BP913290
Clone id YMU001_000028_F06
Library
Length 519
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000028_F06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ACTGGAAGAATTCGCGGCCGCAGGAATTTTTATTTTTTTTTCCAAATCAATCAGAGCATT
CTAAAATAAAGACAGGGCAGAAAGTCAAGAGTGTNTTAACCCCGAAACTCAAACAATTGC
ATGCACACATATAGGCAATCTTCAAATGCACCCTGCAGGCTCTGAGAGTATATATATATG
ACCCACACCGAACCCTCTTCTTTATTTCACGAACAAGCTATCATAAGAACCACATGGCAG
ACTATGTTAACAACAACTACCACAAGGTGCCGAGCACCACAGCGCAAGCAGAGAACAGCA
TACTTCTCTTGAGCTTGACATACAGTTTACTTGTATAAATGCTGCCCTTCAAAAGCAGAA
AATTTGCCTCAACTTTACCTGACCTGTATCCTGTAATTACATCCCGTTGTTTCAAACAAC
CTAATACTACAAGGGAGTAATTCTTGCTCGTGTAAGGCGAGTGCCGAAGAGATAGATAAA
TCCGTGGACATCAAAATCTACTCAAATTTGCACCCACAC
■■Homology search results ■■ -
sp_hit_id Q6BQR8
Definition sp|Q6BQR8|DPB2_DEBHA DNA polymerase epsilon subunit B OS=Debaryomyces hansenii
Align length 48
Score (bit) 30.0
E-value 5.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913290|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_F06.
(478 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6BQR8|DPB2_DEBHA DNA polymerase epsilon subunit B OS=Debaryo... 30 5.6
sp|Q6PG95|CRML_MOUSE Protein cramped-like OS=Mus musculus GN=Cra... 30 5.6
sp|Q01643|MS84B_DROME Male-specific sperm protein Mst84Db OS=Dro... 29 9.6

>sp|Q6BQR8|DPB2_DEBHA DNA polymerase epsilon subunit B
OS=Debaryomyces hansenii GN=DPB2 PE=3 SV=1
Length = 669

Score = 30.0 bits (66), Expect = 5.6
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
Frame = +1

Query: 130 YIYDPHRT-LFFISRTSYHK-----NHMADYVNNNYHKVPSTTAQAEN 255
Y YD HR L FI T+ + N DY NN YH + ++ EN
Sbjct: 151 YKYDKHRKQLSFIPSTNAKRLANNLNSNVDYFNNRYHLISDRLSRNEN 198


>sp|Q6PG95|CRML_MOUSE Protein cramped-like OS=Mus musculus
GN=Cramp1l PE=2 SV=2
Length = 1285

Score = 30.0 bits (66), Expect = 5.6
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -2

Query: 444 TDLSISSALALHEQELLPCSIRLFET 367
T LS SS ALH+Q LL C +RL T
Sbjct: 730 TALSRSSPSALHQQRLLSCLLRLIST 755


>sp|Q01643|MS84B_DROME Male-specific sperm protein Mst84Db
OS=Drosophila melanogaster GN=Mst84Db PE=2 SV=2
Length = 74

Score = 29.3 bits (64), Expect = 9.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1

Query: 235 CSAPCGSCC*HSLPCG 188
C +PCGSCC PCG
Sbjct: 31 CCSPCGSCCAPCGPCG 46


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913290|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_F06.
(478 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******