BP913301
Clone id YMU001_000028_G05
Library
Length 482
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000028_G05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TCATGCCCTAGCAAGTGCGTGTGAGAGAGACGACACTGTCTTTTGAACCTAAACCCTGGA
TCTGATGCTGTTGGGCAGTATTCCGTAGCTTCAGGAGGTCATTTACCTAGACACCTCAAG
ATGGAACAGATTCTTTCTAGATCATCCCTATGGCATATTTCATGCAGAGCTCCACTTTAT
GTGAGGTATGGTAGAACTATGGGTTCTCAAGCTGTTGGTGTACAGGAGGTGGAAGCCGAT
GACACTAAATACCGGCGATGGCAGGCAGATGAGACTAAGATACTCATTAAGGCAAAAAAA
CAGTATTGTCTGGGGAAATTGGAACAAAGAGAGACATTTTGGGCTCAACTGAAGAAGGCT
ATAAGCGATTGGAAGGACATGGAGACTATGATACTCGTTGCGGCAAGAGCCCAGGATTAT
CTGGAGAACTTGGAACGCAGAGAAACATTTGGGGCTGAACTGAAGAAGTTTAATATCAAT
TG
■■Homology search results ■■ -
sp_hit_id Q9KDV2
Definition sp|Q9KDV2|GALT_BACHD Galactose-1-phosphate uridylyltransferase OS=Bacillus halodurans
Align length 88
Score (bit) 32.3
E-value 1.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913301|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_G05.
(482 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9KDV2|GALT_BACHD Galactose-1-phosphate uridylyltransferase O... 32 1.2
sp|Q9FGR8|FBD19_ARATH Putative FBD-associated F-box protein At5g... 32 2.0
sp|Q460N5|PAR14_HUMAN Poly [ADP-ribose] polymerase 14 OS=Homo sa... 31 2.6
sp|Q62925|M3K1_RAT Mitogen-activated protein kinase kinase kinas... 31 2.6
sp|P53349|M3K1_MOUSE Mitogen-activated protein kinase kinase kin... 31 2.6
sp|Q9YHY9|OTC_CHICK Ornithine carbamoyltransferase, mitochondria... 31 3.4
sp|B4MQL8|EIF3B_DROWI Eukaryotic translation initiation factor 3... 30 4.4
sp|B3ME25|EIF3B_DROAN Eukaryotic translation initiation factor 3... 30 4.4
sp|Q54E36|XPO2_DICDI Exportin-2 OS=Dictyostelium discoideum GN=x... 30 5.7
sp|Q9YGN1|SAND_FUGRU Protein SAND OS=Fugu rubripes GN=sand PE=3 ... 30 5.7
sp|B4LM71|EIF3B_DROVI Eukaryotic translation initiation factor 3... 29 9.8
sp|B4KNN9|EIF3B_DROMO Eukaryotic translation initiation factor 3... 29 9.8

>sp|Q9KDV2|GALT_BACHD Galactose-1-phosphate uridylyltransferase
OS=Bacillus halodurans GN=galT PE=3 SV=1
Length = 508

Score = 32.3 bits (72), Expect = 1.2
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 11/88 (12%)
Frame = +2

Query: 119 RWNRFFLDHPYGIF--HAELHFM----*GMVELWVLKLLVYRRWKPM-----TLNTGDGR 265
R NR +HP GIF H E+H + G++E+ L +L R + + L + D R
Sbjct: 377 RNNRTSKEHPDGIFHPHQEVHHIKKENIGLIEVMGLAVLPGRLKEELELLAEALLSSDPR 436

Query: 266 QMRLRYSLRQKNSIVWGNWNKERHFGLN 349
Q+ RY QK+ W KERH L+
Sbjct: 437 QVIARYEQIQKHE-AWALAIKERHAHLH 463


>sp|Q9FGR8|FBD19_ARATH Putative FBD-associated F-box protein
At5g50270 OS=Arabidopsis thaliana GN=At5g50270 PE=4 SV=1
Length = 423

