BP913283
Clone id YMU001_000028_E09
Library
Length 574
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000028_E09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AACTGGAAGAATTCGCGGCCGCAGGTTTCCTTTGCACGTTCTCTCTGTGTGTGTTCAAAG
TAAAGAATTTCGGGTGAAAGCCAAAGTCTACCGTCCCATGGAGCCGGTTTCAAGGTAATC
ACTTTTTCCTCAAAGAGTGAGCCTCGGTTGTCTTGGGTAAAGACACGGAGTACACGAACG
CGGGATTAAACTATGGCCGACAAAGGGAAGGGCATTATGGAAGAGGGTTCCTCTTCACAC
GACAGACAAGAAATTACGCATGTTTGCCCTACCAAAAAGTGGTCAAATTAGGGCTGATTT
TTTGCTGCGTTTTTAGGGTTTGCAAGTATAAACCAAGATGAGATAGGGAGAGGTCTCACG
GTGGTAGATTCGCCACTAGATCTGCTGCGGGAGTGATGTGGGTCTGCCAAGTGGCACGCT
GCTCGCCGATTCTCTGAGGCAATTGCTTGGATTCTTTGATGCATGGTAAATCATCTTGAA
ATTTGAGCTTACTTGGTCGTGAGTAGTACGCTACAGTGTTGTGGAATTATGCTCGTTTGC
AAAGGCAAGAGCCTCTTGCACAGGTAAACAAATA
■■Homology search results ■■ -
sp_hit_id Q96BD0
Definition sp|Q96BD0|SO4A1_HUMAN Solute carrier organic anion transporter family member 4A1 OS=Homo sapiens
Align length 49
Score (bit) 32.3
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913283|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_E09.
(549 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q96BD0|SO4A1_HUMAN Solute carrier organic anion transporter f... 32 1.5
sp|Q2KHZ9|GCDH_BOVIN Glutaryl-CoA dehydrogenase, mitochondrial O... 32 2.6
sp|P45332|LPTG_HAEIN Lipopolysaccharide export system permease p... 31 3.5
sp|O15247|CLIC2_HUMAN Chloride intracellular channel protein 2 O... 30 5.9

>sp|Q96BD0|SO4A1_HUMAN Solute carrier organic anion transporter
family member 4A1 OS=Homo sapiens GN=SLCO4A1 PE=1 SV=2
Length = 722

Score = 32.3 bits (72), Expect = 1.5
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Frame = -3

Query: 418 IASENRRAACHLADPHHSRSRSSGEST------TVRPLPISSWFILANP 290
+ R A A+ H + S GE++ T+R LP+S W +L NP
Sbjct: 335 LPGSQRYAVMRAAEMHQLKDSSRGEASNPDFGKTIRDLPLSIWLLLKNP 383


>sp|Q2KHZ9|GCDH_BOVIN Glutaryl-CoA dehydrogenase, mitochondrial
OS=Bos taurus GN=GCDH PE=2 SV=1
Length = 438

Score = 31.6 bits (70), Expect = 2.6
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = -3

Query: 385 LADPHHSRSRSSGESTTVRPLPISSWFILANPKNAAKNQP*FDHFLVGQTCVISCL 218
L +P+H S SG T R P S +IL+ K N P D +V C SC+
Sbjct: 179 LTEPNHG-SDPSGMETRARHNPSSRSYILSGSKTWITNSPVADLLIVWARCEDSCI 233


>sp|P45332|LPTG_HAEIN Lipopolysaccharide export system permease
protein lptG OS=Haemophilus influenzae GN=lptG PE=3 SV=1
Length = 358

Score = 31.2 bits (69), Expect = 3.5
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -1

Query: 387 TWQTHITPAADLVANLPP*DLSLSHLGLYLQTLK-TQQKISPNLTTFW 247
TW+T +TP +L P LS+S L Y+ L+ T Q +S TFW
Sbjct: 226 TWETSLTPDKLGAVSLRPTSLSISGLYHYISFLRETGQDVSRFELTFW 273


>sp|O15247|CLIC2_HUMAN Chloride intracellular channel protein 2
OS=Homo sapiens GN=CLIC2 PE=1 SV=3
Length = 247

Score = 30.4 bits (67), Expect = 5.9
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3

Query: 117 PRLSWVKTRSTRTRD*TMADKGKGIMEEGSSSHDRQEITHVCPTKK 254
P+L+ +K + + RD + + G+ +++ R+E TH CP K
Sbjct: 188 PKLNIIKVAAKKYRDFDIPAEFSGVWRYLHNAYAREEFTHTCPEDK 233


tr_hit_id B0QW22
Definition tr|B0QW22|B0QW22_HAEPR Putative uncharacterized protein OS=Haemophilus parasuis 29755
Align length 81
Score (bit) 33.9
E-value 5.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913283|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_E09.
(549 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B0QW22|B0QW22_HAEPR Putative uncharacterized protein OS=Haemo... 34 5.9
tr|Q0UN80|Q0UN80_PHANO Putative uncharacterized protein OS=Phaeo... 33 9.8

>tr|B0QW22|B0QW22_HAEPR Putative uncharacterized protein
OS=Haemophilus parasuis 29755 GN=HPS_08251 PE=4 SV=1
Length = 355

Score = 33.9 bits (76), Expect = 5.9
Identities = 31/81 (38%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = -1

Query: 486 AYYSRPSKLKFQDDLPCIKESKQLPQRIGEQRATWQTHITPAADLVANLPP*DLSLSHLG 307
A YS L + D I ES R +Q TW+T ITP+ +A+L P LS+S L
Sbjct: 191 ATYSEQGWLLQKVDKSEIHESGITQTRETDQ--TWKTSITPSKLGIASLKPESLSISGLA 248

Query: 306 LYLQTLK-TQQKISPNLTTFW 247
Y+ LK T Q TFW
Sbjct: 249 DYVGFLKDTGQDPKRFEITFW 269


>tr|Q0UN80|Q0UN80_PHANO Putative uncharacterized protein
OS=Phaeosphaeria nodorum GN=SNOG_06784 PE=4 SV=1
Length = 494

Score = 33.1 bits (74), Expect = 9.8
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +2

Query: 158 GLNYGRQREGHYGRGFLFTRQTRNYACLPYQKVVKL-GLIFCCVFRVCKYKPR*D--RER 328
G+ Y R R YG GF TR R YA + V+ L GL+F + D ++
Sbjct: 422 GVAYMRLRRAQYGEGFWKTRGIRGYAGFFFNIVLCLIGLLFLTAGTYATVQSIIDGYKQA 481

Query: 329 SHGGRFATRSAA 364
S GG F RS A
Sbjct: 482 SFGGPFTCRSNA 493