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NBDC - LSDB Archive
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BP913292
Clone id YMU001_000028_F08
Library
Length 541
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000028_F08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TCTCCATATACTCACTCATATCTAACCTGACCATGGCTGACTCAGAACCGAAATAATGTT
CAGCCAATGCTTTGGTGAGTTCAGTCTTCCCCACTCCTGTAGGTCCACAAAACAGCATTG
CAGCAATAGGACGATTTGAATCCTTAAGGCCCACACGCGCTCTGCGAACAGCCTGTGCAA
TTGCACTCACTGAATCATTCTGCCCAACAACCCGGACTCGAAGGCACCTCCTCAAGATTT
ATGAGCTTATTTTGCTCATCAATGGTCAATTGTTCAATTGGAATACCAGACCACATGGAA
GCTACAAATGCAATTTCAGCAGCATCAACTACAACTGGCCCATTCTCAAATTCATCACTG
TTAAGCAGACTTCGCAAGTTGAGAGACGTAGCATCTTGGGCTTCAGAGAGTCCTGTCTCT
ACAATCTCTGAAGCTGAATCCCTACTGCCAGAAGACAATTCTGGTACGACACTTACCTGA
GGAACAAGGACCGATTCCTGGAAAGCCTGGACTGCACGAATTTCTTGCCAGTATTCACTT
G
■■Homology search results ■■ -
sp_hit_id P42762
Definition sp|P42762|ERD1_ARATH ERD1 protein, chloroplastic OS=Arabidopsis thaliana
Align length 68
Score (bit) 112.0
E-value 9.0e-36
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913292|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_F08.
         (541 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P42762|ERD1_ARATH ERD1 protein, chloroplastic OS=Arabidopsis ...   112   9e-36
sp|Q9TM05|CLPC_CYACA ATP-dependent Clp protease ATP-binding subu...   107   3e-30
sp|P31542|CLPAB_SOLLC ATP-dependent Clp protease ATP-binding sub...   103   2e-28
sp|P31541|CLPAA_SOLLC ATP-dependent Clp protease ATP-binding sub...   102   1e-27
sp|P35100|CLPC_PEA ATP-dependent Clp protease ATP-binding subuni...   103   4e-27
sp|O78410|CLPC_GUITH ATP-dependent Clp protease ATP-binding subu...   106   4e-27
sp|Q1XDF4|CLPC_PORYE ATP-dependent Clp protease ATP-binding subu...   105   8e-27
sp|P51332|CLPC_PORPU ATP-dependent Clp protease ATP-binding subu...   105   1e-26
sp|P46523|CLPA_BRANA ATP-dependent Clp protease ATP-binding subu...   101   1e-25
sp|P37571|CLPC_BACSU Negative regulator of genetic competence cl...    97   2e-25
sp|Q8EU05|CLPB_OCEIH Chaperone protein clpB OS=Oceanobacillus ih...    96   4e-25
sp|Q9A9T4|CLPB_CAUCR Chaperone protein clpB OS=Caulobacter cresc...    92   9e-25
sp|Q8DG71|CLPB2_THEEB Chaperone protein clpB 2 OS=Thermosynechoc...    96   3e-24
sp|Q89UL2|CLPB_BRAJA Chaperone protein clpB OS=Bradyrhizobium ja...    99   3e-24
sp|P74361|CLPB2_SYNY3 Chaperone protein clpB 2 OS=Synechocystis ...    94   3e-24
sp|Q8DJ40|CLPB1_THEEB Chaperone protein clpB 1 OS=Thermosynechoc...    95   6e-24
sp|Q8G4X4|CLPB_BIFLO Chaperone protein clpB OS=Bifidobacterium l...    92   2e-23
sp|Q6N1H2|CLPB_RHOPA Chaperone protein clpB OS=Rhodopseudomonas ...    96   2e-23
sp|P53533|CLPB1_SYNE7 Chaperone protein clpB 1 OS=Synechococcus ...    94   2e-23
sp|Q7NFE9|CLPB_GLOVI Chaperone protein clpB OS=Gloeobacter viola...    91   2e-23
sp|Q98G96|CLPB_RHILO Chaperone protein clpB OS=Rhizobium loti GN...    96   2e-23
sp|Q92MK7|CLPB_RHIME Chaperone protein clpB OS=Rhizobium melilot...    96   2e-23
sp|Q7U637|CLPB1_SYNPX Chaperone protein clpB 1 OS=Synechococcus ...    98   2e-23
sp|O67588|CLPB_AQUAE Chaperone protein clpB OS=Aquifex aeolicus ...    94   3e-23
sp|Q7CQ01|CLPB_SALTY Chaperone protein clpB OS=Salmonella typhim...    94   3e-23
sp|Q7AMH5|CLPB_SALTI Chaperone protein clpB OS=Salmonella typhi ...    94   3e-23
sp|Q7N788|CLPB_PHOLL Chaperone protein clpB OS=Photorhabdus lumi...    93   3e-23
sp|Q8CQ88|CLPC_STAES ATP-dependent Clp protease ATP-binding subu...    98   3e-23
sp|Q5HRM8|CLPC_STAEQ ATP-dependent Clp protease ATP-binding subu...    98   3e-23
sp|Q7CU92|CLPB_AGRT5 Chaperone protein clpB OS=Agrobacterium tum...    96   4e-23

