BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913271|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_D09.
         (544 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8IWN7|RP1L1_HUMAN Retinitis pigmentosa 1-like 1 protein OS=H...    28   2.7  
sp|Q60560|SMBP2_MESAU DNA-binding protein SMUBP-2 OS=Mesocricetu...    30   7.6  
sp|Q8BZB3|CO027_MOUSE Transmembrane protein C15orf27 homolog OS=...    30   7.6  
sp|Q9ESV1|LUZP1_RAT Leucine zipper protein 1 OS=Rattus norvegicu...    30   9.9  

>sp|Q8IWN7|RP1L1_HUMAN Retinitis pigmentosa 1-like 1 protein OS=Homo
           sapiens GN=RP1L1 PE=1 SV=3
          Length = 2480

 Score = 28.5 bits (62), Expect(2) = 2.7
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = -1

Query: 145 PRHSKHRWQYHCPLRSSSTKQ 83
           PRHS +R   H PL SS TKQ
Sbjct: 665 PRHSHYRKDTHSPLDSSVTKQ 685



 Score = 21.9 bits (45), Expect(2) = 2.7
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 245 SRSTPHSRASSPTLAETLPSSIPRRS 168
           SR++  S  SSP L    P   PR S
Sbjct: 643 SRASAMSSPSSPGLGRVAPRGHPRHS 668


>sp|Q60560|SMBP2_MESAU DNA-binding protein SMUBP-2 OS=Mesocricetus
           auratus GN=IGHMBP2 PE=2 SV=1
          Length = 989

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 378 ISQECIQHCSKK*CFSHSLLVMHTCTSASRAN 283
           + Q C+ HCS++ C SH L  +H C   +RA+
Sbjct: 903 LGQFCM-HCSRRYCLSHHLPEIHGCGEKARAH 933


>sp|Q8BZB3|CO027_MOUSE Transmembrane protein C15orf27 homolog OS=Mus
           musculus PE=2 SV=3
          Length = 538

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 18/90 (20%)
 Frame = -3

Query: 311 IHVHQPAEPTGLLEWNF---------CYYLCSRSTPHSR---------ASSPTLAETLPS 186
           I +HQP  P+ L   +          C    S +T HS          ASS TL  +   
Sbjct: 357 IDIHQPNVPSDLFSVDLPLKLSGNSTCASATSETTSHSTCGSVTRAQSASSQTLGSSTDC 416

Query: 185 SIPRRSLQGC*PQATSQ*APLAIPLPAQKL 96
           S PR  L    P++    +PL + LP Q+L
Sbjct: 417 STPREELLPSKPRS----SPLPLLLPPQQL 442


>sp|Q9ESV1|LUZP1_RAT Leucine zipper protein 1 OS=Rattus norvegicus
            GN=Luzp1 PE=2 SV=1
          Length = 1051

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 22/70 (31%), Positives = 31/70 (44%)
 Frame = -3

Query: 416  TIIIVAASRYVSRSPKSASNTVVKNSASRIRYS*CIHVHQPAEPTGLLEWNFCYYLCSRS 237
            T+ +  A R    SPK+ + TVV  S+  I+ S  +  +  A P   + W       S S
Sbjct: 853  TLQLTEAERVGDGSPKNRAETVVSRSSILIKPSDSVERNSHAFPAETIRWK------SHS 906

Query: 236  TPHSRASSPT 207
            T    ASS T
Sbjct: 907  TSSEVASSDT 916

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913271|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_D09.
         (544 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6LZJ0|B6LZJ0_BRAFL Putative uncharacterized protein (Fragmen...    39   0.23 
tr|A9FS23|A9FS23_SORC5 Putative uncharacterized protein OS=Soran...    35   3.3  
tr|A7AU91|A7AU91_BABBO ATP-dependent DNA helicase, RecQ family p...    34   4.4  
tr|Q67SX1|Q67SX1_SYMTH Phosphate ABC transporter permease protei...    34   4.4  
tr|A9SXS9|A9SXS9_PHYPA Predicted protein OS=Physcomitrella paten...    34   5.8  
tr|A6CFZ8|A6CFZ8_9PLAN ATP-dependent RNA helicase OS=Planctomyce...    33   7.4  
tr|Q22SK3|Q22SK3_TETTH Leucine Rich Repeat family protein OS=Tet...    33   9.7  
tr|A8ISR9|A8ISR9_CHLRE DnaJ-like protein (Fragment) OS=Chlamydom...    33   9.9  

>tr|B6LZJ0|B6LZJ0_BRAFL Putative uncharacterized protein (Fragment)
           OS=Branchiostoma floridae GN=BRAFLDRAFT_215807 PE=4 SV=1
          Length = 225

 Score = 38.5 bits (88), Expect = 0.23
 Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
 Frame = -3

Query: 239 STPHSRASSPTLAETLPSSIPRRSLQGC*PQATSQ*APLAIPL----PAQKLQHKTRQTR 72
           STP +     T   +L  S P+ SLQGC PQA+ Q + L + L    P   LQ  T Q  
Sbjct: 91  STPQAILQESTPQASLQKSTPQASLQGCTPQASLQGSTLQVSLQESTPQVSLQESTPQVS 150

Query: 71  QRHLFPLVLLNSRPTRPQRS 12
            +   P V L  + + PQ S
Sbjct: 151 LQESTPQVSL--QESTPQAS 168


>tr|A9FS23|A9FS23_SORC5 Putative uncharacterized protein
           OS=Sorangium cellulosum (strain So ce56) GN=sce5189 PE=4
           SV=1
          Length = 579

