BP913284
Clone id YMU001_000028_E10
Library
Length 307
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000028_E10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTACAAGCAACAAGATGAAGATGGAGCGCAAGAGCAAGAAACTGTGCAGGAGACACAGTC
GAGGAAAGAAAACAAACAAAAGGACCCTAGATCCACACCTCAGGGGGGAGCAGAAGCGGA
GGAAGTACCAGAGAAGCACAATGTAATAGAACCAACCCTTGCGGAGGGCACAGATGAGCT
GTTACATGAGGACTACGCCCACAAGTAACCTGCACTGCTATCTTAGAGCCAGATAATAGG
CTGACCATCAAGCACATAAGAGATCAGAAGAAATAGCTGGGATTAGGATCAACTGTAGAA
GAGAGAC
■■Homology search results ■■ -
sp_hit_id Q9Y618
Definition sp|Q9Y618|NCOR2_HUMAN Nuclear receptor corepressor 2 OS=Homo sapiens
Align length 67
Score (bit) 38.9
E-value 0.008
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913284|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_E10.
(307 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9Y618|NCOR2_HUMAN Nuclear receptor corepressor 2 OS=Homo sap... 39 0.008
sp|P50753|TNNT2_RAT Troponin T, cardiac muscle OS=Rattus norvegi... 33 0.44
sp|Q5DTT4|RGAG4_MOUSE Retrotransposon gag domain-containing prot... 32 0.99
sp|Q9WU42|NCOR2_MOUSE Nuclear receptor corepressor 2 OS=Mus musc... 32 1.3
sp|Q9JHY8|DNLI1_RAT DNA ligase 1 OS=Rattus norvegicus GN=Lig1 PE... 32 1.3
sp|Q64318|ZEB1_MOUSE Zinc finger E-box-binding homeobox 1 OS=Mus... 31 1.7
sp|Q54G21|FKBP5_DICDI FK506-binding protein 5 OS=Dictyostelium d... 31 1.7
sp|O60673|DPOLZ_HUMAN DNA polymerase zeta catalytic subunit OS=H... 31 1.7
sp|P48988|CENPB_CRIGR Major centromere autoantigen B OS=Cricetul... 31 1.7
sp|Q5R4J9|NARG1_PONAB NMDA receptor-regulated protein 1 OS=Pongo... 31 2.2
sp|Q80UM3|NARG1_MOUSE NMDA receptor-regulated protein 1 OS=Mus m... 31 2.2
sp|Q9BXJ9|NARG1_HUMAN NMDA receptor-regulated protein 1 OS=Homo ... 31 2.2
sp|O43109|HSP90_PODAN Heat shock protein 90 homolog OS=Podospora... 31 2.2
sp|Q6BYE5|ASF1_DEBHA Histone chaperone ASF1 OS=Debaryomyces hans... 31 2.2
sp|Q6CN28|SMI1_KLULA KNR4/SMI1 homolog OS=Kluyveromyces lactis G... 30 2.9
sp|P37275|ZEB1_HUMAN Zinc finger E-box-binding homeobox 1 OS=Hom... 30 3.8
sp|P24545|PMA1_ZYGRO Plasma membrane ATPase OS=Zygosaccharomyces... 30 3.8
sp|A1L1M4|P4R2B_DANRE Serine/threonine-protein phosphatase 4 reg... 30 3.8
sp|Q01538|MYT1_HUMAN Myelin transcription factor 1 OS=Homo sapie... 30 3.8
sp|Q54TE3|GTAJ_DICDI GATA zinc finger domain-containing protein ... 30 3.8
sp|P11827|GLCAP_SOYBN Beta-conglycinin, alpha' chain OS=Glycine ... 30 3.8
sp|Q6CFS5|CBK1_YARLI Serine/threonine-protein kinase CBK1 OS=Yar... 30 3.8
sp|Q61329|ZFHX3_MOUSE Zinc finger homeobox protein 3 OS=Mus musc... 30 4.9
sp|Q550K8|Y7071_DICDI Probable serine/threonine-protein kinase D... 30 4.9
sp|Q55GC2|DST2_DICDI Serine/threonine-protein kinase dst2 OS=Dic... 30 4.9
sp|Q59MW2|DBP6_CANAL ATP-dependent RNA helicase DBP6 OS=Candida ... 30 4.9
sp|Q55GG4|Y9847_DICDI Probable serine/threonine-protein kinase D... 29 6.4
sp|P0C7V8|WD42C_HUMAN WD repeat-containing protein 42C OS=Homo s... 29 6.4
sp|A5DUA3|SNU71_LODEL U1 small nuclear ribonucleoprotein compone... 29 6.4
sp|Q6ZW49|PAXI1_HUMAN PAX-interacting protein 1 OS=Homo sapiens ... 29 6.4