Score = 31.6 bits (70), Expect = 2.0
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Frame = -3

Query: 432 QVLQIILGSCRNEYHSLHVLPIAYSLLQLSPKCLSL------FQFPQTILFFCLNEYLSL 271
+++ I L +C +E+ L + LL+ SPK +SL FQF Q +++ + L
Sbjct: 300 RLVHITLCTCDDEW-----LNLLACLLKGSPKLISLKLEKVIFQFIQCLMYRLSQHHGHL 354

Query: 270 ICLPSPV 250
IC PSP+
Sbjct: 355 ICSPSPL 361


>sp|Q460N5|PAR14_HUMAN Poly [ADP-ribose] polymerase 14 OS=Homo
sapiens GN=PARP14 PE=2 SV=2
Length = 1720

Score = 31.2 bits (69), Expect = 2.6
Identities = 13/63 (20%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = +1

Query: 247 KYRRWQADETKILIKAKKQYCLGKLEQRETFWAQLKKAISD------WKDMETMILVAAR 408
+ + WQAD + L + +Y + ++ T W +K + D + ++ M+++A +
Sbjct: 298 RIKTWQADTSTTLSSIRSKYKVNPIKVDPTMWDTIKNDVKDDRILIEFDTLKEMVILAGK 357

Query: 409 AQD 417
++D
Sbjct: 358 SED 360


>sp|Q62925|M3K1_RAT Mitogen-activated protein kinase kinase kinase 1
OS=Rattus norvegicus GN=Map3k1 PE=1 SV=1
Length = 1493

Score = 31.2 bits (69), Expect = 2.6
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -2

Query: 424 PDNPGLLPQRVS*SPCPSNRL*PSSVEPKMSLFVPISPDNT 302
P++PG+ +RVS P S R+ P P F P SP+ T
Sbjct: 254 PESPGVRRKRVSPVPFQSGRITPPRRAPSPDGFSPYSPEET 294


>sp|P53349|M3K1_MOUSE Mitogen-activated protein kinase kinase kinase
1 OS=Mus musculus GN=Map3k1 PE=1 SV=3
Length = 1493

Score = 31.2 bits (69), Expect = 2.6
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -2

Query: 424 PDNPGLLPQRVS*SPCPSNRL*PSSVEPKMSLFVPISPDNT 302
P++PG+ +RVS P S R+ P P F P SP+ T
Sbjct: 259 PESPGVRRKRVSPVPFQSGRITPPRRAPSPDGFSPYSPEET 299


>sp|Q9YHY9|OTC_CHICK Ornithine carbamoyltransferase, mitochondrial
OS=Gallus gallus GN=OTC PE=1 SV=1
Length = 354

Score = 30.8 bits (68), Expect = 3.4
Identities = 21/69 (30%), Positives = 26/69 (37%)
Frame = +1

Query: 100 HLPRHLKMEQILSRSSLWHISCRAPLYVRYGRTMGSQAVGVQEVEADDTKYRRWQADETK 279
HLPRH CR P G + +Q AD+ KY W A + K
Sbjct: 20 HLPRHF---------------CRGPPNQMNVCLKGRDLLTLQNYTADELKYLLWVASDLK 64

Query: 280 ILIKAKKQY 306
IK K +Y
Sbjct: 65 QRIKDKGEY 73


>sp|B4MQL8|EIF3B_DROWI Eukaryotic translation initiation factor 3
subunit B OS=Drosophila willistoni GN=eIF3-S9 PE=3 SV=1
Length = 690

Score = 30.4 bits (67), Expect = 4.4
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +1

