BP913269 |
Clone id |
YMU001_000028_D07 |
Library |
YMU01 |
Length |
414 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000028_D07. |
Accession |
BP913269 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AAAATACTTGCTTGACTATCTTTTGCTTTCCAGAGTACTTTGGCTGAAATATCTTTTCTT TTCTGGGTGTCTCCTTATAGGTTTCAGCTAGGTCAGCAATTGACAAGAAGTTTTGAAAGC CTGTCTTGCTTGAAGAAGCTAATCCATGAGGGTTCTTTGATGTAGAGGCATATGATGTTA CACCTTCTTTGCTAATCGCTGGAAGTTCCAATTTAGCTTTATCCTTGTCTACAAGATTTG TCTTTGATTCTTGTGACTTTAGCAAATCTGAATCTAGCATTAACTATACCTGTAAATGTT GTTCGCTACCTCTTGAACAAGAGAGTATTAGCCTTGTATCTTCTTTGCTGGCCTTGTGTT GGTCTAACCACTGATGTCCAAGGATGACATCTGTATGCATGTCCTTTGAAGACT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P25033 |
Definition |
sp|P25033|HEMO_HYACE Hemolin OS=Hyalophora cecropia |
Align length |
104 |
Score (bit) |
34.3 |
E-value |
0.2 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B1HRK6 |
Definition |
tr|B1HRK6|B1HRK6_LYSSC Putative uncharacterized protein OS=Lysinibacillus sphaericus (strain C3-41) |
Align length |
132 |
Score (bit) |
37.7 |
E-value |
0.29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913269|Adiantum capillus-veneris mRNA, clone: YMU001_000028_D07. (414 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B1HRK6|B1HRK6_LYSSC Putative uncharacterized protein OS=Lysin... 38 0.29 tr|Q233K1|Q233K1_TETTH Putative uncharacterized protein OS=Tetra... 37 0.64 tr|Q4XXC3|Q4XXC3_PLACH Ubiquitin carboxyl-terminal hydrolase, pu... 37 0.64 tr|Q4H1G8|Q4H1G8_SAMCR Hemolin OS=Samia cynthia ricini PE=2 SV=1 37 0.64 tr|A4KW82|A4KW82_PLACH Ubiquitin carboxyl-terminal hydrolase OS=... 37 0.64 tr|A3I5P6|A3I5P6_9BACI Putative uncharacterized protein OS=Bacil... 36 0.84 tr|A5K3R5|A5K3R5_PLAVI Putative uncharacterized protein OS=Plasm... 35 1.4 tr|Q9SUP7|Q9SUP7_ARATH 98b like protein OS=Arabidopsis thaliana ... 35 1.9 tr|B2WS76|B2WS76_ARAHA High mobility group HMG1/2 family protein... 35 2.4 tr|B8F2H1|B8F2H1_BORGA Antigen, S1 OS=Borrelia garinii Far04 GN=... 34 3.2 tr|B8F1I1|B8F1I1_BORGA Antigen, S1 OS=Borrelia garinii PBr GN=BG... 34 3.2 tr|Q26438|Q26438_HYACE Hemolin OS=Hyalophora cecropia GN=hemolin... 34 3.2 tr|Q2H3H0|Q2H3H0_CHAGB Predicted protein OS=Chaetomium globosum ... 34 4.2 tr|A3GHW2|A3GHW2_PICST Zf-C2H2 Zinc finger, C2H2 type OS=Pichia ... 34 4.2 tr|A5Y2I2|A5Y2I2_9CARY NADH dehydrogenase subunit F (Fragment) O... 33 7.1 tr|A5Y2H4|A5Y2H4_9CARY NADH dehydrogenase subunit F (Fragment) O... 33 7.1 tr|A5Y2H0|A5Y2H0_9CARY NADH dehydrogenase subunit F (Fragment) O... 33 7.1 tr|A5Y2G3|A5Y2G3_9CARY NADH dehydrogenase subunit F (Fragment) O... 33 7.1
>tr|B1HRK6|B1HRK6_LYSSC Putative uncharacterized protein OS=Lysinibacillus sphaericus (strain C3-41) GN=Bsph_1695 PE=4 SV=1 Length = 212
Score = 37.7 bits (86), Expect = 0.29 Identities = 29/132 (21%), Positives = 64/132 (48%) Frame = -3