>sp|Q9Y618|NCOR2_HUMAN Nuclear receptor corepressor 2 OS=Homo
sapiens GN=NCOR2 PE=1 SV=1
Length = 2517

Score = 38.9 bits (89), Expect = 0.008
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = +2

Query: 5 KQQDEDGAQEQETVQETQSRKENKQKDPRSTPQGGAEAEEVPEKHNVIEPTLAEGTDELL 184
+QQ + Q+Q+ Q+ R ++KD + + + EE PE N E L E TD+
Sbjct: 495 QQQQQQQQQQQQQQQQPMPRSSQEEKDEKEKEKEAEKEEEKPEVENDKEDLLKEKTDDTS 554

Query: 185 HEDYAHK 205
ED K
Sbjct: 555 GEDNDEK 561


>sp|P50753|TNNT2_RAT Troponin T, cardiac muscle OS=Rattus norvegicus
GN=Tnnt2 PE=1 SV=2
Length = 299

Score = 33.1 bits (74), Expect = 0.44
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +2

Query: 5 KQQDEDGAQEQETVQETQSRKENKQKDPRSTPQGGAEAEE 124
+Q++ED ++E+E QE +E+ + +P P+G AEAEE
Sbjct: 14 EQEEEDWSEEEEDEQEEAVEEEDGEAEP--DPEGEAEAEE 51


>sp|Q5DTT4|RGAG4_MOUSE Retrotransposon gag domain-containing protein
4 OS=Mus musculus GN=Rgag4 PE=2 SV=2
Length = 599

Score = 32.0 bits (71), Expect = 0.99
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +2

Query: 2 YKQQDEDG-AQEQETVQETQSRKENKQKDPRSTPQGGAEAEEVPEKHNVIEPTLAEGTDE 178
++++DED +E+E +E + KE + K+ S E +EV + V+EP + +E
Sbjct: 409 FEEEDEDDDDEEEEEEEEEEEDKEEEMKNEDSDENKYEEEDEVIVR--VLEPEQEQEREE 466

Query: 179 LLHED-YAHK 205
+ HE Y H+
Sbjct: 467 IEHEHVYVHE 476


>sp|Q9WU42|NCOR2_MOUSE Nuclear receptor corepressor 2 OS=Mus
musculus GN=Ncor2 PE=1 SV=2
Length = 2472

Score = 31.6 bits (70), Expect = 1.3
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +2

Query: 5 KQQDEDGAQEQETVQETQSRKENKQKDPRSTPQGGAEAEEVPEKHNVIEPTLAEGTDELL 184
+QQ + Q+Q+ + +Q KE K+K+ + + EE + N E E TD+
Sbjct: 496 QQQQQQQQQQQQMARSSQEEKEEKEKEKEADKE-----EEKQDAENEKEELSKEKTDDTS 550

Query: 185 HEDYAHK 205
ED K
Sbjct: 551 GEDNDEK 557


>sp|Q9JHY8|DNLI1_RAT DNA ligase 1 OS=Rattus norvegicus GN=Lig1 PE=2
SV=1
Length = 918

Score = 31.6 bits (70), Expect = 1.3
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +2

Query: 32 EQETVQETQSRKENKQKDPRSTPQGGAEAEEVPEKHNVIE 151
E+ + ++ K+ K++DP++ P+ EAEEV +K +E
Sbjct: 139 EEPNEDKAKAVKKRKKEDPQTPPESLTEAEEVNQKEEQVE 178


>sp|Q64318|ZEB1_MOUSE Zinc finger E-box-binding homeobox 1 OS=Mus
musculus GN=Zeb1 PE=2 SV=1
Length = 1117

Score = 31.2 bits (69), Expect = 1.7
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +2

Query: 5 KQQDEDGAQEQETVQETQSRKENKQKDPRSTPQGGAEAEEVPEKHNVIEPTLAEGTDELL 184
+++DED +E+E +E + +E ++ PQG E EE E+ E DE
Sbjct: 1012 REEDEDSEKEEE--EEDKEMEELQEGKECENPQGEEEEEEEEEEEEEEEEEEEVEADEAE 1069

