BP913303 |
Clone id |
YMU001_000028_G07 |
Library |
YMU01 |
Length |
539 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000028_G07. |
Accession |
BP913303 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GCTTGCAGATGTCATCCTTGGACATCAGTCATCACAAGGTCCTACAAATAAGATAAAATG CAAATACTCTCTTTTCCAAAAGGTAGCAAGCAGTAGGTATAGGTACCATTAATGCTAGAT TCAGAGTTGCAGAAGTCACAAGAATCAAAGACAAATCTTGCAGACAAAGGTAAAGCTAAA GTGGACCCTCCACCAACTAGCAAAAAAGGTGTGATAGCATATGCCTCTACATCAAAGAAC CCTCATGGATCAATCTCTTCAAGCACATCAGGCTTTCAAAAGTTCAAGTCAATTGCTGAC CCAACTAAAACCTCTAAGGAGACACCCAAAAAATCAAAGGTATATCAGCCAAAGTACTCA AGAAAGCAAAGGAAAGTCAAGGAAGTGTTTGTTCAGAGCAGTTTCATAGAAGTCAATGAT CCGATCTGGATTAAAGACATGAAATCAACACAGAAAGACAAACACATGGGATGGATAACA TCAAAGTGGAGCTTAAAGGAACAGGAGTACTATGGAGGTAACAGACAGATATGGGTACC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6L1N5 |
Definition |
sp|Q6L1N5|SYV_PICTO Valyl-tRNA synthetase OS=Picrophilus torridus |
Align length |
58 |
Score (bit) |
31.6 |
E-value |
2.6 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913303|Adiantum capillus-veneris mRNA, clone: YMU001_000028_G07. (539 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q6L1N5|SYV_PICTO Valyl-tRNA synthetase OS=Picrophilus torridu... 32 2.6 sp|P58939|CARB_CORGL Carbamoyl-phosphate synthase large chain OS... 32 2.6 sp|P36181|HSP80_SOLLC Heat shock cognate protein 80 OS=Solanum l... 31 3.4 sp|Q8IVF2|AHNK2_HUMAN Protein AHNAK2 OS=Homo sapiens GN=AHNAK2 P... 30 5.7 sp|P51819|HSP83_IPONI Heat shock protein 83 OS=Ipomoea nil GN=HS... 30 7.5 sp|P36182|HSP82_TOBAC Heat shock protein 82 (Fragment) OS=Nicoti... 30 7.5 sp|Q97CR9|SYV_THEVO Valyl-tRNA synthetase OS=Thermoplasma volcan... 30 9.8 sp|Q0J4P2|HSP81_ORYSJ Heat shock protein 81-1 OS=Oryza sativa su... 30 9.8 sp|A2YWQ1|HSP81_ORYSI Heat shock protein 81-1 OS=Oryza sativa su... 30 9.8 sp|P27323|HSP81_ARATH Heat shock protein 81-1 OS=Arabidopsis tha... 30 9.8
>sp|Q6L1N5|SYV_PICTO Valyl-tRNA synthetase OS=Picrophilus torridus GN=valS PE=3 SV=1 Length = 768
Score = 31.6 bits (70), Expect = 2.6 Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = +1
Query: 364 KQRKVKEVFVQSSFIEVNDPI-WIKDMKSTQKDKHMGWITSKWSLKEQEYYGGNRQIW 534 KQ +K++ ++ +++ + I WI D T+ + + W + Q YYG +W Sbjct: 339 KQWYIKDLDIKDELLDLGNRIEWIPDYMKTRYQNWVSGLKWDWCISRQRYYGIPFPVW 396
>sp|P58939|CARB_CORGL Carbamoyl-phosphate synthase large chain OS=Corynebacterium glutamicum GN=carB PE=3 SV=1 Length = 1113
Score = 31.6 bits (70), Expect = 2.6 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -1
Query: 293 IDLNF*KPDVLEEIDP*GFFDVEAYAITP-FLLVGGGSTLALPLSARFVFDSCDFCNSES 117 +D F D+L E G D++ A+ P F G TL L L R VF + D C +E Sbjct: 485 VDAPFLNEDLLREAKFMGLSDLQIAALRPEFAGEDGVRTLRLSLGIRPVFKTVDTCAAEF 544
Query: 116 SINGTYTY 93 Y Y Sbjct: 545 EAKTPYHY 552
>sp|P36181|HSP80_SOLLC Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1 Length = 699
Score = 31.2 bits (69), Expect = 3.4 Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 3/49 (6%) Frame = +1