Query: 406 KDMHTDVILGHQWLDQHKASKEDTRLILSCSRGSEQHLQV*LMLDSDLLKSQESKTNLVD 227 K+ + + +Q++ + + E+T +L ++ L+ ++DLL +ES+ L Sbjct: 22 KEQKNPIAMLNQYIREAEKQTEETGKLLERQGQLKEKLEQEYQQNADLLAKRESQLTLA- 80
Query: 226 KDKAKLELPAISKEGVTSYASTSKNPHGLASSSKTGFQNFLSIADLAETYKETPRKEKIF 47 K + +L + + VT+Y T++N H L +S + + + + ET K + K+ Sbjct: 81 KTSGEQDLIDFAMDEVTAY--TARN-HTLQASIEASTREYFELERKFETMKHKIKDMKVR 137
Query: 46 QPKYSGKQKIVK 11 Q + GK+ + + Sbjct: 138 QLQLMGKENVTR 149
>tr|Q233K1|Q233K1_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210 GN=TTHERM_00391490 PE=4 SV=1 Length = 458
Score = 36.6 bits (83), Expect = 0.64 Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 1/92 (1%) Frame = -1
Query: 321 LVQEVANNIYRYS*C*IQIC*SHKNQRQIL*TR-IKLNWNFQRLAKKV*HHMPLHQRTLM 145 L++E+ NNIYR+ + C KNQ QI+ + +K+N++ ++ K + + + H Sbjct: 238 LIEEILNNIYRFG---VDRCKIQKNQNQIIMSETLKINFSERKTLKTITYSILHHSLCKQ 294
Query: 144 D*LLQARQAFKTSCQLLT*LKPIRRHPEKKRY 49 D R +K L + P R+ +++ Y Sbjct: 295 DQKFAKRYIYK----FLAHINPYRKENQQENY 322
>tr|Q4XXC3|Q4XXC3_PLACH Ubiquitin carboxyl-terminal hydrolase, putative (Fragment) OS=Plasmodium chabaudi GN=PC001064.02.0 PE=4 SV=1 Length = 1824
Score = 36.6 bits (83), Expect = 0.64 Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 1/87 (1%) Frame = -3
Query: 265 LLKSQESKTNLVD-KDKAKLELPAISKEGVTSYASTSKNPHGLASSSKTGFQNFLSIADL 89 ++K+Q SKT ++ KD+ + ++ + TS ++ S P G +++ + ++S Sbjct: 344 MMKTQFSKTGIIQTKDEFDNIIENVNNQSDTSLSTNSSVPSGCTTTTLDNYIKYISKKQK 403
Query: 88 AETYKETPRKEKIFQPKYSGKQKIVKQ 8 ET K + + +I K + K+K +K+ Sbjct: 404 FETEKRSSKSNRIKHKKTTKKKKKIKK 430
>tr|Q4H1G8|Q4H1G8_SAMCR Hemolin OS=Samia cynthia ricini PE=2 SV=1 Length = 413
Score = 36.6 bits (83), Expect = 0.64 Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 3/104 (2%) Frame = -3
Query: 346 KEDTRLILSCS-RGSEQHLQV*LMLDSDLLKSQESKTNLVDKDKAKLEL--PAISKEGVT 176 KE+ +L C G++Q ++ D QE L KD+ L P S EG Sbjct: 37 KENNPTVLECLIEGNDQGVKYSWQKDGKSFNWQEHNAAL-RKDEGSLVFLRPQASDEG-- 93
Query: 175 SYASTSKNPHGLASSSKTGFQNFLSIADLAETYKETPRKEKIFQ 44 Y ++ P G+ASS F+ IA A+T+++TP + + FQ Sbjct: 94 QYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQ 137
>tr|A4KW82|A4KW82_PLACH Ubiquitin carboxyl-terminal hydrolase OS=Plasmodium chabaudi GN=ubp-2 PE=3 SV=1 Length = 2722
Score = 36.6 bits (83), Expect = 0.64 Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 1/87 (1%) Frame = -3
Query: 265 LLKSQESKTNLVD-KDKAKLELPAISKEGVTSYASTSKNPHGLASSSKTGFQNFLSIADL 89 ++K+Q SKT ++ KD+ + ++ + TS ++ S P G +++ + ++S Sbjct: 1240 MMKTQFSKTGIIQTKDEFDNIIENVNNQSDTSLSTNSSVPSGCTTTTLDNYIKYISKKQK 1299
Query: 88 AETYKETPRKEKIFQPKYSGKQKIVKQ 8 ET K + + +I K + K+K +K+ Sbjct: 1300 FETEKRSSKSNRIKHKKTTKKKKKIKK 1326
>tr|A3I5P6|A3I5P6_9BACI Putative uncharacterized protein OS=Bacillus sp. B14905 GN=BB14905_02730 PE=4 SV=1 Length = 214