>sp|P42762|ERD1_ARATH ERD1 protein, chloroplastic OS=Arabidopsis
           thaliana GN=ERD1 PE=2 SV=1
          Length = 945

 Score =  112 bits (280), Expect(2) = 9e-36
 Identities = 53/68 (77%), Positives = 65/68 (95%)
 Frame = -1

Query: 205 GQNDSVSAIAQAVRRARVGLKDSNRPIAAMLFCGPTGVGKTELTKALAEHYFGSESAMVR 26
           GQ+++V+AI++AV+R+RVGLKD +RPIAAMLFCGPTGVGKTELTKALA +YFGSE +M+R
Sbjct: 631 GQDEAVAAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTKALAANYFGSEESMLR 690

Query: 25  LDMSEYME 2
           LDMSEYME
Sbjct: 691 LDMSEYME 698



 Score = 58.5 bits (140), Expect(2) = 9e-36
 Identities = 37/104 (35%), Positives = 56/104 (53%)
 Frame = -3

Query: 539 SEYWQEIRAVQAFQESVLVPQVSVVPELSSGSRDSASEIVETGLSEAQDATSLNLRSLLN 360
           ++YWQEI+ VQA  E VL  +     +      D + E+VE            +L     
Sbjct: 536 NDYWQEIKTVQAMHEVVLSSRQK--QDDGDAISDESGELVEES----------SLPPAAG 583

Query: 359 SDEFENGPVVVDAAEIAFVASMWSGIPIEQLTIDEQNKLINLEE 228
            DE    P++V   +IA VAS+WSGIP++Q+T DE+  L++LE+
Sbjct: 584 DDE----PILVGPDDIAAVASVWSGIPVQQITADERMLLMSLED 623


>sp|Q9TM05|CLPC_CYACA ATP-dependent Clp protease ATP-binding subunit
           clpA homolog OS=Cyanidium caldarium GN=clpC PE=3 SV=1
          Length = 854

 Score =  107 bits (268), Expect(2) = 3e-30
 Identities = 50/68 (73%), Positives = 62/68 (91%)
 Frame = -1

Query: 205 GQNDSVSAIAQAVRRARVGLKDSNRPIAAMLFCGPTGVGKTELTKALAEHYFGSESAMVR 26
           GQN++V A+++A+RRARVGLK+ NRPIA+ +F GPTGVGKTELTKA+A ++FGSE AMVR
Sbjct: 546 GQNEAVIAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKAMASYFFGSEEAMVR 605

Query: 25  LDMSEYME 2
           LDMSEYME
Sbjct: 606 LDMSEYME 613



 Score = 44.7 bits (104), Expect(2) = 3e-30
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
 Frame = -3

Query: 458 LSSGSRDSASEIVETGLS-EAQDATSLNLRSLLNSDEFENGPVVVDAAEIAFVASMWSGI 282
           + SG  + AS+  E  +  + Q A  +  +     +E    P +V+  +IA + S W+GI
Sbjct: 461 IRSGDFEEASQFREREIEVKVQMAALMKAKKEAIEEELALNPPIVNEDDIANIVSSWTGI 520

Query: 281 PIEQLTIDEQNKLINLEE 228
           P+ +LT  E  KL+++EE
Sbjct: 521 PVSKLTKSESEKLLHMEE 538


>sp|P31542|CLPAB_SOLLC ATP-dependent Clp protease ATP-binding
           subunit clpA homolog CD4B, chloroplastic OS=Solanum
           lycopersicum GN=CD4B PE=3 SV=1
          Length = 923

 Score =  103 bits (257), Expect(2) = 2e-28
 Identities = 48/68 (70%), Positives = 61/68 (89%)
 Frame = -1

Query: 205 GQNDSVSAIAQAVRRARVGLKDSNRPIAAMLFCGPTGVGKTELTKALAEHYFGSESAMVR 26
           GQ+++V AI++A+RRARVGLK+ NRPIA+ +F GPTGVGK+EL KALA +YFGSE AM+R
Sbjct: 610 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 669

Query: 25  LDMSEYME 2
           LDMSE+ME
Sbjct: 670 LDMSEFME 677



 Score = 42.7 bits (99), Expect(2) = 2e-28
 Identities = 18/48 (37%), Positives = 33/48 (68%)
 Frame = -3

Query: 371 SLLNSDEFENGPVVVDAAEIAFVASMWSGIPIEQLTIDEQNKLINLEE 228
           S   S+  + GP+V +A +I  + S W+GIP+E+++ DE ++L+ +EE
Sbjct: 556 SKAESEAADTGPLVTEA-DIQHIVSSWTGIPVEKVSTDESDRLLKMEE 602


>sp|P31541|CLPAA_SOLLC ATP-dependent Clp protease ATP-binding
           subunit clpA homolog CD4A, chloroplastic OS=Solanum
           lycopersicum GN=CD4A PE=3 SV=1
          Length = 926

