BP913276 |
Clone id |
YMU001_000028_E02 |
Library |
YMU01 |
Length |
521 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000028_E02. |
Accession |
BP913276 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TGAAGTAGGCCTCATATATGACAACCACATATACATCTCCTAAGGTTACTTCCGGATTGG GTTTCAAACAAAAAGCCTATTGTTTGTCTATATGAAATAAAGTACATTTTCAACAATAAC TACACACATTGATCCATACATGAGCATTCCCCATCCACAAACTGGTGGACACAAAGTGCG TCCCTTATAATGATCTGTCGCTTTTCCACATTCGACACAATCTTCATTACACTATGACAA TCAACACAAGTACGGAGATTTTTTGTGATCCTTATAGTTGTCCCAGGAGGAGTAGTGATA AGGCCAAAAGCTAAGGCTAATCTCTCTGTATGCCCCCAAAGTATGTCCTCCTTCTCTTTG GCTGTTAACTGCCCAAGGACCACATTAAGCTGGGGTACATATCCTTCTTGTTCTATTACT TTTCTCAATCGTCGTATCTCCGCCATTATCTTGTCGTTGTCAGTGTGACTTTTATCATTT ACACAAAACTCATGCACCTTGCTCGCAACCTCAATCCACGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SMZ2 |
Definition |
sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana |
Align length |
130 |
Score (bit) |
117.0 |
E-value |
4.0e-26 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5AQE7 |
Definition |
tr|A5AQE7|A5AQE7_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
141 |
Score (bit) |
125.0 |
E-value |
1.0e-27 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913276|Adiantum capillus-veneris mRNA, clone: YMU001_000028_E02. (521 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5AQE7|A5AQE7_VITVI Putative uncharacterized protein OS=Vitis... 125 1e-27 tr|A9RJW2|A9RJW2_PHYPA Predicted protein OS=Physcomitrella paten... 121 2e-26 tr|A7PFU2|A7PFU2_VITVI Chromosome chr6 scaffold_15, whole genome... 121 2e-26 tr|A7P5P0|A7P5P0_VITVI Chromosome chr4 scaffold_6, whole genome ... 120 4e-26 tr|Q5W964|Q5W964_PHYPA PPR986-12 OS=Physcomitrella patens PE=2 SV=1 119 9e-26 tr|A9TNX6|A9TNX6_PHYPA Predicted protein OS=Physcomitrella paten... 119 9e-26 tr|A7P4F3|A7P4F3_VITVI Chromosome chr4 scaffold_6, whole genome ... 118 2e-25 tr|Q10IY6|Q10IY6_ORYSJ Os03g0441400 protein OS=Oryza sativa subs... 117 3e-25 tr|A2XIE6|A2XIE6_ORYSI Putative uncharacterized protein OS=Oryza... 117 3e-25 tr|A9S537|A9S537_PHYPA Predicted protein OS=Physcomitrella paten... 117 4e-25 tr|Q6F2D0|Q6F2D0_SOLDE Putative selenium-binding protein, relate... 116 6e-25 tr|Q60EM0|Q60EM0_ORYSJ Os05g0455900 protein OS=Oryza sativa subs... 116 8e-25 tr|A9T938|A9T938_PHYPA Predicted protein OS=Physcomitrella paten... 116 8e-25 tr|A2Y5C6|A2Y5C6_ORYSI Putative uncharacterized protein OS=Oryza... 116 8e-25 tr|A5AZT2|A5AZT2_VITVI Putative uncharacterized protein OS=Vitis... 115 1e-24 tr|A7QPS9|A7QPS9_VITVI Chromosome chr10 scaffold_138, whole geno... 115 1e-24 tr|A7NVM6|A7NVM6_VITVI Chromosome chr18 scaffold_1, whole genome... 