 Score = 34.7 bits (78), Expect = 3.3
 Identities = 26/83 (31%), Positives = 34/83 (40%)
 Frame = -3

Query: 425 KASTIIIVAASRYVSRSPKSASNTVVKNSASRIRYS*CIHVHQPAEPTGLLEWNFCYYLC 246
           +A  +     SR +SR P          +AS  R      +H  AEP G      C   C
Sbjct: 43  RAEALPSAMTSRRISRCPPEGCALRQIQAASTFRAGMVCGLHSRAEPEGDDPTQLCRARC 102

Query: 245 SRSTPHSRASSPTLAETLPSSIP 177
           + S   +RAS+PT     PSS P
Sbjct: 103 AASAARARASAPTRP---PSSQP 122


>tr|A7AU91|A7AU91_BABBO ATP-dependent DNA helicase, RecQ family
            protein OS=Babesia bovis GN=BBOV_II005510 PE=4 SV=1
          Length = 832

 Score = 34.3 bits (77), Expect = 4.4
 Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
 Frame = -3

Query: 506  SPMQFIYVPRTV-------HCPALIQKRHCSTTQKASTIIIVAASRYVSRSPKSASNTVV 348
            S M+FIY P +V       H      + +  T+   +   + +++R V  S  SAS T V
Sbjct: 693  SRMEFIYFPASVSILSTSKHAGTTATRMNLETSPTPAKKNLGSSTRRVKASG-SASTTNV 751

Query: 347  KNSASRIRYS*CIHVHQPAEPTGLLEWNFCYYLCSRS---TPHSRASSPTLAETLP 189
            K +         +++++P  P    E+N  Y + S+S   TP  R  + T  +T P
Sbjct: 752  KRATGAATSKKALNINKPFAPPTKCEFNTAYPMKSQSAPVTPAKRNYNKTGVKTTP 807


>tr|Q67SX1|Q67SX1_SYMTH Phosphate ABC transporter permease protein
           OS=Symbiobacterium thermophilum GN=STH237 PE=3 SV=1
          Length = 265

 Score = 34.3 bits (77), Expect = 4.4
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = +2

Query: 32  VLSLKVQGGRGAAVESALFC--AGASERAVVLPAVLTVTWLAASSLA 166
           +L+    GG G+     LF   A A     +LPA+L+  WLAA SLA
Sbjct: 19  LLAALAAGGAGSLTPEFLFTLPAAAGREGGILPAILSTLWLAAGSLA 65


>tr|A9SXS9|A9SXS9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_189506 PE=4 SV=1
          Length = 981

 Score = 33.9 bits (76), Expect = 5.8
 Identities = 22/42 (52%), Positives = 25/42 (59%), Gaps = 6/42 (14%)
 Frame = +2

Query: 182 WMMAKFQQA*---EKKL*NGAYF*---STSSNRNSIQGDQLA 289
           +   KF QA    E+KL NG YF     TSSN NS+Q DQLA
Sbjct: 730 YFKGKFNQARDVYERKLWNGEYFNYDSGTSSNSNSVQADQLA 771


>tr|A6CFZ8|A6CFZ8_9PLAN ATP-dependent RNA helicase OS=Planctomyces
           maris DSM 8797 GN=PM8797T_16902 PE=3 SV=1
          Length = 445

 Score = 33.5 bits (75), Expect = 7.4
 Identities = 19/61 (31%), Positives = 34/61 (55%)
 Frame = -3

Query: 215 SPTLAETLPSSIPRRSLQGC*PQATSQ*APLAIPLPAQKLQHKTRQTRQRHLFPLVLLNS 36
           +P  A+T+P+++  R + GC    T + A LA+P+   +L   +R++   H   LVL  +
Sbjct: 26  TPIQAQTIPAALEGRDVLGCAQTGTGKTAALALPI-LNQLGKNSRKSIPHHPLALVLAPT 84

Query: 35  R 33
           R
Sbjct: 85  R 85


>tr|Q22SK3|Q22SK3_TETTH Leucine Rich Repeat family protein
           OS=Tetrahymena thermophila SB210 GN=TTHERM_00001340 PE=4
           SV=1
          Length = 1576

 Score = 33.1 bits (74), Expect = 9.7
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = -3

Query: 464 PALIQKRHCSTTQKASTIIIVAASRYVSRSPKSASNTVV---KNSASRI 327
           P   Q  HC T  K   ++ +  S+ VS S   ASN ++   KN + RI
Sbjct: 339 PYAKQNEHCRTRSKTKQLLQIQCSQQVSNSQSKASNKIIQQTKNQSQRI 387


>tr|A8ISR9|A8ISR9_CHLRE DnaJ-like protein (Fragment) OS=Chlamydomonas
            reinhardtii GN=DNJ30 PE=4 SV=1
          Length = 3321

 Score = 33.1 bits (74), Expect = 9.9
 Identities = 20/44 (45%), Positives = 25/44 (56%)
 Frame = -2

Query: 183  HP*KKLARLLAASHVTVSTAGNTTARSEAPAQNKADSTAAPLPP 52
            HP K  A   AA+ VTV+TAG+T A   + A     + AAP PP
Sbjct: 3227 HPDKAAA---AAATVTVATAGDTAAAVSSSASVSVSAPAAPPPP 3267