Query: 185 HE 190
HE
Sbjct: 1070 HE 1071


>sp|Q54G21|FKBP5_DICDI FK506-binding protein 5 OS=Dictyostelium
discoideum GN=fkbp5 PE=3 SV=1
Length = 1622

Score = 31.2 bits (69), Expect = 1.7
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2

Query: 5 KQQDEDGAQEQETVQETQSRKENKQKDPRSTPQGGAEAEEVPEK 136
KQQ + +E+E V+E + +E K+++ + + E EE E+
Sbjct: 1043 KQQQQQEKEEEEVVEEEEKEEEEKEEEEKEEEEKEEEKEEEKEQ 1086


>sp|O60673|DPOLZ_HUMAN DNA polymerase zeta catalytic subunit OS=Homo
sapiens GN=REV3L PE=1 SV=2
Length = 3130

Score = 31.2 bits (69), Expect = 1.7
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2

Query: 32 EQETVQETQSRKENKQKDPRSTPQGGAEAEEVPEKHNVIEPTLAEGTDELL 184
+Q+T ++ SRK KD + Q GAE + V + NV E + G +LL
Sbjct: 1211 KQKTNEKGTSRKHTTLKDEKIKSQSGAEVKFVLKHQNVSEFASSSGGSQLL 1261


>sp|P48988|CENPB_CRIGR Major centromere autoantigen B OS=Cricetulus
griseus GN=CENPB PE=3 SV=1
Length = 606

Score = 31.2 bits (69), Expect = 1.7
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +2

Query: 8 QQDEDGAQEQETVQETQSRKENKQKDPRSTPQGGAEAEEVPEKHNVIE 151
+++E+ +E+E +E + E ++++ + G E EEV E+ V E
Sbjct: 406 EEEEEEEEEEEEEEEEEGEGEEEEEEEEEGEEEGGEGEEVGEEEEVEE 453


>sp|Q5R4J9|NARG1_PONAB NMDA receptor-regulated protein 1 OS=Pongo
abelii GN=NARG1 PE=2 SV=1
Length = 866

Score = 30.8 bits (68), Expect = 2.2
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2

Query: 29 QEQETVQETQSRKENKQKDPRSTPQGGAEAEEVPEKHNVIEPTLAE 166
+++ +E Q R + K+KD GG + E +PEK +E L E
Sbjct: 611 EKKNAEKEKQQRNQKKKKDDDDEEIGGPKEELIPEKLAKVETPLEE 656


