BP913302 |
Clone id |
YMU001_000028_G06 |
Library |
YMU01 |
Length |
600 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000028_G06. |
Accession |
BP913302 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GTTCTATGTCCACACCTGCCTTTGCATTCCCAGAGGCATGTGCTGCATACAAAGAGGATA TGATCTCAGTGGCATTTAGACCTGCGTTTTCTGCAAGCATGCGGGGAACAATCTCAAAAC ATTCCCCAAACTTTGCAATGGCATATTGATCCAACCCTGTCTCTTTATATGCTAACTCTT TAAGATTTCTTGCTAGTTCTATTTCCGTGGCTCCTGCGCCTGGTACAAATCGACTGTCCC TGCACATTGCCTTGAAGCTATTAACCCCATCATCGATGGCCCGTTCAATATCATCCAAAA CACTGTCCACACTACCCCTCACAACCACCGTTGTAAGTTTATTGCCGCCCTCCTCATTCT TCACCACAGTGACTCTGGAACCACCGATTTCTTCTACTGATACTGAGTCAGCATACCCTA ATTCATCAGCACTTGGCCTACCCAGCTTGACCAGAGACACAGCACCAGTTGTCCTACAGA ACCTTCTCAGCTCAAACTTTGAGCTTATCTTCAAAACCATGAGCTTGTAACGTTCACAAA AATGCAAAGCCATCTCACCCACGGACCCTCCACTCACAACCACCGTAGCACCAGAATCAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q552J0 |
Definition |
sp|Q552J0|TCPQ_DICDI T-complex protein 1 subunit theta OS=Dictyostelium discoideum |
Align length |
185 |
Score (bit) |
208.0 |
E-value |
2.0e-53 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NV11 |
Definition |
tr|A9NV11|A9NV11_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
185 |
Score (bit) |
310.0 |
E-value |
4.0e-83 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913302|Adiantum capillus-veneris mRNA, clone: YMU001_000028_G06. (600 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NV11|A9NV11_PICSI Putative uncharacterized protein OS=Picea... 310 4e-83 tr|Q75HJ3|Q75HJ3_ORYSJ Os03g0804800 protein OS=Oryza sativa subs... 303 7e-81 tr|B8ALS4|B8ALS4_ORYSI Putative uncharacterized protein OS=Oryza... 303 7e-81 tr|A3ANT1|A3ANT1_ORYSJ Putative uncharacterized protein OS=Oryza... 303 7e-81 tr|A9P9J0|A9P9J0_POPTR Putative uncharacterized protein OS=Popul... 299 7e-80 tr|A7PW56|A7PW56_VITVI Chromosome chr8 scaffold_34, whole genome... 299 7e-80 tr|A9PG05|A9PG05_POPTR Putative uncharacterized protein OS=Popul... 295 2e-78 tr|B7FLW6|B7FLW6_MEDTR Putative uncharacterized protein OS=Medic... 291 3e-77 tr|A9U1I5|A9U1I5_PHYPA Predicted protein OS=Physcomitrella paten... 282 9e-75 tr|Q9SQR6|Q9SQR6_ARATH Putative T-complex protein 1, theta subun... 277 4e-73 tr|Q94K05|Q94K05_ARATH Putative T-complex protein 1, theta subun... 277 4e-73 tr|Q01CF1|Q01CF1_OSTTA Putative TCP-1/cpn60 chaperonin family pr... 230 5e-59 tr|A4RUN3|A4RUN3_OSTLU Predicted protein OS=Ostreococcus lucimar... 230 5e-59 tr|A8IF08|A8IF08_CHLRE T-complex protein, theta subunit OS=Chlam... 225 1e-57 tr|Q8WSY4|Q8WSY4_PHYPO CCT chaperonin theta subunit OS=Physarum ... 