BP913289
Clone id YMU001_000028_F05
Library
Length 436
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000028_F05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GGTAATCCTTGTTCTCGCTGCTGATGAGTTCATGAGCGTGTCAAAACGCAGTTCAAAATG
TAGTTCTCTCATTTGGCTGGCAGGCCAACCCACCGAGAACAGCAATGCAGTGTAAGCTGT
AGCGACAACGAGAGATGCCGCCTTACAGATGCCCTTCTCAGAATTGAAACCTCTCTTTAG
ACTGGTCCGATCTTTACAACGGGAAAAAAATGAGCTCCTACTCCCCTCTTGGAGCATTGG
ATGTAAGAACCTCCTCTAGTTGCTCCGCATCGCTCGGGGTCCTCAATTTGATTAAGTAAA
GCCTCCCTTTCCCAGAATCTGTTTCTTGACTGTCACTCCCTTGGACTTTAACGTCTGCTT
CAGCTGAATGAAAGATCCCAGCAACTGTGTTTTTCTGAACATTCATCTTCATGTTCGGGT
ATAATAAAGCATTGAG
■■Homology search results ■■ -
sp_hit_id A8MU46
Definition sp|A8MU46|SMTL1_HUMAN Smoothelin-like protein 1 OS=Homo sapiens
Align length 66
Score (bit) 29.6
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913289|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_F05.
(418 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A8MU46|SMTL1_HUMAN Smoothelin-like protein 1 OS=Homo sapiens ... 30 4.9
sp|Q8E245|ISPE_STRA5 4-diphosphocytidyl-2-C-methyl-D-erythritol ... 30 4.9
sp|Q8E7K5|ISPE_STRA3 4-diphosphocytidyl-2-C-methyl-D-erythritol ... 30 4.9
sp|Q3K3L9|ISPE_STRA1 4-diphosphocytidyl-2-C-methyl-D-erythritol ... 30 4.9
sp|P47751|BRS4_BOMOR [Phe13]-bombesin receptor OS=Bombina orient... 30 4.9
sp|Q8XZR1|HBOH_RALSO D-(-)-3-hydroxybutyrate oligomer hydrolase ... 29 6.4

>sp|A8MU46|SMTL1_HUMAN Smoothelin-like protein 1 OS=Homo sapiens
GN=Smtnl1 PE=2 SV=1
Length = 457

Score = 29.6 bits (65), Expect = 4.9
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = -1

Query: 409 KMNVQKNTVAGIFHSAEADVKVQGSDSQETDSGKGRLYLIKLRT---PSDAEQLEEVLTS 239
++ V+ AG AEA++K + + +ET G + K T P +AE+ E L S
Sbjct: 75 EVKVESQREAGGKEDAEAELKKEDGEKEETTVGSQEMTGRKEETKSEPKEAEEKESTLAS 134

Query: 238 NAPRGE 221
+ E
Sbjct: 135 EKQKAE 140


>sp|Q8E245|ISPE_STRA5 4-diphosphocytidyl-2-C-methyl-D-erythritol
kinase OS=Streptococcus agalactiae serotype V GN=ispE
PE=3 SV=1
Length = 283

Score = 29.6 bits (65), Expect = 4.9
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -2

Query: 234 LQEGSRSSFFSRCKDRTSLKRGFNSEKGICK 142
L GS + FS C R FNS KG CK
Sbjct: 244 LMTGSGPTVFSMCSTEKKADRVFNSMKGFCK 274


>sp|Q8E7K5|ISPE_STRA3 4-diphosphocytidyl-2-C-methyl-D-erythritol
kinase OS=Streptococcus agalactiae serotype III GN=ispE
PE=3 SV=1
Length = 283

Score = 29.6 bits (65), Expect = 4.9
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -2

Query: 234 LQEGSRSSFFSRCKDRTSLKRGFNSEKGICK 142
L GS + FS C R FNS KG CK
Sbjct: 244 LMTGSGPTVFSMCSTEKKADRVFNSMKGFCK 274


>sp|Q3K3L9|ISPE_STRA1 4-diphosphocytidyl-2-C-methyl-D-erythritol
kinase OS=Streptococcus agalactiae serotype Ia GN=ispE
PE=3 SV=1
Length = 283

Score = 29.6 bits (65), Expect = 4.9
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -2

Query: 234 LQEGSRSSFFSRCKDRTSLKRGFNSEKGICK 142
L GS + FS C R FNS KG CK
Sbjct: 244 LMTGSGPTVFSMCSTEKKADRVFNSMKGFCK 274


>sp|P47751|BRS4_BOMOR [Phe13]-bombesin receptor OS=Bombina
orientalis GN=BB4 PE=2 SV=2
Length = 392