Score = 36.2 bits (82), Expect = 0.84 Identities = 28/132 (21%), Positives = 64/132 (48%) Frame = -3
Query: 406 KDMHTDVILGHQWLDQHKASKEDTRLILSCSRGSEQHLQV*LMLDSDLLKSQESKTNLVD 227 K+ + + +Q++ + + E+T +L ++ L+ ++DLL +ES+ L Sbjct: 24 KEQKNPIAMLNQYIREAEKQTEETGKLLERQGQLKEKLEQEYQQNADLLAKRESQLTLA- 82
Query: 226 KDKAKLELPAISKEGVTSYASTSKNPHGLASSSKTGFQNFLSIADLAETYKETPRKEKIF 47 + + +L + + VT+Y T++N H L +S + + + + ET K + K+ Sbjct: 83 QTSGEQDLIDFATDEVTAY--TARN-HTLQASIEASTREYFELERKFETMKHKIKDMKVR 139
Query: 46 QPKYSGKQKIVK 11 Q + GK+ + + Sbjct: 140 QLQLMGKENVTR 151
>tr|A5K3R5|A5K3R5_PLAVI Putative uncharacterized protein OS=Plasmodium vivax GN=PVX_118020 PE=4 SV=1 Length = 1372
Score = 35.4 bits (80), Expect = 1.4 Identities = 20/65 (30%), Positives = 33/65 (50%) Frame = -3
Query: 202 PAISKEGVTSYASTSKNPHGLASSSKTGFQNFLSIADLAETYKETPRKEKIFQPKYSGKQ 23 P +S T ST+ N + + SSS ++N D A T K P E++ + +++GK Sbjct: 236 PQLSTNSYTYKNSTNINGYTIISSSAVNYENSFLGDDEASTQKGGPPNERVKKKRFTGKN 295
Query: 22 KIVKQ 8 K K+ Sbjct: 296 KESKK 300
>tr|Q9SUP7|Q9SUP7_ARATH 98b like protein OS=Arabidopsis thaliana GN=F9D16.270 PE=2 SV=1 Length = 456
Score = 35.0 bits (79), Expect = 1.9 Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 6/122 (4%) Frame = -3
Query: 373 QWLDQHKASKEDTRLILSCSRGSEQHLQV*LMLDSDLLKSQESKTNLVDKDKAKLEL--- 203 Q ++++K +KE+ L S + E+ L++ +LK +E NL+ K+KA + Sbjct: 315 QAMEEYKRTKEEEAL--SQKKEEEELLKLHKQEALQMLKKKEKTDNLIKKEKATKKKKNE 372
Query: 202 ---PAISKEGVTSYASTSKNPHGLASSSKTGFQNFLSIADLAETYKETPRKEKIFQPKYS 32 P K+ +SY SK+ + + G N A ++ +KE +EK Y+ Sbjct: 373 NVDPNKPKKPASSYFLFSKDERKKLTEERPGTNNATVTALISLKWKELSEEEK---QVYN 429
Query: 31 GK 26 GK Sbjct: 430 GK 431
>tr|B2WS76|B2WS76_ARAHA High mobility group HMG1/2 family protein OS=Arabidopsis halleri GN=8F2.17 PE=4 SV=1 Length = 456
Score = 34.7 bits (78), Expect = 2.4 Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 6/122 (4%) Frame = -3
Query: 373 QWLDQHKASKEDTRLILSCSRGSEQHLQV*LMLDSDLLKSQESKTNLVDKDKAKLEL--- 203 Q ++++K +KE+ L S + E+ L++ LLK +E NL+ K+KA + Sbjct: 315 QAMEEYKRTKEEEAL--SQKKEEEELLKLHKQEALQLLKKKEKTDNLIKKEKATKKKKNE 372
Query: 202 ---PAISKEGVTSYASTSKNPHGLASSSKTGFQNFLSIADLAETYKETPRKEKIFQPKYS 32 P K+ +SY SK+ + G N A ++ +KE +EK K + Sbjct: 373 NIDPNKPKKPASSYFLFSKDERKRLIEERPGTNNSTVTALISVKWKELGEEEKQVYNKKA 432
Query: 31 GK 26 K Sbjct: 433 AK 434
>tr|B8F2H1|B8F2H1_BORGA Antigen, S1 OS=Borrelia garinii Far04 GN=BGAFAR04_A0007 PE=4 SV=1 Length = 397
Score = 34.3 bits (77), Expect = 3.2 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 1/83 (1%) Frame = -3
Query: 277 LDSDL-LKSQESKTNLVDKDKAKLELPAISKEGVTSYASTSKNPHGLASSSKTGFQNFLS 101 L+ DL + +K NL+ +K LE A T KNP L S + N L Sbjct: 23 LEEDLKTTTSHNKRNLIGNEKKSLESKKNKLGDSKKDAQTLKNPKNLMSINPDQTSNDLD 82
Query: 100 IADLAETYKETPRKEKIFQPKYS 32 D + + ++T K I +PK+S Sbjct: 83 NLDNSGSLQKTSSKHNISKPKHS 105
|