tr_hit_id B6K9H1
Definition tr|B6K9H1|B6K9H1_TOXGO Eukaryotic translation initiation factor 4E, putative OS=Toxoplasma gondii ME49
Align length 44
Score (bit) 39.7
E-value 0.077
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913284|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_E10.
(307 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6K9H1|B6K9H1_TOXGO Eukaryotic translation initiation factor ... 40 0.077
tr|Q59GM0|Q59GM0_HUMAN Nuclear receptor co-repressor 2 variant (... 39 0.13
tr|Q56D06|Q56D06_HUMAN SMRTE-tau OS=Homo sapiens PE=2 SV=1 39 0.13
tr|B6K8M3|B6K8M3_TOXGO Leucine rich repeat protein, putative OS=... 38 0.29
tr|B6K901|B6K901_TOXGO Putative uncharacterized protein OS=Toxop... 37 0.65
tr|B8MY35|B8MY35_ASPFL TBC domain protein, putative OS=Aspergill... 35 1.4
tr|A5E367|A5E367_LODEL Putative uncharacterized protein OS=Lodde... 35 1.4
tr|A5K9I0|A5K9I0_PLAVI Putative uncharacterized protein OS=Plasm... 35 1.5
tr|B0W357|B0W357_CULQU Translational activator gcn1 OS=Culex qui... 35 1.9
tr|A7S1L3|A7S1L3_NEMVE Predicted protein OS=Nematostella vectens... 35 1.9
tr|B2B7E7|B2B7E7_PODAN Predicted CDS Pa_2_10850 OS=Podospora ans... 35 1.9
tr|A3DF03|A3DF03_CLOTH Putative uncharacterized protein OS=Clost... 35 2.5
tr|B4BES2|B4BES2_CLOTM Putative uncharacterized protein OS=Clost... 35 2.5
tr|Q19LF1|Q19LF1_PIG Nuclear receptor corepressor 2 OS=Sus scrof... 35 2.5
tr|Q19LF0|Q19LF0_PIG Nuclear receptor corepressor 2 OS=Sus scrof... 35 2.5
tr|Q91255|Q91255_PETMA NF-180 OS=Petromyzon marinus PE=2 SV=1 34 3.2
tr|B5LTQ3|B5LTQ3_HAEIN IgA1-specific serine endopeptidase (Fragm... 34 3.2
tr|A6QQT0|A6QQT0_BOVIN HMG2L1 protein OS=Bos taurus GN=HMG2L1 PE... 34 3.2
tr|Q23JX3|Q23JX3_TETTH Putative uncharacterized protein (Fragmen... 34 3.2
tr|A2DQV3|A2DQV3_TRIVA Putative uncharacterized protein OS=Trich... 34 3.2
tr|A0C9J0|A0C9J0_PARTE Chromosome undetermined scaffold_16, whol... 34 3.2
tr|B2W3G7|B2W3G7_PYRTR Predicted protein OS=Pyrenophora tritici-... 34 3.2
tr|Q54P37|Q54P37_DICDI Putative uncharacterized protein OS=Dicty... 34 4.2
tr|A2EBY4|A2EBY4_TRIVA Putative uncharacterized protein OS=Trich... 34 4.2
tr|A0DGL8|A0DGL8_PARTE Chromosome undetermined scaffold_5, whole... 34 4.2
tr|B2RXH9|B2RXH9_HUMAN WDR42C protein OS=Homo sapiens GN=WDR42C ... 34 4.2
tr|Q5F363|Q5F363_CHICK Putative uncharacterized protein OS=Gallu... 33 5.5
tr|Q9TX81|Q9TX81_PLACH Hsp70-like protein OS=Plasmodium chabaudi... 33 5.5
tr|Q4XXX8|Q4XXX8_PLACH Putative uncharacterized protein (Fragmen... 33 5.5
tr|Q4XU69|Q4XU69_PLACH Putative uncharacterized protein (Fragmen... 33 5.5

>tr|B6K9H1|B6K9H1_TOXGO Eukaryotic translation initiation factor 4E,
putative OS=Toxoplasma gondii ME49 GN=TGME49_115150 PE=4
SV=1
Length = 455

Score = 39.7 bits (91), Expect = 0.077
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +2

Query: 11 QDEDGAQEQETVQETQSRKENKQKDPRSTPQGGAEAEEVPEKHN 142
Q +G QE +E + KE +K P GG EAEE PEK N
Sbjct: 408 QPPEGKQETAANRENEKSKETGKKKATKAPGGGGEAEEAPEKKN 451


>tr|Q59GM0|Q59GM0_HUMAN Nuclear receptor co-repressor 2 variant
(Fragment) OS=Homo sapiens PE=2 SV=1
Length = 1469

Score = 38.9 bits (89), Expect = 0.13
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = +2

Query: 5 KQQDEDGAQEQETVQETQSRKENKQKDPRSTPQGGAEAEEVPEKHNVIEPTLAEGTDELL 184
+QQ + Q+Q+ Q+ R ++KD + + + EE PE N E L E TD+
Sbjct: 513 QQQQQQQQQQQQQQQQPMPRSSQEEKDEKEKEKEAEKEEEKPEVENDKEDLLKEKTDDTS 572

Query: 185 HEDYAHK 205
ED K
Sbjct: 573 GEDNDEK 579


>tr|Q56D06|Q56D06_HUMAN SMRTE-tau OS=Homo sapiens PE=2 SV=1
Length = 2461

Score = 38.9 bits (89), Expect = 0.13
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = +2

Query: 5 KQQDEDGAQEQETVQETQSRKENKQKDPRSTPQGGAEAEEVPEKHNVIEPTLAEGTDELL 184
+QQ + Q+Q+ Q+ R ++KD + + + EE PE N E L E TD+
Sbjct: 494 QQQQQQQQQQQQQQQQPMPRSSQEEKDEKEKEKEAEKEEEKPEVENDKEDLLKEKTDDTS 553