 Score =  102 bits (254), Expect(2) = 1e-27
 Identities = 47/68 (69%), Positives = 61/68 (89%)
 Frame = -1

Query: 205 GQNDSVSAIAQAVRRARVGLKDSNRPIAAMLFCGPTGVGKTELTKALAEHYFGSESAMVR 26
           GQ+++V AI++A+RRARVGLK+ NRPIA+ +F GPTGVGK+EL K+LA +YFGSE AM+R
Sbjct: 613 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKSLATYYFGSEEAMIR 672

Query: 25  LDMSEYME 2
           LDMSE+ME
Sbjct: 673 LDMSEFME 680



 Score = 41.2 bits (95), Expect(2) = 1e-27
 Identities = 16/38 (42%), Positives = 29/38 (76%)
 Frame = -3

Query: 341 GPVVVDAAEIAFVASMWSGIPIEQLTIDEQNKLINLEE 228
           GP+V +A +I  + S W+GIP+E+++ DE ++L+ +EE
Sbjct: 569 GPIVTEA-DIQHIVSSWTGIPVEKVSTDESDRLLKMEE 605


>sp|P35100|CLPC_PEA ATP-dependent Clp protease ATP-binding subunit
           clpC homolog, chloroplastic OS=Pisum sativum PE=2 SV=1
          Length = 922

 Score =  103 bits (257), Expect(2) = 4e-27
 Identities = 48/68 (70%), Positives = 61/68 (89%)
 Frame = -1

Query: 205 GQNDSVSAIAQAVRRARVGLKDSNRPIAAMLFCGPTGVGKTELTKALAEHYFGSESAMVR 26
           GQ+++V AI++A+RRARVGLK+ NRPIA+ +F GPTGVGK+EL KALA +YFGSE AM+R
Sbjct: 610 GQDEAVQAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 669

Query: 25  LDMSEYME 2
           LDMSE+ME
Sbjct: 670 LDMSEFME 677



 Score = 38.5 bits (88), Expect(2) = 4e-27
 Identities = 14/48 (29%), Positives = 32/48 (66%)
 Frame = -3

Query: 371 SLLNSDEFENGPVVVDAAEIAFVASMWSGIPIEQLTIDEQNKLINLEE 228
           S   ++  + GP+V +  +I  + S W+GIP+++++ DE ++L+ +E+
Sbjct: 556 SKAETETADEGPIVTEV-DIQHIVSSWTGIPVDKVSADESDRLLKMED 602


>sp|O78410|CLPC_GUITH ATP-dependent Clp protease ATP-binding subunit
           clpA homolog OS=Guillardia theta GN=clpC PE=3 SV=1
          Length = 819

 Score =  106 bits (265), Expect(2) = 4e-27
 Identities = 50/68 (73%), Positives = 62/68 (91%)
 Frame = -1

Query: 205 GQNDSVSAIAQAVRRARVGLKDSNRPIAAMLFCGPTGVGKTELTKALAEHYFGSESAMVR 26
           GQ+++V A+++A+RRARVGLK+ NRPIA+ +F GPTGVGKTELTKALA ++FGSE AMVR
Sbjct: 513 GQDEAVVAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEEAMVR 572

Query: 25  LDMSEYME 2
           LDMSEYME
Sbjct: 573 LDMSEYME 580



 Score = 35.4 bits (80), Expect(2) = 4e-27
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = -3

Query: 332 VVDAAEIAFVASMWSGIPIEQLTIDEQNKLINLEE 228
           VV   +IA + + W+GIP+ ++T  E  KL+ +EE
Sbjct: 471 VVTEEDIAQIVAAWTGIPVNKMTRSESEKLLQMEE 505


>sp|Q1XDF4|CLPC_PORYE ATP-dependent Clp protease ATP-binding subunit
           clpA homolog OS=Porphyra yezoensis GN=clpC PE=3 SV=1
          Length = 821

 Score =  105 bits (262), Expect(2) = 8e-27
 Identities = 48/68 (70%), Positives = 63/68 (92%)
 Frame = -1

Query: 205 GQNDSVSAIAQAVRRARVGLKDSNRPIAAMLFCGPTGVGKTELTKALAEHYFGSESAMVR 26
           GQ+++V A+++A+RRARVGLK+ NRPIA+ +F GPTGVGKTELTKALA ++FGSE++M+R
Sbjct: 516 GQDEAVVAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEASMIR 575

Query: 25  LDMSEYME 2
           LDMSEYME
Sbjct: 576 LDMSEYME 583



 Score = 35.4 bits (80), Expect(2) = 8e-27
 Identities = 15/35 (42%), Positives = 24/35 (68%)
 Frame = -3

Query: 332 VVDAAEIAFVASMWSGIPIEQLTIDEQNKLINLEE 228
           VV   +IA + + W+GIP+ +LT  E  KL+++EE
Sbjct: 474 VVTEDDIAEIVAAWTGIPVTKLTKSESEKLMHMEE 508


>sp|P51332|CLPC_PORPU ATP-dependent Clp protease ATP-binding subunit
           clpA homolog OS=Porphyra purpurea GN=clpC PE=3 SV=1
          Length = 821