Score = 29.6 bits (65), Expect = 4.9
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = -2

Query: 219 RSSFFSRCKDRTSLKRGFNSEKGICKAASLVVATAYTALLFSVGWPASQMRELHFELRFD 40
+S+F ++ T ++ S K + K ++VA LF+V W + M L+ +
Sbjct: 245 KSTFNMPAEEHTHARKQIESRKRVAKTVLVLVA------LFAVCWLPNHMLYLYRSFTYH 298

Query: 39 TLMNSSA 19
+ +NSSA
Sbjct: 299 SAVNSSA 305


>sp|Q8XZR1|HBOH_RALSO D-(-)-3-hydroxybutyrate oligomer hydrolase
OS=Ralstonia solanacearum GN=RSc1334 PE=3 SV=1
Length = 725

Score = 29.3 bits (64), Expect = 6.4
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = -2

Query: 150 ICKAASLVVATAYTALLFS--VGWPASQMRELHFELRFDTLMNSSAA 16
+C A+S V+ A T F+ VGWPAS LR + L++S+ A
Sbjct: 386 LCAASSSGVSAAPTQAFFAGAVGWPASVQANRCAALRANGLLSSATA 432


tr_hit_id B7ZZN7
Definition tr|B7ZZN7|B7ZZN7_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 61
Score (bit) 46.2
E-value 0.0008
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913289|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_F05.
(418 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7ZZN7|B7ZZN7_MAIZE Putative uncharacterized protein OS=Zea m... 46 8e-04
tr|A7QKE8|A7QKE8_VITVI Chromosome chr2 scaffold_112, whole genom... 43 0.009
tr|Q75HB3|Q75HB3_ORYSJ Expressed protein, 5'-partial (Fragment) ... 42 0.012
tr|Q60DL9|Q60DL9_ORYSJ Os03g0667700 protein OS=Oryza sativa subs... 42 0.012
tr|Q10FH5|Q10FH5_ORYSJ cDNA, clone: J043022O19, full insert sequ... 42 0.012
tr|Q10FH4|Q10FH4_ORYSJ RanBP1 domain containing protein, express... 42 0.012
tr|B8AP25|B8AP25_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.012
tr|A3AL66|A3AL66_ORYSJ Putative uncharacterized protein OS=Oryza... 42 0.012
tr|Q6AC15|Q6AC15_LEIXX Integral membrane protein OS=Leifsonia xy... 33 9.2

>tr|B7ZZN7|B7ZZN7_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 315

Score = 46.2 bits (108), Expect = 8e-04
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = -1

Query: 412 MKMNVQKNTVAGIFHSAEADVKVQGSDSQETDSGKGRLYLIKLRTPSDAEQLEEVLTSNA 233
+KMN+QKNTVA IFH+++A S D+ R YL +L+ +A +L + NA
Sbjct: 258 IKMNLQKNTVASIFHTSDAQ-----SSESAGDTVVARTYLFRLKNVEEATKLSTAIKENA 312

Query: 232 P 230
P
Sbjct: 313 P 313


>tr|A7QKE8|A7QKE8_VITVI Chromosome chr2 scaffold_112, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00001086001
PE=4 SV=1
Length = 420

Score = 42.7 bits (99), Expect = 0.009
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = -1

Query: 418 PNMKMNVQKNTVAGIFHSAEADVKVQGSDSQETDSGKGRLYLIKLRTPSDAEQLEEVLTS 239
P +K N QKN++ IFH++ ++ G+D DS R YLI+ ++ D +L +
Sbjct: 359 PGIKTNPQKNSLVAIFHTSG---EINGNDGGNNDSVVARTYLIRTKSEEDRNKLASAIQE 415

Query: 238 NAP 230
AP
Sbjct: 416 YAP 418


>tr|Q75HB3|Q75HB3_ORYSJ Expressed protein, 5'-partial (Fragment)
OS=Oryza sativa subsp. japonica GN=OSJNBa0056E06.1 PE=4
SV=1
Length = 467

Score = 42.4 bits (98), Expect = 0.012
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Frame = -1

Query: 412 MKMNVQKNTVAGIFHSAEADVKVQGSDSQETDSGK----GRLYLIKLRTPSDAEQLEEVL 245
+KMNV+K+TVA IFH+ SD Q ++SG R YLI+++ A +L +
Sbjct: 410 IKMNVKKSTVASIFHT---------SDGQPSESGSATVVARTYLIRVKNDEAAAKLSAAI 460