115 1e-24 tr|A5B2K7|A5B2K7_VITVI Putative uncharacterized protein OS=Vitis... 115 1e-24 tr|A7QD49|A7QD49_VITVI Chromosome undetermined scaffold_80, whol... 115 2e-24 tr|A7Q5S4|A7Q5S4_VITVI Chromosome chr14 scaffold_54, whole genom... 115 2e-24 tr|A7PJL6|A7PJL6_VITVI Chromosome chr12 scaffold_18, whole genom... 115 2e-24 tr|A9T8E9|A9T8E9_PHYPA Predicted protein OS=Physcomitrella paten... 114 2e-24 tr|Q6K297|Q6K297_ORYSJ Os09g0251500 protein OS=Oryza sativa subs... 114 3e-24 tr|Q10PG4|Q10PG4_ORYSJ Os03g0235200 protein OS=Oryza sativa subs... 114 3e-24 tr|B8BDD4|B8BDD4_ORYSI Putative uncharacterized protein OS=Oryza... 114 3e-24 tr|A7PWA0|A7PWA0_VITVI Chromosome chr8 scaffold_34, whole genome... 114 3e-24 tr|A5AE49|A5AE49_VITVI Putative uncharacterized protein OS=Vitis... 114 3e-24 tr|A3BWH6|A3BWH6_ORYSJ Putative uncharacterized protein OS=Oryza... 114 3e-24 tr|Q8GRU0|Q8GRU0_ORYSJ Os07g0113500 protein OS=Oryza sativa subs... 114 4e-24 tr|B3U1U9|B3U1U9_CYCRE Pentatricopeptide repeat protein (Fragmen... 114 4e-24
>tr|A5AQE7|A5AQE7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020760 PE=3 SV=1 Length = 1148
Score = 125 bits (315), Expect = 1e-27 Identities = 62/141 (43%), Positives = 87/141 (61%) Frame = -1
Query: 515 IEVASKVHEFCVNDKSHTDNDKIMAEIRRLRKVIEQEGYVPQLNVVLGQLTAKEKEDILW 336 +EV S+VHE+ D SH +NDKI A++R L+ +++ GYVP+ VL + + KE+ L Sbjct: 678 LEVRSRVHEYRAGDTSHPENDKIYAKLRGLKAQMKEAGYVPETRFVLHDIDQEGKEEALL 737
Query: 335 GHTERLALAFGLXXXXXXXXXXXTKNLRTCVDCHSVMKIVSNVEKRQIIIRDALCVHQFV 156 H+ERLA+A+GL KNLR C DCH+ +KI+S + R++IIRDA H F Sbjct: 738 AHSERLAVAYGLLSSPARSPIRVIKNLRVCGDCHTALKIISKLVGRELIIRDAKRFHHFK 797
Query: 155 DGECSCMDQCV*LLLKMYFIS 93 DG CSC D C+ L + F S Sbjct: 798 DGLCSCRDYCIKPYLALIFPS 818
>tr|A9RJW2|A9RJW2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_175641 PE=4 SV=1 Length = 723
Score = 121 bits (303), Expect = 2e-26 Identities = 60/130 (46%), Positives = 79/130 (60%) Frame = -1
Query: 521 SWIEVASKVHEFCVNDKSHTDNDKIMAEIRRLRKVIEQEGYVPQLNVVLGQLTAKEKEDI 342 SWIEV KVH F V DKSH ++++I E+ +L + I++ GYVP VL + ++KE I Sbjct: 592 SWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVPDTRFVLHDVDEEQKERI 651
Query: 341 LWGHTERLALAFGLXXXXXXXXXXXTKNLRTCVDCHSVMKIVSNVEKRQIIIRDALCVHQ 162 L+ H+ERLA+ +GL KNLR C DCH+ K +S V R+II RDA H Sbjct: 652 LFSHSERLAITYGLMKTPPGMPIRIVKNLRVCGDCHTATKFISKVVGREIIARDAQRFHH 711
Query: 161 FVDGECSCMD 132 F DG CSC D Sbjct: 712 FADGVCSCGD 721
>tr|A7PFU2|A7PFU2_VITVI Chromosome chr6 scaffold_15, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017247001 PE=4 SV=1 Length = 868