220 6e-56 tr|A7SBU6|A7SBU6_NEMVE Predicted protein OS=Nematostella vectens... 213 7e-54 tr|Q2VTM6|Q2VTM6_9PERC TCP1-theta OS=Notothenia coriiceps PE=2 SV=1 212 2e-53 tr|Q5DW61|Q5DW61_ONCMY Chaperonin containing TCP1 subunit 8 OS=O... 210 4e-53 tr|B5X4M2|B5X4M2_SALSA T-complex protein 1 subunit theta OS=Salm... 210 4e-53 tr|Q2H9D0|Q2H9D0_CHAGB Putative uncharacterized protein OS=Chaet... 207 3e-52 tr|B2AWH6|B2AWH6_PODAN Predicted CDS Pa_7_7200 OS=Podospora anse... 207 3e-52 tr|B6RB18|B6RB18_HALDI Chaperonin containing tcp1 OS=Haliotis di... 207 5e-52 tr|Q4SFT9|Q4SFT9_TETNG Chromosome 7 SCAF14601, whole genome shot... 206 6e-52 tr|A1YM11|A1YM11_BOMMO Chaperonin OS=Bombyx mori PE=2 SV=1 206 8e-52 tr|Q7Z759|Q7Z759_HUMAN CCT8 protein OS=Homo sapiens GN=CCT8 PE=2... 205 1e-51 tr|Q53HU0|Q53HU0_HUMAN Chaperonin containing TCP1, subunit 8 (Th... 205 1e-51 tr|B4DQH4|B4DQH4_HUMAN cDNA FLJ59382, highly similar to T-comple... 205 1e-51 tr|B4DEM7|B4DEM7_HUMAN cDNA FLJ53379, highly similar to T-comple... 205 1e-51 tr|Q7ZU96|Q7ZU96_DANRE Chaperonin containing TCP1, subunit 8 (Th... 204 2e-51 tr|Q6TNV4|Q6TNV4_DANRE Chaperonin containing TCP1, subunit 8 (Th... 204 2e-51
>tr|A9NV11|A9NV11_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 544
Score = 310 bits (794), Expect = 4e-83 Identities = 152/185 (82%), Positives = 169/185 (91%) Frame = -3
Query: 556 EMALHFCERYKLMVLKISSKFELRRFCRTTGAVSLVKLGRPSADELGYADSVSVEEIGGS 377 EMALHFCERYKLMVLKISSKFELRRFCRTTGAVSLVKLG+P DELG+ADSVSVEEIGG Sbjct: 301 EMALHFCERYKLMVLKISSKFELRRFCRTTGAVSLVKLGQPGPDELGFADSVSVEEIGGV 360
Query: 376 RVTVVKNEEGGNKLTTVVVRGSVDSVLDDIERAIDDGVNSFKAMCRDSRFVPGAGATEIE 197 RVT+VKNEEGGN ++TVV+RGS DS+LDD+ERA+DDGVN++KAMCRDSR +PGAGATEIE Sbjct: 361 RVTIVKNEEGGNLVSTVVLRGSTDSILDDLERAVDDGVNNYKAMCRDSRILPGAGATEIE 420
Query: 196 LARNLKELAYKETGLDQYAIAKFGECFEIVPRMLAENAGLNATEIISSLYAAHASGNAKA 17 LAR LK+ AYKETGLDQYAI KF E E+VPR LAENAGLNATEIISSLYA HASGN K Sbjct: 421 LARRLKDFAYKETGLDQYAIGKFAESLELVPRTLAENAGLNATEIISSLYAEHASGNFKV 480
Query: 16 GVDIE 2 G+D++ Sbjct: 481 GIDLD 485
>tr|Q75HJ3|Q75HJ3_ORYSJ Os03g0804800 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0015I02.11 PE=3 SV=1 Length = 546
Score = 303 bits (775), Expect = 7e-81 Identities = 146/185 (78%), Positives = 168/185 (90%) Frame = -3
Query: 556 EMALHFCERYKLMVLKISSKFELRRFCRTTGAVSLVKLGRPSADELGYADSVSVEEIGGS 377 +MALHFCERYKLMVL+ISSKFELRRFCRTTG+++L+KL RP+ADELGYADSVSVEEIGG+ Sbjct: 303 DMALHFCERYKLMVLRISSKFELRRFCRTTGSIALLKLSRPNADELGYADSVSVEEIGGA 362