Query: 250 YRRWQADETKILIKAKKQYCLGKLEQRETFWAQLKKAISDWKDMETMILVAARAQDYLEN 429
Y ++ + L +A K+ + + RETF K I++WKD ++ V R +N
Sbjct: 609 YPAFEQKDRLRLTRASKELLEKRSQLRETFMEYRNKRIAEWKDQKSR-RVMLRGHVDTDN 667

Query: 430 LERRE 444
LE E
Sbjct: 668 LETEE 672


>sp|B3ME25|EIF3B_DROAN Eukaryotic translation initiation factor 3
subunit B OS=Drosophila ananassae GN=eIF3-S9 PE=3 SV=1
Length = 686

Score = 30.4 bits (67), Expect = 4.4
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1

Query: 283 LIKAKKQYCLGKLEQRETFWAQLKKAISDWKDMETMILVAARAQDYLENLERRE 444
L +A K+ + + RETF K I++WKD ++ V R +NLE E
Sbjct: 616 LTRASKELLEKRAQLRETFMEYRNKRIAEWKDQKSR-RVMLRGHVDTDNLETEE 668


>sp|Q54E36|XPO2_DICDI Exportin-2 OS=Dictyostelium discoideum GN=xpo2
PE=3 SV=1
Length = 951

Score = 30.0 bits (66), Expect = 5.7
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = -3

Query: 462 QFSPKCFSAFQVLQIILGSCRNEYHSLH--VLPIAYS 358
+FSP CF Q+L I++ +CR EY L +LPI ++
Sbjct: 658 EFSPYCF---QLLSILVENCRPEYLDLFRPILPIIFN 691


>sp|Q9YGN1|SAND_FUGRU Protein SAND OS=Fugu rubripes GN=sand PE=3
SV=1
Length = 520

Score = 30.0 bits (66), Expect = 5.7
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
Frame = +1

Query: 172 PLYVRYGR------TMGSQAVGVQEVEADDTKYRRWQADETKILIKAKKQYCLGKLEQ 327
P+Y RYG TMG V VE+D R AD K++ AK L + Q
Sbjct: 132 PIYTRYGSEEALSSTMGVMMALVSFVESDKNTIRSIHADGCKVIFLAKSPLVLVGVSQ 189


tr_hit_id Q22G02
Definition tr|Q22G02|Q22G02_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210
Align length 81
Score (bit) 39.3
E-value 0.098
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913301|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_G05.
(482 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q22G02|Q22G02_TETTH Putative uncharacterized protein OS=Tetra... 39 0.098
tr|B4VM87|B4VM87_9CYAN Putative uncharacterized protein OS=Micro... 35 1.8
tr|Q5XBA4|Q5XBA4_STRP6 COME operon protein 3 OS=Streptococcus py... 35 2.4
tr|B6PUW3|B6PUW3_BRAFL Putative uncharacterized protein (Fragmen... 34 4.1
tr|O58643|O58643_PYRHO 397aa long hypothetical NADH oxidase OS=P... 34 4.1
tr|Q1IMY4|Q1IMY4_ACIBL PpiC-type peptidyl-prolyl cis-trans isome... 33 7.0
tr|Q1I5G2|Q1I5G2_PSEE4 Putative uncharacterized protein OS=Pseud... 33 7.0
tr|Q3K7X1|Q3K7X1_PSEPF RDD OS=Pseudomonas fluorescens (strain Pf... 33 9.2
tr|B6M462|B6M462_BRAFL Putative uncharacterized protein (Fragmen... 33 9.2
tr|A8P380|A8P380_BRUMA RH17657p, putative OS=Brugia malayi GN=Bm... 33 9.2

>tr|Q22G02|Q22G02_TETTH Putative uncharacterized protein
OS=Tetrahymena thermophila SB210 GN=TTHERM_00721550 PE=4
SV=1
Length = 2778

Score = 39.3 bits (90), Expect = 0.098
Identities = 23/81 (28%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = -3