Score = 121 bits (303), Expect = 2e-26 Identities = 64/130 (49%), Positives = 77/130 (59%) Frame = -1
Query: 521 SWIEVASKVHEFCVNDKSHTDNDKIMAEIRRLRKVIEQEGYVPQLNVVLGQLTAKEKEDI 342 SWIEV K+H F V D SH ++I A++ L I++ GYVP N VL + EKE Sbjct: 737 SWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFS 796
Query: 341 LWGHTERLALAFGLXXXXXXXXXXXTKNLRTCVDCHSVMKIVSNVEKRQIIIRDALCVHQ 162 L GH+E++ALAFGL KNLR C DCHS K +S VEKR II+RD H Sbjct: 797 LCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHH 856
Query: 161 FVDGECSCMD 132 FVDG CSC D Sbjct: 857 FVDGVCSCGD 866
>tr|A7P5P0|A7P5P0_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032605001 PE=4 SV=1 Length = 807
Score = 120 bits (301), Expect = 4e-26 Identities = 58/128 (45%), Positives = 81/128 (63%) Frame = -1
Query: 515 IEVASKVHEFCVNDKSHTDNDKIMAEIRRLRKVIEQEGYVPQLNVVLGQLTAKEKEDILW 336 +EV S+VHE+ D SH +NDKI A++R L+ +++ GYVP+ VL + + KE+ L Sbjct: 678 LEVRSRVHEYRAGDTSHPENDKIYAKLRGLKAQMKEAGYVPETRFVLHDIDQEGKEEALL 737
Query: 335 GHTERLALAFGLXXXXXXXXXXXTKNLRTCVDCHSVMKIVSNVEKRQIIIRDALCVHQFV 156 H+ERLA+A+GL KNLR C DCH+ +KI+S + R++IIRDA H F Sbjct: 738 AHSERLAVAYGLLSSPARSPIRVIKNLRVCGDCHTALKIISKLVGRELIIRDAKRFHHFK 797
Query: 155 DGECSCMD 132 DG CSC D Sbjct: 798 DGLCSCRD 805
>tr|Q5W964|Q5W964_PHYPA PPR986-12 OS=Physcomitrella patens PE=2 SV=1 Length = 986
Score = 119 bits (298), Expect = 9e-26 Identities = 60/130 (46%), Positives = 76/130 (58%) Frame = -1
Query: 521 SWIEVASKVHEFCVNDKSHTDNDKIMAEIRRLRKVIEQEGYVPQLNVVLGQLTAKEKEDI 342 SWIEV KVH F +DK+H ++I AE+ RL + Q GYVP VL + EKE Sbjct: 855 SWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQA 914
Query: 341 LWGHTERLALAFGLXXXXXXXXXXXTKNLRTCVDCHSVMKIVSNVEKRQIIIRDALCVHQ 162 L+ H+ERLA+ +GL +KNLR C DCH+ K +S + KRQII RD+ H Sbjct: 915 LFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHH 974
Query: 161 FVDGECSCMD 132 F DG CSC D Sbjct: 975 FKDGVCSCGD 984
>tr|A9TNX6|A9TNX6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_224041 PE=4 SV=1 Length = 986
Score = 119 bits (298), Expect = 9e-26 Identities = 60/130 (46%), Positives = 76/130 (58%) Frame = -1
Query: 521 SWIEVASKVHEFCVNDKSHTDNDKIMAEIRRLRKVIEQEGYVPQLNVVLGQLTAKEKEDI 342 SWIEV KVH F +DK+H ++I AE+ RL + Q GYVP VL + EKE Sbjct: 855 SWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQA 914
Query: 341 LWGHTERLALAFGLXXXXXXXXXXXTKNLRTCVDCHSVMKIVSNVEKRQIIIRDALCVHQ 162 L+ H+ERLA+ +GL +KNLR C DCH+ K +S + KRQII RD+ H Sbjct: 915 LFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHH 974
Query: 161 FVDGECSCMD 132 F DG CSC D Sbjct: 975 FKDGVCSCGD 984
>tr|A7P4F3|A7P4F3_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032129001 PE=4 SV=1 Length = 612
