSGTE 444
           PEGIAD+LKGD I+  KDS   E S +++ MY + CEN+G+S+D LLT+T +FT++ G +
Sbjct: 732 PEGIADILKGDRIVAEKDSDTKEGSKVLVFMYTVKCENVGFSRDSLLTETSDFTLLVGQQ 791

Query: 445 LDPEV*LMTMDLFVA 489
           L  +V  MT++LFVA
Sbjct: 792 LHDQVLTMTINLFVA 806



 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
 Frame = +1

Query: 37   SKAYLFVSLIMGTS-----YINWQLIENTVNIASWNNPFRRAWPDVYLSTDERALGGDRM 201
            +KAYLF  ++   +      ++W ++  T+   SW+NP +RA PDV L TDERALGGDR 
Sbjct: 857  AKAYLFAPVLHKDASDPKDLVDWVVMRRTIETDSWSNPLQRASPDVNLGTDERALGGDRR 916

Query: 202  EYAFAKLWSSLSGGNRISHPT*GKPEGIA--DVLKGDWILTNKDSEQSNIV 348
            EY F KL  SL+ G   +HPT G     A  DV+K   +L   D  +   V
Sbjct: 917  EYGFGKLRCSLAFGQG-AHPTYGARGAKAQFDVVKATGLLPTSDMVEETTV 966


>tr|A9S9V6|A9S9V6_PHYPA DsRNA-specific nuclease dicer and related
           ribonuclease OS=Physcomitrella patens subsp. patens
           GN=PpDCL1b PE=4 SV=1
          Length = 961

 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
 Frame = +1

Query: 37  SKAYLFVSLIMGTS-----YINWQLIENTVNIASWNNPFRRAWPDVYLSTDERALGGDRM 201
           +KAYLF  ++   +      ++W ++  T+   SW+NP +RA PDV L TDERALGGDR 
Sbjct: 361 AKAYLFAPVLHKDASDPKDLVDWVVMRRTIETDSWSNPLQRASPDVNLGTDERALGGDRR 420

Query: 202 EYAFAKLWSSLSGGNRISHPT*GKPEGIA--DVLKGDWILTNKDSEQSNIV 348
           EY F KL  SL+ G   +HPT G     A  DV+K   +L   D  +   V
Sbjct: 421 EYGFGKLRCSLAFGQG-AHPTYGARGAKAQFDVVKATGLLPTSDMVEETTV 470



 Score = 48.1 bits (113), Expect = 3e-04
 Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
 Frame = +1

Query: 274 PEGIADVLKGDWILTNKDSEQSNIVLCMYKINCENIGYSKDFLLTQTVNFTVVSGTEL-- 447
           PEGIAD+LKGD I+  KDS+         KI+  N       L+T +     +       
Sbjct: 239 PEGIADILKGDRIVAEKDSDTKE----GSKISLPN----PTLLITMSWKKRDLDAIRRFR 290

Query: 448 ------DPEV*LMTMDLFVARTMTTKASLELGGALSL 540
                 + +V  MT++LFVARTMTT+ASL+  G L+L
Sbjct: 291 KRHCCSNSQVLTMTINLFVARTMTTRASLKFFGDLNL 327


>tr|B2CU70|B2CU70_ARATH DCL1 (Fragment) OS=Arabidopsis thaliana
           GN=DCL1 PE=4 SV=1
          Length = 96

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 31/64 (48%), Positives = 41/64 (64%)
 Frame = +1

Query: 349 LCMYKINCENIGYSKDFLLTQTVNFTVVSGTELDPEV*LMTMDLFVARTMTTKASLELGG 528
           L MY + C + G SKD  L++   F ++ G ELD EV  M+MDL+VAR M TKASL   G
Sbjct: 13  LYMYNVRCVDFGSSKDPFLSEVSEFAILFGNELDAEVLSMSMDLYVARAMITKASLAFKG 72

Query: 529 ALSL 540
           +L +
Sbjct: 73  SLDI 76