Query: 376 RVTVVKNEEGGNKLTTVVVRGSVDSVLDDIERAIDDGVNSFKAMCRDSRFVPGAGATEIE 197 RVTVVKNEEGGN + TVV+RGS DS+LDD+ERA+DDGVN++K+MCRDSR +PGA ATEIE Sbjct: 363 RVTVVKNEEGGNSVATVVLRGSTDSILDDLERAVDDGVNTYKSMCRDSRIIPGAAATEIE 422
Query: 196 LARNLKELAYKETGLDQYAIAKFGECFEIVPRMLAENAGLNATEIISSLYAAHASGNAKA 17 LAR LKE + KETGLDQYAIAKF E FE+VPR LAENAGL+A EIISSLYA HA GN K Sbjct: 423 LARRLKEFSLKETGLDQYAIAKFAESFEMVPRTLAENAGLSAMEIISSLYAEHAGGNTKV 482
Query: 16 GVDIE 2 G+D+E Sbjct: 483 GIDLE 487
>tr|B8ALS4|B8ALS4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13967 PE=4 SV=1 Length = 546
Score = 303 bits (775), Expect = 7e-81 Identities = 146/185 (78%), Positives = 168/185 (90%) Frame = -3
Query: 556 EMALHFCERYKLMVLKISSKFELRRFCRTTGAVSLVKLGRPSADELGYADSVSVEEIGGS 377 +MALHFCERYKLMVL+ISSKFELRRFCRTTG+++L+KL RP+ADELGYADSVSVEEIGG+ Sbjct: 303 DMALHFCERYKLMVLRISSKFELRRFCRTTGSIALLKLSRPNADELGYADSVSVEEIGGA 362
Query: 376 RVTVVKNEEGGNKLTTVVVRGSVDSVLDDIERAIDDGVNSFKAMCRDSRFVPGAGATEIE 197 RVTVVKNEEGGN + TVV+RGS DS+LDD+ERA+DDGVN++K+MCRDSR +PGA ATEIE Sbjct: 363 RVTVVKNEEGGNSVATVVLRGSTDSILDDLERAVDDGVNTYKSMCRDSRIIPGAAATEIE 422
Query: 196 LARNLKELAYKETGLDQYAIAKFGECFEIVPRMLAENAGLNATEIISSLYAAHASGNAKA 17 LAR LKE + KETGLDQYAIAKF E FE+VPR LAENAGL+A EIISSLYA HA GN K Sbjct: 423 LARRLKEFSLKETGLDQYAIAKFAESFEMVPRTLAENAGLSAMEIISSLYAEHAGGNTKV 482
Query: 16 GVDIE 2 G+D+E Sbjct: 483 GIDLE 487
>tr|A3ANT1|A3ANT1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_012453 PE=3 SV=1 Length = 540
Score = 303 bits (775), Expect = 7e-81 Identities = 146/185 (78%), Positives = 168/185 (90%) Frame = -3
Query: 556 EMALHFCERYKLMVLKISSKFELRRFCRTTGAVSLVKLGRPSADELGYADSVSVEEIGGS 377 +MALHFCERYKLMVL+ISSKFELRRFCRTTG+++L+KL RP+ADELGYADSVSVEEIGG+ Sbjct: 297 DMALHFCERYKLMVLRISSKFELRRFCRTTGSIALLKLSRPNADELGYADSVSVEEIGGA 356
Query: 376 RVTVVKNEEGGNKLTTVVVRGSVDSVLDDIERAIDDGVNSFKAMCRDSRFVPGAGATEIE 197 RVTVVKNEEGGN + TVV+RGS DS+LDD+ERA+DDGVN++K+MCRDSR +PGA ATEIE Sbjct: 357 RVTVVKNEEGGNSVATVVLRGSTDSILDDLERAVDDGVNTYKSMCRDSRIIPGAAATEIE 416
Query: 196 LARNLKELAYKETGLDQYAIAKFGECFEIVPRMLAENAGLNATEIISSLYAAHASGNAKA 17 LAR LKE + KETGLDQYAIAKF E FE+VPR LAENAGL+A EIISSLYA HA GN K Sbjct: 417 LARRLKEFSLKETGLDQYAIAKFAESFEMVPRTLAENAGLSAMEIISSLYAEHAGGNTKV 476
Query: 16 GVDIE 2 G+D+E Sbjct: 477 GIDLE 481
>tr|A9P9J0|A9P9J0_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 545
Score = 299 bits (766), Expect = 7e-80 Identities = 144/185 (77%), Positives = 166/185 (89%) Frame = -3
Query: 556 EMALHFCERYKLMVLKISSKFELRRFCRTTGAVSLVKLGRPSADELGYADSVSVEEIGGS 377 EMALHFCERYKLMVLKISSKFELRRFCRTTGAV+++KL P+ D+LGY DS+SVEEIGG+ Sbjct: 301 EMALHFCERYKLMVLKISSKFELRRFCRTTGAVAILKLSPPNPDDLGYVDSISVEEIGGT 360