Score = 118 bits (295), Expect = 2e-25 Identities = 59/130 (45%), Positives = 80/130 (61%) Frame = -1
Query: 521 SWIEVASKVHEFCVNDKSHTDNDKIMAEIRRLRKVIEQEGYVPQLNVVLGQLTAKEKEDI 342 SWIEV + VHEF + D SH +++KI + IR L ++ GY P+ ++V+ + +EKED Sbjct: 481 SWIEVDNTVHEFFMGDLSHPESNKIYSMIRELMWKMKLAGYKPKTDLVVHSIDEEEKEDA 540
Query: 341 LWGHTERLALAFGLXXXXXXXXXXXTKNLRTCVDCHSVMKIVSNVEKRQIIIRDALCVHQ 162 L H+E+LA+AFGL KNLR C DCH KI+S + KR+II+RD H Sbjct: 541 LSIHSEKLAIAFGLISTSEGTTIRVVKNLRICNDCHDAAKIISGIVKREIIVRDRSRFHH 600
Query: 161 FVDGECSCMD 132 F DG CSC D Sbjct: 601 FKDGVCSCSD 610
>tr|Q10IY6|Q10IY6_ORYSJ Os03g0441400 protein OS=Oryza sativa subsp. japonica GN=Os03g0441400 PE=2 SV=1 Length = 837
Score = 117 bits (293), Expect = 3e-25 Identities = 54/130 (41%), Positives = 77/130 (59%) Frame = -1
Query: 521 SWIEVASKVHEFCVNDKSHTDNDKIMAEIRRLRKVIEQEGYVPQLNVVLGQLTAKEKEDI 342 SW+E+ ++H F V H D I A + L +EGY+P +NVVL + ++K + Sbjct: 706 SWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRM 765
Query: 341 LWGHTERLALAFGLXXXXXXXXXXXTKNLRTCVDCHSVMKIVSNVEKRQIIIRDALCVHQ 162 LW H+ERLALA+GL KNLR+C+DCH+ ++S + KR+II+RD H Sbjct: 766 LWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHH 825
Query: 161 FVDGECSCMD 132 F DG+CSC D Sbjct: 826 FEDGKCSCGD 835
>tr|A2XIE6|A2XIE6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12205 PE=4 SV=1 Length = 818
Score = 117 bits (293), Expect = 3e-25 Identities = 54/130 (41%), Positives = 77/130 (59%) Frame = -1
Query: 521 SWIEVASKVHEFCVNDKSHTDNDKIMAEIRRLRKVIEQEGYVPQLNVVLGQLTAKEKEDI 342 SW+E+ ++H F V H D I A + L +EGY+P +NVVL + ++K + Sbjct: 687 SWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRM 746
Query: 341 LWGHTERLALAFGLXXXXXXXXXXXTKNLRTCVDCHSVMKIVSNVEKRQIIIRDALCVHQ 162 LW H+ERLALA+GL KNLR+C+DCH+ ++S + KR+II+RD H Sbjct: 747 LWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHH 806
Query: 161 FVDGECSCMD 132 F DG+CSC D Sbjct: 807 FEDGKCSCGD 816
>tr|A9S537|A9S537_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_181369 PE=4 SV=1 Length = 833
Score = 117 bits (292), Expect = 4e-25 Identities = 59/130 (45%), Positives = 78/130 (60%) Frame = -1
Query: 521 SWIEVASKVHEFCVNDKSHTDNDKIMAEIRRLRKVIEQEGYVPQLNVVLGQLTAKEKEDI 342 +WIEVA KVH F V D+SH +I AE+ RL I++EGY+P VL + ++KE+ Sbjct: 702 TWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKREGYIPITQNVLHDVGEQQKEEA 761
Query: 341 LWGHTERLALAFGLXXXXXXXXXXXTKNLRTCVDCHSVMKIVSNVEKRQIIIRDALCVHQ 162 + H+E+LA+A+G+ KNLR C DCHS K +S V R+II RDA H Sbjct: 762 ISYHSEKLAIAYGVLSLPSGTPIRIYKNLRVCSDCHSASKFISKVTGREIIARDASRFHH 821
Query: 161 FVDGECSCMD 132 F DG CSC D Sbjct: 822 FKDGVCSCGD 831
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