 Score =  105 bits (262), Expect(2) = 1e-26
 Identities = 48/68 (70%), Positives = 63/68 (92%)
 Frame = -1

Query: 205 GQNDSVSAIAQAVRRARVGLKDSNRPIAAMLFCGPTGVGKTELTKALAEHYFGSESAMVR 26
           GQ+++V A+++A+RRARVGLK+ NRPIA+ +F GPTGVGKTELTKALA ++FGSE++M+R
Sbjct: 516 GQDEAVIAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELTKALASYFFGSEASMIR 575

Query: 25  LDMSEYME 2
           LDMSEYME
Sbjct: 576 LDMSEYME 583



 Score = 35.0 bits (79), Expect(2) = 1e-26
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = -3

Query: 332 VVDAAEIAFVASMWSGIPIEQLTIDEQNKLINLEE 228
           VV   +IA + + W+GIP+ +LT  E  KL+ +EE
Sbjct: 474 VVTEDDIAEIVAAWTGIPVTKLTKSESEKLMQMEE 508


>sp|P46523|CLPA_BRANA ATP-dependent Clp protease ATP-binding subunit
           clpA homolog, chloroplastic (Fragment) OS=Brassica napus
           GN=CLPA PE=2 SV=1
          Length = 874

 Score =  101 bits (251), Expect(2) = 1e-25
 Identities = 47/68 (69%), Positives = 60/68 (88%)
 Frame = -1

Query: 205 GQNDSVSAIAQAVRRARVGLKDSNRPIAAMLFCGPTGVGKTELTKALAEHYFGSESAMVR 26
           GQ+++V AI++A+RRARVGLK+ NRPIA+ +F GPTGVGK+EL KALA +YFG E AM+R
Sbjct: 558 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFFGPTGVGKSELAKALAAYYFGCEEAMIR 617

Query: 25  LDMSEYME 2
           LDMSE+ME
Sbjct: 618 LDMSEFME 625



 Score = 35.8 bits (81), Expect(2) = 1e-25
 Identities = 16/48 (33%), Positives = 31/48 (64%)
 Frame = -3

Query: 371 SLLNSDEFENGPVVVDAAEIAFVASMWSGIPIEQLTIDEQNKLINLEE 228
           S   S+  + GP+V ++ +I  + S W+GI +E+++ DE + L+ +EE
Sbjct: 504 SKAESETGDEGPMVTES-DIQHIVSSWTGILVEKVSTDESDLLLKMEE 550


>sp|P37571|CLPC_BACSU Negative regulator of genetic competence
           clpC/mecB OS=Bacillus subtilis GN=clpC PE=3 SV=1
          Length = 810

 Score = 97.1 bits (240), Expect(2) = 2e-25
 Identities = 45/68 (66%), Positives = 56/68 (82%)
 Frame = -1

Query: 205 GQNDSVSAIAQAVRRARVGLKDSNRPIAAMLFCGPTGVGKTELTKALAEHYFGSESAMVR 26
           GQ+++V A+A+AVRRAR GLKD  RPI + +F GPTGVGKTEL +ALAE  FG E +M+R
Sbjct: 512 GQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEESMIR 571

Query: 25  LDMSEYME 2
           +DMSEYME
Sbjct: 572 IDMSEYME 579



 Score = 39.3 bits (90), Expect(2) = 2e-25
 Identities = 17/41 (41%), Positives = 27/41 (65%)
 Frame = -3