Query: 444 FSAFQV--LQIILGSCRNEYHSLHVLPIAYSLLQLSPKCLSLFQFPQTILFFCLNEYLSL 271
F +F++ +I++ +++YH +++ +Y + +S CL + + QTI +CL++Y+SL
Sbjct: 1391 FFSFKISSAEILVFPSKSQYHVINIQTNSYQIYNISYSCLQIKYYNQTI--YCLDQYISL 1448

Query: 270 ICLPSPVFSVIGFHLLYTNSL 208
S FSV+ +L +S+
Sbjct: 1449 FYTNSS-FSVLDTNLQKESSI 1468


>tr|B4VM87|B4VM87_9CYAN Putative uncharacterized protein
OS=Microcoleus chthonoplastes PCC 7420 GN=MC7420_1961
PE=4 SV=1
Length = 1163

Score = 35.0 bits (79), Expect = 1.8
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = -3

Query: 402 RNEYHSLHVLPIAYSLLQLSPKCLSLFQFPQTILFFCLNEYLSLICLPSPVFSVIGFHLL 223
+ + LP+ L L + L+ Q PQT LF ++E +++ L PV GF +
Sbjct: 107 KKRWQDWETLPMVQQLGLLMDEVLA--QLPQTRLFIFVDEIDTILSLSFPVNDFFGF-IR 163

Query: 222 YTNSLRTHSSTIPHIKWS 169
Y + LR + +T + W+
Sbjct: 164 YCHELRQNQATYQRLTWA 181


>tr|Q5XBA4|Q5XBA4_STRP6 COME operon protein 3 OS=Streptococcus
pyogenes serotype M6 GN=M6_Spy1174 PE=4 SV=1
Length = 524

Score = 34.7 bits (78), Expect = 2.4
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Frame = -3

Query: 480 IDIKLLQFSPKCFSAFQVLQIILGSCRNEYHSLHVLPIAYSLLQLSP-----KCLSLFQF 316
I + +L F FS+F + ++L + + + +L +LP+ + LSP C LF F
Sbjct: 362 ISLGILSFLLFYFSSFNPMSMVLTALLSYFFALFILPLLCLVFCLSPLITLSGCNYLFLF 421

Query: 315 PQTILFFCLNEYLSLICLPSP-----VFSVIGFHLLY 220
+ ++ F N + S + SP + VI F + Y
Sbjct: 422 LEKVIQFLGNTFNSSLVFGSPTSWHLLILVISFAIFY 458


>tr|B6PUW3|B6PUW3_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_274385 PE=4 SV=1
Length = 291

Score = 33.9 bits (76), Expect = 4.1
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1

Query: 286 IKAKKQYCLGKLEQRETFWAQLKKAISDWKDMET 387
IKAKKQ C+ E+ + F+ L+ + DW+D+ T
Sbjct: 156 IKAKKQECIKSYEELKPFFPSLEPLLPDWEDIFT 189


>tr|O58643|O58643_PYRHO 397aa long hypothetical NADH oxidase
OS=Pyrococcus horikoshii GN=PH0890 PE=4 SV=1
Length = 397

Score = 33.9 bits (76), Expect = 4.1
Identities = 20/76 (26%), Positives = 36/76 (47%)
Frame = +1

Query: 136 SRSSLWHISCRAPLYVRYGRTMGSQAVGVQEVEADDTKYRRWQADETKILIKAKKQYCLG 315
+R +WH S A L++ GR G+Q VG KY A + L++ ++ +
Sbjct: 328 ARKEIWHGSHIAKLFIENGRLNGAQLVG---------KYALQYAGTIEYLVRTRRPIRID 378

Query: 316 KLEQRETFWAQLKKAI 363
+ +TF ++ KA+
Sbjct: 379 SISDTKTFIKEVWKAM 394


>tr|Q1IMY4|Q1IMY4_ACIBL PpiC-type peptidyl-prolyl cis-trans
isomerase OS=Acidobacteria bacterium (strain Ellin345)
GN=Acid345_2765 PE=3 SV=1
Length = 654