Query: 352 KYSRKQRKVKEVFVQSSFIEVNDPIWIKDMKSTQKDKHMGW---ITSKW 489 K +K++KVKEV + S + PIW++ + K+++ + +T+ W Sbjct: 243 KEEKKKKKVKEVSNEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDW 291
>sp|Q8IVF2|AHNK2_HUMAN Protein AHNAK2 OS=Homo sapiens GN=AHNAK2 PE=1 SV=2 Length = 5795
Score = 30.4 bits (67), Expect = 5.7 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = +1
Query: 136 SQESKTNLADKGKAKVDPPPTSKKGVI 216 SQE+ T LAD+G+A D P + K G++ Sbjct: 5619 SQEATTPLADEGRAPKDKPESKKSGLL 5645
>sp|P51819|HSP83_IPONI Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1 Length = 703
Score = 30.0 bits (66), Expect = 7.5 Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Frame = +1
Query: 352 KYSRKQRKVKEVFVQSSFIEVNDPIWIKDMKSTQKDKHMGW---ITSKW 489 K +K++K+KEV + I PIW++ + K+++ + +T+ W Sbjct: 248 KEGKKKKKIKEVSHEWQLINKQKPIWLRKPEEITKEEYASFYKSLTNDW 296
>sp|P36182|HSP82_TOBAC Heat shock protein 82 (Fragment) OS=Nicotiana tabacum GN=HSP82 PE=2 SV=1 Length = 499
Score = 30.0 bits (66), Expect = 7.5 Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 3/49 (6%) Frame = +1
Query: 352 KYSRKQRKVKEVFVQSSFIEVNDPIWIKDMKSTQKDKHMGW---ITSKW 489 K K++K+KEV + I PIW++ + KD++ + +T+ W Sbjct: 44 KEKGKKKKIKEVSHEWQLINKQKPIWLRKPEEITKDEYASFYKSLTNDW 92
>sp|Q97CR9|SYV_THEVO Valyl-tRNA synthetase OS=Thermoplasma volcanium GN=valS PE=3 SV=1 Length = 790
Score = 29.6 bits (65), Expect = 9.8 Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = +1
Query: 355 YSRKQRKVKEVFVQSSFIEVNDPI-WIKDMKSTQKDKHMGWITSKWSLKEQEYYGGNRQI 531 + KQ ++ + ++ FI+ + WI D T+ + + + W + Q YYG + Sbjct: 345 FIEKQWFIRYLDLKKDFIDSGRAVKWIPDYMRTRYENWVNGLKWDWCISRQRYYGVPFPV 404
Query: 532 W 534 W Sbjct: 405 W 405
>sp|Q0J4P2|HSP81_ORYSJ Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2 Length = 699
Score = 29.6 bits (65), Expect = 9.8 Identities = 12/46 (26%), Positives = 27/46 (58%), Gaps = 3/46 (6%) Frame = +1
Query: 361 RKQRKVKEVFVQSSFIEVNDPIWIKDMKSTQKDKHMGW---ITSKW 489 +K++K+KEV + S + PIW++ + K+++ + +T+ W Sbjct: 248 KKKKKIKEVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDW 293
>sp|A2YWQ1|HSP81_ORYSI Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1 Length = 699
Score = 29.6 bits (65), Expect = 9.8 Identities = 12/46 (26%), Positives = 27/46 (58%), Gaps = 3/46 (6%) Frame = +1
Query: 361 RKQRKVKEVFVQSSFIEVNDPIWIKDMKSTQKDKHMGW---ITSKW 489 +K++K+KEV + S + PIW++ + K+++ + +T+ W Sbjct: 248 KKKKKIKEVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDW 293
>sp|P27323|HSP81_ARATH Heat shock protein 81-1 OS=Arabidopsis thaliana GN=HSP81-1 PE=2 SV=3 Length = 700
Score = 29.6 bits (65), Expect = 9.8 Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Frame = +1
Query: 352 KYSRKQRKVKEVFVQSSFIEVNDPIWIKDMKSTQKDKHMGW---ITSKW 489 K +K++K+KEV + I PIW++ + K+++ + +T+ W Sbjct: 244 KDGKKKKKIKEVSHEWELINKQKPIWLRKPEEITKEEYAAFYKSLTNDW 292
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q8I8Z0 |
Definition |
tr|Q8I8Z0|Q8I8Z0_9EUGL Heat shock protein 90 (Fragment) OS=Neobodo saliens |
Align length |
49 |
Score (bit) |
34.3 |
E-value |
4.3 |
Report |
|