Query: 347 ENGPVVVDAAEIAFVASMWSGIPIEQLTIDEQNKLINLEEV 225
           EN  V VD  +IA V S W+G+P+ ++   E +KL+N+E +
Sbjct: 467 ENSEVTVD--DIAMVVSSWTGVPVSKIAQTETDKLLNMENI 505
tr_hit_id A9RTE5
Definition tr|A9RTE5|A9RTE5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 68
Score (bit) 122.0
E-value 3.0e-44
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913292|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_F08.
         (541 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RTE5|A9RTE5_PHYPA Predicted protein OS=Physcomitrella paten...   122   3e-44
tr|A9RDJ6|A9RDJ6_PHYPA Predicted protein OS=Physcomitrella paten...   122   5e-42
tr|A5B4Z4|A5B4Z4_VITVI Putative uncharacterized protein OS=Vitis...   111   4e-37
tr|A7P2B2|A7P2B2_VITVI Chromosome chr19 scaffold_4, whole genome...   111   4e-37
tr|Q6H795|Q6H795_ORYSJ Os02g0526400 protein OS=Oryza sativa subs...   110   7e-36
tr|A3A7I6|A3A7I6_ORYSJ Putative uncharacterized protein OS=Oryza...   110   7e-36
tr|Q8GT62|Q8GT62_ORYSI ATP-dependent Clp protease ATP-binding su...   110   2e-35
tr|A2X5I8|A2X5I8_ORYSI Putative uncharacterized protein OS=Oryza...   110   2e-35
tr|B8ATH4|B8ATH4_ORYSI Putative uncharacterized protein OS=Oryza...   108   4e-35
tr|Q01L44|Q01L44_ORYSA H0502B11.7 protein OS=Oryza sativa GN=H05...   108   4e-35
tr|A3ATJ7|A3ATJ7_ORYSJ Putative uncharacterized protein OS=Oryza...   101   3e-33
tr|A5GS32|A5GS32_SYNR3 ATP-dependent Clp protease ATP-binding su...   105   3e-29
tr|A3IMB6|A3IMB6_9CHRO ATP-dependent Clp protease regulatory sub...   107   1e-28
tr|B1XLJ5|B1XLJ5_SYNP2 Endopeptidase Clp, ATP-binding chain C, p...   105   1e-28
tr|Q55662|Q55662_SYNY3 ATP-dependent Clp protease regulatory sub...   106   2e-28
tr|B1WSL6|B1WSL6_CYAA5 ATP-dependent Clp protease, regulatory su...   107   2e-28
tr|B0JJ69|B0JJ69_MICAN ATP-dependent Clp protease ATPase subunit...   107   3e-28
tr|A8YK80|A8YK80_MICAE ClpC protein OS=Microcystis aeruginosa PC...   107   3e-28
tr|B7K4L1|B7K4L1_SYNP8 ATPase AAA-2 domain protein OS=Synechococ...   107   4e-28
tr|B4C1W6|B4C1W6_9CHRO ATPase AAA-2 domain protein OS=Cyanothece...   107   4e-28
tr|A3Z1M8|A3Z1M8_9SYNE Endopeptidase Clp ATP-binding chain C OS=...   105   5e-28
tr|Q31AD7|Q31AD7_PROM9 ATPase OS=Prochlorococcus marinus (strain...   104   5e-28
tr|Q05ZQ3|Q05ZQ3_9SYNE ATPase OS=Synechococcus sp. BL107 GN=BL10...   105   6e-28
tr|Q112C2|Q112C2_TRIEI ATPase AAA-2 OS=Trichodesmium erythraeum ...   105   6e-28
tr|Q3AX87|Q3AX87_SYNS9 ATPase OS=Synechococcus sp. (strain CC990...   105   1e-27
tr|Q85G08|Q85G08_CYAME ATP-dependent clp protease ATP-binding su...   108   1e-27
tr|Q7U7P3|Q7U7P3_SYNPX Endopeptidase Clp ATP-binding chain C OS=...   105   2e-27
tr|Q3AJ56|Q3AJ56_SYNSC ATPase OS=Synechococcus sp. (strain CC960...   105   2e-27
tr|Q4C8M5|Q4C8M5_CROWT UvrB/UvrC protein:AAA ATPase, central reg...   106   2e-27
tr|Q0IBD3|Q0IBD3_SYNS3 Putative Clp protease, ATP-binding subuni...   105   2e-27

>tr|A9RTE5|A9RTE5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_177939 PE=3 SV=1
          Length = 974

 Score =  122 bits (307), Expect(2) = 3e-44
 Identities = 58/68 (85%), Positives = 66/68 (97%)
 Frame = -1

Query: 205 GQNDSVSAIAQAVRRARVGLKDSNRPIAAMLFCGPTGVGKTELTKALAEHYFGSESAMVR 26
           GQ+D+V+AI++AVRRARVGLKD NRPIAAMLFCGPTGVGKTELTKALA+HYFGSE +M+R
Sbjct: 648 GQDDAVNAISRAVRRARVGLKDPNRPIAAMLFCGPTGVGKTELTKALAQHYFGSEESMIR 707

Query: 25  LDMSEYME 2
           LDMSEYME
Sbjct: 708 LDMSEYME 715



 Score = 80.1 bits (196), Expect(2) = 3e-44
 Identities = 51/104 (49%), Positives = 63/104 (60%)
 Frame = -3

Query: 539 SEYWQEIRAVQAFQESVLVPQVSVVPELSSGSRDSASEIVETGLSEAQDATSLNLRSLLN 360
           SE WQEIRAVQA +  VL    S +    S   D  +E +    ++A DA      S+++
Sbjct: 546 SEIWQEIRAVQASEADVLTGDPSSLSTTESRIGDMDNESLSVPDNDALDA------SIVS 599

Query: 359 SDEFENGPVVVDAAEIAFVASMWSGIPIEQLTIDEQNKLINLEE 228
            DE    PVVV   EIA VASMWSGIP+EQLT DEQ KL+NLE+
Sbjct: 600 DDE---EPVVVGPGEIAAVASMWSGIPVEQLTSDEQMKLMNLEK 640


>tr|A9RDJ6|A9RDJ6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_112168 PE=3 SV=1
          Length = 881

 Score =  122 bits (307), Expect(2) = 5e-42
 Identities = 58/68 (85%), Positives = 66/68 (97%)
 Frame = -1

Query: 205 GQNDSVSAIAQAVRRARVGLKDSNRPIAAMLFCGPTGVGKTELTKALAEHYFGSESAMVR 26
           GQ+D+V+AI++AVRRARVGLKD NRPIAAMLFCGPTGVGKTELTKALA+HYFGSE +M+R
Sbjct: 555 GQDDAVNAISRAVRRARVGLKDPNRPIAAMLFCGPTGVGKTELTKALAQHYFGSEESMIR 614

