BP913285
Clone id YMU001_000028_E12
Library
Length 563
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000028_E12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTGAGATATTACCTGCAGGTACTCACTCTGCTGGAAAAGCTGGCAGAAGACAGAAAGGGC
CGCTTGCCATCGGCTTGGAGCAAAATGCTACGCCAGTGCAAGAGATCAAGTAGTGTGTCA
CAGTCTTCTACCGAGTCGGATTCTGCGGACTCTTCCACAAGTGAAAGCGATGGATAAACG
CTTTCTAGGTTGAGGCAGCAACCGCCAGTCTCAATGTCCTTAGCATGAGCAACGGCCCCT
ACTTATGACCACACTTCCTTAATAGAGGGGTAGCTGCAAGAAGTAGAAGATGTCTTGGGC
TATCCACCACTAAAATTACACCCGATATCTCAAACAAACCTGCTCTGCACAGCAAATGTC
GGTAGTCTAGAATTTTTGACAGAAGACTTACCCTCCAACAAGGTTAAAGCTGATCATTAT
AAGTGTCACTCTTGATCCATATTTTCTTTATAAAAATGTTCGTCCCCAGCGGGGATTCAT
GCTAGTGTCCATACCTTAGGACTGTTTGTACTTTTACCTCAACACAACTCTTGCCTGGAC
TTCACTATACACTAAAGGTGGAT
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913285|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_E12.
(563 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q9U3L8
Definition tr|Q9U3L8|Q9U3L8_CAEEL Protein C47A4.2b, partially confirmed by transcript evidence OS=Caenorhabditis elegans
Align length 57
Score (bit) 35.0
E-value 2.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913285|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_E12.
(563 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9U3L8|Q9U3L8_CAEEL Protein C47A4.2b, partially confirmed by ... 35 2.8
tr|Q7JKL2|Q7JKL2_CAEEL Protein C47A4.2a, partially confirmed by ... 35 2.8
tr|Q2EEN3|Q2EEN3_CAEEL Protein C47A4.2c, partially confirmed by ... 35 2.8

>tr|Q9U3L8|Q9U3L8_CAEEL Protein C47A4.2b, partially confirmed by
transcript evidence OS=Caenorhabditis elegans GN=C47A4.2
PE=4 SV=2
Length = 451

Score = 35.0 bits (79), Expect = 2.8
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +2

Query: 386 TYPPTRLKLI--IISVTLDPYFLYKNVRPQRGFMLVSIP*DCLYFYLNTTLAWTSLY 550
T+P RL ++ +I + P+F++ N P M V + ++F+ NT LA+TS Y
Sbjct: 345 TFPGPRLLIVPCVIRLLFIPFFMFSNYLPHSRTMGVLFTNEWIFFFGNTLLAFTSGY 401


>tr|Q7JKL2|Q7JKL2_CAEEL Protein C47A4.2a, partially confirmed by
transcript evidence OS=Caenorhabditis elegans GN=C47A4.2
PE=4 SV=1
Length = 445

Score = 35.0 bits (79), Expect = 2.8
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +2

Query: 386 TYPPTRLKLI--IISVTLDPYFLYKNVRPQRGFMLVSIP*DCLYFYLNTTLAWTSLY 550
T+P RL ++ +I + P+F++ N P M V + ++F+ NT LA+TS Y
Sbjct: 339 TFPGPRLLIVPCVIRLLFIPFFMFSNYLPHSRTMGVLFTNEWIFFFGNTLLAFTSGY 395


>tr|Q2EEN3|Q2EEN3_CAEEL Protein C47A4.2c, partially confirmed by
transcript evidence OS=Caenorhabditis elegans GN=C47A4.2
PE=4 SV=1
Length = 383

Score = 35.0 bits (79), Expect = 2.8
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +2

Query: 386 TYPPTRLKLI--IISVTLDPYFLYKNVRPQRGFMLVSIP*DCLYFYLNTTLAWTSLY 550
T+P RL ++ +I + P+F++ N P M V + ++F+ NT LA+TS Y
Sbjct: 277 TFPGPRLLIVPCVIRLLFIPFFMFSNYLPHSRTMGVLFTNEWIFFFGNTLLAFTSGY 333