Score = 33.1 bits (74), Expect = 7.0
Identities = 27/98 (27%), Positives = 40/98 (40%)
Frame = +1

Query: 181 VRYGRTMGSQAVGVQEVEADDTKYRRWQADETKILIKAKKQYCLGKLEQRETFWAQLKKA 360
++Y +GS+ GVQ +AD KY E I A Q+ L + Q
Sbjct: 238 IKYVSVIGSKLPGVQPSDADIQKYYNDHKTEFTIPQTATVQHILVMVPQ----------- 286

Query: 361 ISDWKDMETMILVAARAQDYLENLERRETFGAELKKFN 474
D +T A+A+DYL+ FG KK++
Sbjct: 287 ---GADAKTDAAAKAKAEDYLKQARGGANFGELAKKYS 321


>tr|Q1I5G2|Q1I5G2_PSEE4 Putative uncharacterized protein
OS=Pseudomonas entomophila (strain L48) GN=PSEEN4440
PE=4 SV=1
Length = 162

Score = 33.1 bits (74), Expect = 7.0
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = +1

Query: 169 APLYVRYGRTMGSQAVGVQEVEADDTKYRRWQADETKILIKAKKQYCLGKLEQRETFWAQ 348
A + G+T+G Q GV+ AD + WQA + ++ CLG FW+
Sbjct: 83 AKFWTHGGQTLGMQVWGVRVQNADGSAISLWQA-LLRFVVSIASWLCLG----LGFFWSM 137

Query: 349 LKKAISDWKDM 381
+ K W D+
Sbjct: 138 IDKRQRSWHDI 148


>tr|Q3K7X1|Q3K7X1_PSEPF RDD OS=Pseudomonas fluorescens (strain
Pf0-1) GN=Pf01_4396 PE=4 SV=1
Length = 162

Score = 32.7 bits (73), Expect = 9.2
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +1

Query: 169 APLYVRYGRTMGSQAVGVQEVEADDTKYRRWQADETKILIKAKKQYCLGKLEQRETFWAQ 348
A + G+T+G Q G++ AD T WQA + ++ CLG FW+
Sbjct: 83 AKFWTHAGQTLGMQVWGIRVQNADGTAISLWQA-LLRFMVSIASWLCLG----LGFFWSL 137

Query: 349 LKKAISDWKDM 381
K W D+
Sbjct: 138 FDKQKRAWHDI 148


>tr|B6M462|B6M462_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_218254 PE=4 SV=1
Length = 137

Score = 32.7 bits (73), Expect = 9.2
Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Frame = +1

Query: 217 GVQEVEADDTKYRRWQADETKILIKAKKQYCLGKLEQRETFWAQLKKAI--SDWKDMETM 390
G+Q ++ + T++ + ++DE K L + ++Q KL++ + Q KKA+ D K+ +
Sbjct: 18 GMQRLQQEMTEFEKLKSDELKRLEEFRQQEA-AKLKKERKLFEQHKKALLQPDKKERAEI 76

Query: 391 ILVAARAQDYLENLERRE 444
+ + Q+ + L+RRE
Sbjct: 77 EELREQVQELQDELQRRE 94


>tr|A8P380|A8P380_BRUMA RH17657p, putative OS=Brugia malayi
GN=Bm1_15245 PE=4 SV=1
Length = 173

Score = 32.7 bits (73), Expect = 9.2
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1

Query: 220 VQEVEADDTKYRRWQADETKILIKAKKQYCLGKLEQRETFWAQLKKA--ISDWKDMETMI 393
+Q++ D + WQ + TK+ A K C +EQ E A +KA +S W+ +E +
Sbjct: 74 LQDLPTDGSAVHYWQFERTKLKQWAAKYLCPSDIEQYERNLAYFEKANILSRWRKIEQRV 133