Query: 25  LDMSEYME 2
           LDMSEYME
Sbjct: 615 LDMSEYME 622



 Score = 72.8 bits (177), Expect(2) = 5e-42
 Identities = 50/105 (47%), Positives = 61/105 (58%)
 Frame = -3

Query: 539 SEYWQEIRAVQAFQESVLVPQVSVVPELSSGSRDSASEIVETGLSEAQDATSLNLRSLLN 360
           SEYW+EIRAVQA QESV      + P    G       I+   +S + DA   +L     
Sbjct: 460 SEYWREIRAVQASQESVSSFSYRINP---CGYFSRLGSIL-VSVSGSTDAPGEDL----- 510

Query: 359 SDEFENGPVVVDAAEIAFVASMWSGIPIEQLTIDEQNKLINLEEV 225
                  PVVV  +EIA VASMWSGIP+EQLT DEQ KL+NLE++
Sbjct: 511 -------PVVVGPSEIAAVASMWSGIPVEQLTNDEQIKLMNLEKL 548


>tr|A5B4Z4|A5B4Z4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_012383 PE=3 SV=1
          Length = 946

 Score =  111 bits (278), Expect(2) = 4e-37
 Identities = 53/68 (77%), Positives = 64/68 (94%)
 Frame = -1

Query: 205 GQNDSVSAIAQAVRRARVGLKDSNRPIAAMLFCGPTGVGKTELTKALAEHYFGSESAMVR 26
           GQ++++++I++AV+R+RVGLKD NRPIAAMLFCGPTGVGKTEL KALA  YFGSE+AMVR
Sbjct: 632 GQDNAIASISRAVKRSRVGLKDPNRPIAAMLFCGPTGVGKTELAKALAACYFGSEAAMVR 691

Query: 25  LDMSEYME 2
           LDMSEYME
Sbjct: 692 LDMSEYME 699



 Score = 67.4 bits (163), Expect(2) = 4e-37
 Identities = 39/103 (37%), Positives = 56/103 (54%)
 Frame = -3

Query: 536 EYWQEIRAVQAFQESVLVPQVSVVPELSSGSRDSASEIVETGLSEAQDATSLNLRSLLNS 357
           +YWQEIRAV+A  E V+  ++                    G S  +D +++   S L S
Sbjct: 538 DYWQEIRAVKAMHEMVMASKLKNC----------------NGASCMEDGSTVLFESPLPS 581

Query: 356 DEFENGPVVVDAAEIAFVASMWSGIPIEQLTIDEQNKLINLEE 228
              +N P+VV   EIA VAS+WSGIP++Q+T DE+  L+ L E
Sbjct: 582 MSDDNEPIVVGPNEIAVVASLWSGIPVQQITADERMLLVGLHE 624


>tr|A7P2B2|A7P2B2_VITVI Chromosome chr19 scaffold_4, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00027951001
           PE=3 SV=1
          Length = 934

 Score =  111 bits (278), Expect(2) = 4e-37
 Identities = 53/68 (77%), Positives = 64/68 (94%)
 Frame = -1

Query: 205 GQNDSVSAIAQAVRRARVGLKDSNRPIAAMLFCGPTGVGKTELTKALAEHYFGSESAMVR 26
           GQ++++++I++AV+R+RVGLKD NRPIAAMLFCGPTGVGKTEL KALA  YFGSE+AMVR
Sbjct: 620 GQDNAIASISRAVKRSRVGLKDPNRPIAAMLFCGPTGVGKTELAKALAACYFGSEAAMVR 679

Query: 25  LDMSEYME 2
           LDMSEYME
Sbjct: 680 LDMSEYME 687



 Score = 67.4 bits (163), Expect(2) = 4e-37
 Identities = 39/103 (37%), Positives = 56/103 (54%)
 Frame = -3

Query: 536 EYWQEIRAVQAFQESVLVPQVSVVPELSSGSRDSASEIVETGLSEAQDATSLNLRSLLNS 357
           +YWQEIRAV+A  E V+  ++                    G S  +D +++   S L S
Sbjct: 526 DYWQEIRAVKAMHEMVMASKLKNC----------------NGASCMEDGSTVLFESPLPS 569

Query: 356 DEFENGPVVVDAAEIAFVASMWSGIPIEQLTIDEQNKLINLEE 228
              +N P+VV   EIA VAS+WSGIP++Q+T DE+  L+ L E
Sbjct: 570 MSDDNEPIVVGPNEIAVVASLWSGIPVQQITADERMLLVGLHE 612


>tr|Q6H795|Q6H795_ORYSJ Os02g0526400 protein OS=Oryza sativa subsp.
           japonica GN=P0458B05.10 PE=3 SV=1
          Length = 938

 Score =  110 bits (275), Expect(2) = 7e-36
 Identities = 53/68 (77%), Positives = 62/68 (91%)
 Frame = -1

