BP913291
Clone id YMU001_000028_F07
Library
Length 134
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000028_F07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GCAACTTCTGTCTATCGACCCCTGATAGCTCGCTGCTAGGGTTTTGCGTCGACACTGCAG
TCACAGCTCCTCTCCTTCAAGCTTTCCCCCCTTGTGATCGTGCTGCCATCATCGAAGCTA
TTTGCATAGAGTCA
■■Homology search results ■■ -
sp_hit_id A5V5Q4
Definition sp|A5V5Q4|BIOD_SPHWW Dethiobiotin synthetase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273)
Align length 35
Score (bit) 32.0
E-value 0.98
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913291|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_F07.
(134 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A5V5Q4|BIOD_SPHWW Dethiobiotin synthetase OS=Sphingomonas wit... 32 0.98

>sp|A5V5Q4|BIOD_SPHWW Dethiobiotin synthetase OS=Sphingomonas
wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=bioD
PE=3 SV=1
Length = 209

Score = 32.0 bits (71), Expect = 0.98
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +3

Query: 12 LSTPDSSLLGFCVDTAVTAPLLQAFPPCDRAAIIE 116
L TP S +D V P L A PPCDR +IE
Sbjct: 66 LETPASPHHAAAIDNVVIDPALLAPPPCDRRLVIE 100


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913291|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_F07.
(134 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******