Query: 244 TSNAP 230
NAP
Sbjct: 461 MENAP 465


>tr|Q60DL9|Q60DL9_ORYSJ Os03g0667700 protein OS=Oryza sativa subsp.
japonica GN=OSJNBb0036M02.12 PE=4 SV=1
Length = 445

Score = 42.4 bits (98), Expect = 0.012
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Frame = -1

Query: 412 MKMNVQKNTVAGIFHSAEADVKVQGSDSQETDSGK----GRLYLIKLRTPSDAEQLEEVL 245
+KMNV+K+TVA IFH+ SD Q ++SG R YLI+++ A +L +
Sbjct: 388 IKMNVKKSTVASIFHT---------SDGQPSESGSATVVARTYLIRVKNDEAAAKLSAAI 438

Query: 244 TSNAP 230
NAP
Sbjct: 439 MENAP 443


>tr|Q10FH5|Q10FH5_ORYSJ cDNA, clone: J043022O19, full insert
sequence OS=Oryza sativa subsp. japonica
GN=LOC_Os03g46480 PE=2 SV=1
Length = 377

Score = 42.4 bits (98), Expect = 0.012
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Frame = -1

Query: 412 MKMNVQKNTVAGIFHSAEADVKVQGSDSQETDSGK----GRLYLIKLRTPSDAEQLEEVL 245
+KMNV+K+TVA IFH+ SD Q ++SG R YLI+++ A +L +
Sbjct: 320 IKMNVKKSTVASIFHT---------SDGQPSESGSATVVARTYLIRVKNDEAAAKLSAAI 370

Query: 244 TSNAP 230
NAP
Sbjct: 371 MENAP 375


>tr|Q10FH4|Q10FH4_ORYSJ RanBP1 domain containing protein, expressed
OS=Oryza sativa subsp. japonica GN=LOC_Os03g46480 PE=4
SV=1
Length = 360

Score = 42.4 bits (98), Expect = 0.012
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Frame = -1

Query: 412 MKMNVQKNTVAGIFHSAEADVKVQGSDSQETDSGK----GRLYLIKLRTPSDAEQLEEVL 245
+KMNV+K+TVA IFH+ SD Q ++SG R YLI+++ A +L +
Sbjct: 303 IKMNVKKSTVASIFHT---------SDGQPSESGSATVVARTYLIRVKNDEAAAKLSAAI 353

Query: 244 TSNAP 230
NAP
Sbjct: 354 MENAP 358


>tr|B8AP25|B8AP25_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_12927 PE=4 SV=1
Length = 416

Score = 42.4 bits (98), Expect = 0.012
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Frame = -1

Query: 412 MKMNVQKNTVAGIFHSAEADVKVQGSDSQETDSGK----GRLYLIKLRTPSDAEQLEEVL 245
+KMNV+K+TVA IFH+ SD Q ++SG R YLI+++ A +L +
Sbjct: 359 IKMNVKKSTVASIFHT---------SDGQPSESGSATVVARTYLIRVKNDEAAAKLSAAI 409

Query: 244 TSNAP 230
NAP
Sbjct: 410 MENAP 414


>tr|A3AL66|A3AL66_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_011538 PE=4 SV=1
Length = 345

Score = 42.4 bits (98), Expect = 0.012
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Frame = -1

Query: 412 MKMNVQKNTVAGIFHSAEADVKVQGSDSQETDSGK----GRLYLIKLRTPSDAEQLEEVL 245
+KMNV+K+TVA IFH+ SD Q ++SG R YLI+++ A +L +
Sbjct: 288 IKMNVKKSTVASIFHT---------SDGQPSESGSATVVARTYLIRVKNDEAAAKLSAAI 338

Query: 244 TSNAP 230
NAP
Sbjct: 339 MENAP 343


>tr|Q6AC15|Q6AC15_LEIXX Integral membrane protein OS=Leifsonia xyli
subsp. xyli GN=Lxx24530 PE=4 SV=1
Length = 716

Score = 32.7 bits (73), Expect = 9.2
Identities = 18/74 (24%), Positives = 38/74 (51%)
Frame = -2

Query: 234 LQEGSRSSFFSRCKDRTSLKRGFNSEKGICKAASLVVATAYTALLFSVGWPASQMRELHF 55
L G R ++ R ++ +GF + + + AA+L++ + +FS ++ +R + F
Sbjct: 604 LGSGMREAYAHGAPARLAVAKGFRAGRTVVAAAALIMILVFGGFIFS---DSTMIRPIGF 660

Query: 54 ELRFDTLMNSSAAR 13
L F L+++ A R
Sbjct: 661 GLAFGVLVDAFAVR 674