Query: 376 RVTVVKNEEGGNKLTTVVVRGSVDSVLDDIERAIDDGVNSFKAMCRDSRFVPGAGATEIE 197 RVTVV+NEEGGN + TVV+RGS DS+LDD+ERA+DDGVN++KAMCRDSR VPG ATEIE Sbjct: 361 RVTVVRNEEGGNSVCTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGGAATEIE 420
Query: 196 LARNLKELAYKETGLDQYAIAKFGECFEIVPRMLAENAGLNATEIISSLYAAHASGNAKA 17 LA+ LKE A+KETGLDQYAIAKF E FE++P+ LAENAGLNA EIISSLYA HASGN K Sbjct: 421 LAKRLKEFAFKETGLDQYAIAKFAESFEMIPKTLAENAGLNAMEIISSLYADHASGNIKV 480
Query: 16 GVDIE 2 G+D+E Sbjct: 481 GIDLE 485
>tr|A7PW56|A7PW56_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025480001 PE=3 SV=1 Length = 545
Score = 299 bits (766), Expect = 7e-80 Identities = 144/185 (77%), Positives = 167/185 (90%) Frame = -3
Query: 556 EMALHFCERYKLMVLKISSKFELRRFCRTTGAVSLVKLGRPSADELGYADSVSVEEIGGS 377 EMALHFCERYKLMVLKISSKFELRRFCRTTGAV+++KL +P+ D+LGY DSVSVEEIGG Sbjct: 301 EMALHFCERYKLMVLKISSKFELRRFCRTTGAVAVLKLSQPNPDDLGYVDSVSVEEIGGV 360
Query: 376 RVTVVKNEEGGNKLTTVVVRGSVDSVLDDIERAIDDGVNSFKAMCRDSRFVPGAGATEIE 197 RVT+VKNEEGGN + TVV+RGS DS+LDD+ERA+DDGVN++KAMCRDSR VPGA ATEIE Sbjct: 361 RVTIVKNEEGGNSVCTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIE 420
Query: 196 LARNLKELAYKETGLDQYAIAKFGECFEIVPRMLAENAGLNATEIISSLYAAHASGNAKA 17 LAR LKE ++KETGLDQYAIAKF E FE+VP+ LAENAGLNA EIISSLYA H++GN K Sbjct: 421 LARKLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHSTGNTKV 480
Query: 16 GVDIE 2 G+D++ Sbjct: 481 GIDLD 485
>tr|A9PG05|A9PG05_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 545
Score = 295 bits (754), Expect = 2e-78 Identities = 140/185 (75%), Positives = 165/185 (89%) Frame = -3
Query: 556 EMALHFCERYKLMVLKISSKFELRRFCRTTGAVSLVKLGRPSADELGYADSVSVEEIGGS 377 EMALHFCERYKLMVLKISSKFELRRFCRTTGAV+++KL PS D+LG DS+SVEEIGG+ Sbjct: 301 EMALHFCERYKLMVLKISSKFELRRFCRTTGAVAILKLSPPSPDDLGCVDSISVEEIGGA 360
Query: 376 RVTVVKNEEGGNKLTTVVVRGSVDSVLDDIERAIDDGVNSFKAMCRDSRFVPGAGATEIE 197 RVT+V+NEEGGN + TVV+RGS DS+LDD+ERA+DDGVN++KAMCRDSR +PG ATEIE Sbjct: 361 RVTIVRNEEGGNSVCTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIIPGGAATEIE 420
Query: 196 LARNLKELAYKETGLDQYAIAKFGECFEIVPRMLAENAGLNATEIISSLYAAHASGNAKA 17 LA+ L+E ++KETGLDQYAIAKF E FE++P+ LAENAGLNA EIISSLYA HASGN K Sbjct: 421 LAKRLREFSFKETGLDQYAIAKFAESFEMIPKTLAENAGLNAMEIISSLYAEHASGNTKV 480
Query: 16 GVDIE 2 G+D+E Sbjct: 481 GIDLE 485
>tr|B7FLW6|B7FLW6_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 540
Score = 291 bits (744), Expect = 3e-77 Identities = 139/185 (75%), Positives = 165/185 (89%) Frame = -3