Query: 205 GQNDSVSAIAQAVRRARVGLKDSNRPIAAMLFCGPTGVGKTELTKALAEHYFGSESAMVR 26
           GQ+D+V AI++AV+R+RVGL D +RPIA +LFCGPTGVGKTELTKALA  YFGSESAM+R
Sbjct: 627 GQDDAVMAISRAVKRSRVGLNDPDRPIATLLFCGPTGVGKTELTKALAASYFGSESAMLR 686

Query: 25  LDMSEYME 2
           LDMSEYME
Sbjct: 687 LDMSEYME 694



 Score = 64.3 bits (155), Expect(2) = 7e-36
 Identities = 40/102 (39%), Positives = 54/102 (52%)
 Frame = -3

Query: 536 EYWQEIRAVQAFQESVLVPQVSVVPELSSGSRDSASEIVETGLSEAQDATSLNLRSLLNS 357
           EYWQEIRA Q   E V   Q+   P   +GS              A  A S ++  L + 
Sbjct: 531 EYWQEIRAAQNMHEVVSSNQMKYSPRQENGSA-------------AIKAPSEDMNELTSE 577

Query: 356 DEFENGPVVVDAAEIAFVASMWSGIPIEQLTIDEQNKLINLE 231
            + E  P+VV   EIA VAS+WSGIP++QLT D++  L+ L+
Sbjct: 578 LQVEE-PIVVGTEEIARVASLWSGIPVQQLTADDRKLLVGLD 618


>tr|A3A7I6|A3A7I6_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_006758 PE=3 SV=1
          Length = 784

 Score =  110 bits (275), Expect(2) = 7e-36
 Identities = 53/68 (77%), Positives = 62/68 (91%)
 Frame = -1

Query: 205 GQNDSVSAIAQAVRRARVGLKDSNRPIAAMLFCGPTGVGKTELTKALAEHYFGSESAMVR 26
           GQ+D+V AI++AV+R+RVGL D +RPIA +LFCGPTGVGKTELTKALA  YFGSESAM+R
Sbjct: 473 GQDDAVMAISRAVKRSRVGLNDPDRPIATLLFCGPTGVGKTELTKALAASYFGSESAMLR 532

Query: 25  LDMSEYME 2
           LDMSEYME
Sbjct: 533 LDMSEYME 540



 Score = 64.3 bits (155), Expect(2) = 7e-36
 Identities = 40/102 (39%), Positives = 54/102 (52%)
 Frame = -3

Query: 536 EYWQEIRAVQAFQESVLVPQVSVVPELSSGSRDSASEIVETGLSEAQDATSLNLRSLLNS 357
           EYWQEIRA Q   E V   Q+   P   +GS              A  A S ++  L + 
Sbjct: 377 EYWQEIRAAQNMHEVVSSNQMKYSPRQENGSA-------------AIKAPSEDMNELTSE 423

Query: 356 DEFENGPVVVDAAEIAFVASMWSGIPIEQLTIDEQNKLINLE 231
            + E  P+VV   EIA VAS+WSGIP++QLT D++  L+ L+
Sbjct: 424 LQVEE-PIVVGTEEIARVASLWSGIPVQQLTADDRKLLVGLD 464


>tr|Q8GT62|Q8GT62_ORYSI ATP-dependent Clp protease ATP-binding
           subunit OS=Oryza sativa subsp. indica GN=CLPD1 PE=1 SV=1
          Length = 938

 Score =  110 bits (275), Expect(2) = 2e-35
 Identities = 53/68 (77%), Positives = 62/68 (91%)
 Frame = -1

Query: 205 GQNDSVSAIAQAVRRARVGLKDSNRPIAAMLFCGPTGVGKTELTKALAEHYFGSESAMVR 26
           GQ+D+V AI++AV+R+RVGL D +RPIA +LFCGPTGVGKTELTKALA  YFGSESAM+R
Sbjct: 627 GQDDAVMAISRAVKRSRVGLNDPDRPIATLLFCGPTGVGKTELTKALAASYFGSESAMLR 686

Query: 25  LDMSEYME 2
           LDMSEYME
Sbjct: 687 LDMSEYME 694



 Score = 62.8 bits (151), Expect(2) = 2e-35
 Identities = 40/102 (39%), Positives = 54/102 (52%)
 Frame = -3

Query: 536 EYWQEIRAVQAFQESVLVPQVSVVPELSSGSRDSASEIVETGLSEAQDATSLNLRSLLNS 357
           EYWQEIRA Q   E V   Q+   P   +GS              A  A S ++  L + 
Sbjct: 531 EYWQEIRAAQNMHEVVSSNQMKYSPCQENGSA-------------AIKAPSEDMNELTSE 577

Query: 356 DEFENGPVVVDAAEIAFVASMWSGIPIEQLTIDEQNKLINLE 231
            + E  P+VV   EIA VAS+WSGIP++QLT D++  L+ L+
Sbjct: 578 LQVEE-PIVVGTEEIARVASLWSGIPVQQLTADDRKLLVGLD 618


>tr|A2X5I8|A2X5I8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_07468 PE=3 SV=1
          Length = 889