Query: 185 HEDYAHK 205
ED K
Sbjct: 554 GEDNDEK 560


>tr|B6K8M3|B6K8M3_TOXGO Leucine rich repeat protein, putative
OS=Toxoplasma gondii ME49 GN=TGME49_111650 PE=4 SV=1
Length = 1710

Score = 37.7 bits (86), Expect = 0.29
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +2

Query: 11 QDEDGAQEQETVQETQSRKENKQKDPRSTPQGGAEAEEVP 130
++E+GA+E+E V++ S E+K+++ RS+ G E E P
Sbjct: 1117 EEEEGAEEEEEVEDEDSEAEDKEEETRSSRTSGEELETAP 1156


>tr|B6K901|B6K901_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_113130 PE=4 SV=1
Length = 1204

Score = 36.6 bits (83), Expect = 0.65
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +2

Query: 8 QQDEDGAQEQETVQETQSRKENKQKDPRSTPQGGAEAEEVPEKHNVIEPTLAEGTDELLH 187
+++ED +E+E +E + KE ++++ + EAEE ++ V E E DE +
Sbjct: 478 EEEEDKEEEEEDKEEDEEDKEEEEEEDQGEDVQREEAEEAGDRRGVGEQMATEADDEFMT 537

Query: 188 ED 193
E+
Sbjct: 538 EE 539


>tr|B8MY35|B8MY35_ASPFL TBC domain protein, putative OS=Aspergillus
flavus NRRL3357 GN=AFLA_079720 PE=4 SV=1
Length = 827

Score = 35.4 bits (80), Expect = 1.4
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 7/54 (12%)
Frame = +2

Query: 20 DGAQEQETVQETQSRKENKQKDP-----RSTPQGGAEAE--EVPEKHNVIEPTL 160
D +QE QE+++R+E+ +KDP T Q G EAE E P + + + P+L
Sbjct: 211 DQNDDQEDTQESRNRQEDNEKDPTPTSTAPTEQNGTEAELLEAPVRRSKLPPSL 264


>tr|A5E367|A5E367_LODEL Putative uncharacterized protein
OS=Lodderomyces elongisporus GN=LELG_04054 PE=4 SV=1
Length = 719

Score = 35.4 bits (80), Expect = 1.4
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2

Query: 5 KQQDEDGAQEQETVQETQSRKENKQKDPRSTPQGGAEAEEVPEKH 139
+QQDE+ QEQE Q+ +N+Q + Q G+E +E E+H
Sbjct: 62 QQQDEEQQQEQEQQQQDVQEHDNQQDVQHNKEQQGSEQDEQHEQH 106


>tr|A5K9I0|A5K9I0_PLAVI Putative uncharacterized protein
OS=Plasmodium vivax GN=PVX_080355 PE=4 SV=1
Length = 1421

Score = 35.4 bits (80), Expect = 1.5
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +3

Query: 9 NKMK--MERKSKKLCRRHSRGKKTNKRTLDPHLRGEQKRRKYQ 131
NK+K +ERK +KLCR + KK R +R E+K+ K Q
Sbjct: 565 NKLKEELERKERKLCREEEKEKKNRMREEKKRMREEKKKMKEQ 607


>tr|B0W357|B0W357_CULQU Translational activator gcn1 OS=Culex
quinquefasciatus GN=CpipJ_CPIJ001363 PE=4 SV=1
Length = 2651

Score = 35.0 bits (79), Expect = 1.9
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = +2

Query: 2 YKQQDEDGAQEQETVQETQSRKENKQKDPRSTPQGGAEAEEVPEKHNVIEPTLAEGTD 175
YK+Q E+ A +E E + RKE K K P+ TP+ E+ EK I+ L E D
Sbjct: 781 YKEQVEELALRREI--EEKRRKEGKSKPPQLTPKQKEAIEKQTEKERAIKARLRELAD 836


>tr|A7S1L3|A7S1L3_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g242217 PE=4 SV=1
Length = 462

Score = 35.0 bits (79), Expect = 1.9
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2

Query: 2 YKQQDEDGAQEQETVQETQSRKENK-QKDPRSTPQGGAEAEEVPEKHNVIEPTLAEGTDE 178
Y + ED + T +E R E + +K P STPQ E E+PE+ VI T E T E
Sbjct: 324 YVWKREDAPPQTSTEKEGPERHEEEGRKSPVSTPQKEKEVAEIPERDIVIAVTDNEDTVE 383