Query: 556 EMALHFCERYKLMVLKISSKFELRRFCRTTGAVSLVKLGRPSADELGYADSVSVEEIGGS 377 EMALHFCERYKLMVLKISSKFELRRFCRTTG+V+++KL +P+ D+LG+ADSVSVEEIGG+ Sbjct: 296 EMALHFCERYKLMVLKISSKFELRRFCRTTGSVAMLKLCQPNPDDLGFADSVSVEEIGGA 355
Query: 376 RVTVVKNEEGGNKLTTVVVRGSVDSVLDDIERAIDDGVNSFKAMCRDSRFVPGAGATEIE 197 RVT+VKNE GN TVV+RGS DS+LDD+ERA+DDGVN++KAMCRDSR VPGA ATEIE Sbjct: 356 RVTIVKNEVDGNSAATVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIE 415
Query: 196 LARNLKELAYKETGLDQYAIAKFGECFEIVPRMLAENAGLNATEIISSLYAAHASGNAKA 17 LA+ +K+ ++KETGLDQYAIAKF E FE++PR AENAGLNA EIISSLYA HA+GN K Sbjct: 416 LAKRVKDFSFKETGLDQYAIAKFAESFEMIPRTFAENAGLNAMEIISSLYAEHANGNTKV 475
Query: 16 GVDIE 2 G+D+E Sbjct: 476 GIDLE 480
>tr|A9U1I5|A9U1I5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_227454 PE=4 SV=1 Length = 548
Score = 282 bits (722), Expect = 9e-75 Identities = 138/185 (74%), Positives = 162/185 (87%) Frame = -3
Query: 556 EMALHFCERYKLMVLKISSKFELRRFCRTTGAVSLVKLGRPSADELGYADSVSVEEIGGS 377 EMALHFCERYKLMV+KI+SKFELRRFCRTTGAVSLVKL +P+ DELG+ADSV VEE+GG+ Sbjct: 304 EMALHFCERYKLMVVKIASKFELRRFCRTTGAVSLVKLQQPTPDELGFADSVVVEELGGT 363
Query: 376 RVTVVKNEEGGNKLTTVVVRGSVDSVLDDIERAIDDGVNSFKAMCRDSRFVPGAGATEIE 197 RVTVVKNE GGN + T+V+RGS DS+LDD+ERA+DDGVNS+KAMCRDS+ VPGAGATEIE Sbjct: 364 RVTVVKNETGGNLVATLVIRGSTDSLLDDVERAVDDGVNSYKAMCRDSKLVPGAGATEIE 423
Query: 196 LARNLKELAYKETGLDQYAIAKFGECFEIVPRMLAENAGLNATEIISSLYAAHASGNAKA 17 LA+ LKE E GL QYAI K+ + E+VPR+LAENAGLN+T++ISSLYAAHA+ A Sbjct: 424 LAKRLKEYGAMEAGLVQYAIDKYADSLEVVPRILAENAGLNSTDVISSLYAAHAANRTSA 483
Query: 16 GVDIE 2 GVDIE Sbjct: 484 GVDIE 488
>tr|Q9SQR6|Q9SQR6_ARATH Putative T-complex protein 1, theta subunit (TCP-1-Theta) OS=Arabidopsis thaliana GN=T11I18.7 PE=3 SV=1 Length = 528
Score = 277 bits (708), Expect = 4e-73 Identities = 132/185 (71%), Positives = 157/185 (84%) Frame = -3
Query: 556 EMALHFCERYKLMVLKISSKFELRRFCRTTGAVSLVKLGRPSADELGYADSVSVEEIGGS 377 EMALHFCERYK+MVLKISSKFELRRFCRT GAV+ +KL RPS ++LGY DS+SVEEIGG Sbjct: 302 EMALHFCERYKIMVLKISSKFELRRFCRTAGAVAHLKLSRPSPEDLGYVDSISVEEIGGV 361
Query: 376 RVTVVKNEEGGNKLTTVVVRGSVDSVLDDIERAIDDGVNSFKAMCRDSRFVPGAGATEIE 197 VT+ +NEEGGN ++TVV+RGS DS+LDD+ERA+DDGVN++KAMCRDSR VPGA ATEIE Sbjct: 362 TVTIARNEEGGNSISTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIE 421
Query: 196 LARNLKELAYKETGLDQYAIAKFGECFEIVPRMLAENAGLNATEIISSLYAAHASGNAKA 17 LA+ LKE A E GLD+YAI K+ E FE VP+ LA+NAGLNA EII++LY H SGN K Sbjct: 422 LAQRLKEYANAEIGLDKYAITKYAESFEFVPKTLADNAGLNAMEIIAALYTGHGSGNTKL 481
Query: 16 GVDIE 2 G+D+E Sbjct: 482 GIDLE 486
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