 Score =  110 bits (275), Expect(2) = 2e-35
 Identities = 53/68 (77%), Positives = 62/68 (91%)
 Frame = -1

Query: 205 GQNDSVSAIAQAVRRARVGLKDSNRPIAAMLFCGPTGVGKTELTKALAEHYFGSESAMVR 26
           GQ+D+V AI++AV+R+RVGL D +RPIA +LFCGPTGVGKTELTKALA  YFGSESAM+R
Sbjct: 578 GQDDAVMAISRAVKRSRVGLNDPDRPIATLLFCGPTGVGKTELTKALAASYFGSESAMLR 637

Query: 25  LDMSEYME 2
           LDMSEYME
Sbjct: 638 LDMSEYME 645



 Score = 62.8 bits (151), Expect(2) = 2e-35
 Identities = 40/102 (39%), Positives = 54/102 (52%)
 Frame = -3

Query: 536 EYWQEIRAVQAFQESVLVPQVSVVPELSSGSRDSASEIVETGLSEAQDATSLNLRSLLNS 357
           EYWQEIRA Q   E V   Q+   P   +GS              A  A S ++  L + 
Sbjct: 482 EYWQEIRAAQNMHEVVSSNQMKYSPCQENGSA-------------AIKAPSEDMNELTSE 528

Query: 356 DEFENGPVVVDAAEIAFVASMWSGIPIEQLTIDEQNKLINLE 231
            + E  P+VV   EIA VAS+WSGIP++QLT D++  L+ L+
Sbjct: 529 LQVEE-PIVVGTEEIARVASLWSGIPVQQLTADDRKLLVGLD 569


>tr|B8ATH4|B8ATH4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_15769 PE=4 SV=1
          Length = 956

 Score =  108 bits (269), Expect(2) = 4e-35
 Identities = 52/68 (76%), Positives = 61/68 (89%)
 Frame = -1

Query: 205 GQNDSVSAIAQAVRRARVGLKDSNRPIAAMLFCGPTGVGKTELTKALAEHYFGSESAMVR 26
           GQ+D+V AI++AV+R+RVGL D +RPIA ++FCGPTGVGKTELTKALA  YFGSESA VR
Sbjct: 625 GQDDAVLAISKAVKRSRVGLNDPDRPIATLIFCGPTGVGKTELTKALAASYFGSESATVR 684

Query: 25  LDMSEYME 2
           LDMSEYME
Sbjct: 685 LDMSEYME 692



 Score = 64.3 bits (155), Expect(2) = 4e-35
 Identities = 38/103 (36%), Positives = 57/103 (55%)
 Frame = -3

Query: 536 EYWQEIRAVQAFQESVLVPQVSVVPELSSGSRDSASEIVETGLSEAQDATSLNLRSLLNS 357
           EYWQEIRAVQ   E  L  +V     L+   ++ A +I   G  +   A+ L+  +    
Sbjct: 525 EYWQEIRAVQNMHEVALTNKVKY--SLNQNDQEDAVDIELVGEDKTSPASMLSTST---- 578

Query: 356 DEFENGPVVVDAAEIAFVASMWSGIPIEQLTIDEQNKLINLEE 228
               + P +V + EIA V S+WSGIP++QLT DE+  L+ L++
Sbjct: 579 ----DKPSLVGSEEIARVTSLWSGIPVQQLTADERKLLVGLDD 617


>tr|Q01L44|Q01L44_ORYSA H0502B11.7 protein OS=Oryza sativa
           GN=H0502B11.7 PE=3 SV=1
          Length = 937

 Score =  108 bits (269), Expect(2) = 4e-35
 Identities = 52/68 (76%), Positives = 61/68 (89%)
 Frame = -1

Query: 205 GQNDSVSAIAQAVRRARVGLKDSNRPIAAMLFCGPTGVGKTELTKALAEHYFGSESAMVR 26
           GQ+D+V AI++AV+R+RVGL D +RPIA ++FCGPTGVGKTELTKALA  YFGSESA VR
Sbjct: 625 GQDDAVLAISKAVKRSRVGLNDPDRPIATLIFCGPTGVGKTELTKALAASYFGSESATVR 684

Query: 25  LDMSEYME 2
           LDMSEYME
Sbjct: 685 LDMSEYME 692



 Score = 64.3 bits (155), Expect(2) = 4e-35
 Identities = 38/103 (36%), Positives = 57/103 (55%)
 Frame = -3

Query: 536 EYWQEIRAVQAFQESVLVPQVSVVPELSSGSRDSASEIVETGLSEAQDATSLNLRSLLNS 357
           EYWQEIRAVQ   E  L  +V     L+   ++ A +I   G  +   A+ L+  +    
Sbjct: 525 EYWQEIRAVQNMHEVALTNKVKY--SLNQNDQEDAVDIELVGEDKTSPASMLSTST---- 578

Query: 356 DEFENGPVVVDAAEIAFVASMWSGIPIEQLTIDEQNKLINLEE 228
               + P +V + EIA V S+WSGIP++QLT DE+  L+ L++
Sbjct: 579 ----DKPSLVGSEEIARVTSLWSGIPVQQLTADERKLLVGLDD 617