BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913298|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_G02.
         (517 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O39928|POLG_HCVEV Genome polyprotein OS=Hepatitis C virus gen...    30   5.2  
sp|Q7MH01|MUTL_VIBVY DNA mismatch repair protein mutL OS=Vibrio ...    30   6.8  
sp|Q8DCV0|MUTL_VIBVU DNA mismatch repair protein mutL OS=Vibrio ...    30   6.8  
sp|Q9DHK3|TRDH_YLDV Transcript release DNA helicase OS=Yaba-like...    30   8.7  

>sp|O39928|POLG_HCVEV Genome polyprotein OS=Hepatitis C virus genotype
            5a (isolate EUH1480) PE=3 SV=3
          Length = 3014

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -1

Query: 508  PVPSPSQRRTPNSPLDSEQSQVLSDYISFSYEVD 407
            PVP P ++R P    DS  SQV++D     ++VD
Sbjct: 2324 PVPLPRRKRKPMELSDSTVSQVMADLADARFKVD 2357


>sp|Q7MH01|MUTL_VIBVY DNA mismatch repair protein mutL OS=Vibrio
           vulnificus (strain YJ016) GN=mutL PE=3 SV=1
          Length = 664

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -2

Query: 288 SRMSEVLKRQSNDTFETKVLALHGGILCSAQKGMYGRLEANKLLANVC 145
           + + E+LKR +   F+  +   H G +    +  +  L+A K LA VC
Sbjct: 169 AHIDELLKRIALSRFDVSITLRHNGKVIRQYRAAHNDLQAEKRLATVC 216


>sp|Q8DCV0|MUTL_VIBVU DNA mismatch repair protein mutL OS=Vibrio
           vulnificus GN=mutL PE=3 SV=1
          Length = 664

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -2

Query: 288 SRMSEVLKRQSNDTFETKVLALHGGILCSAQKGMYGRLEANKLLANVC 145
           + + E+LKR +   F+  +   H G +    +  +  L+A K LA VC
Sbjct: 169 AHIDELLKRIALSCFDVSITLRHNGKVIRQYRAAHNDLQAEKRLATVC 216


>sp|Q9DHK3|TRDH_YLDV Transcript release DNA helicase OS=Yaba-like
           disease virus GN=110R PE=3 SV=1
          Length = 479

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = -3

Query: 254 MILSRQKYLRCMGASYVVLRKGCMVDWRLTNCWLMSVVRSPLLICVFLPN 105
           ++LS +K  +    +Y+ L   C     +T+C+L+S+ +   +IC  LPN
Sbjct: 92  VLLSMEKKNKHKRPTYITLHLACGFGKTITSCYLLSLHKKKAVIC--LPN 139

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913298|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_G02.
         (517 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******