BP913303
Clone id YMU001_000028_G07
Library
Length 539
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000028_G07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GCTTGCAGATGTCATCCTTGGACATCAGTCATCACAAGGTCCTACAAATAAGATAAAATG
CAAATACTCTCTTTTCCAAAAGGTAGCAAGCAGTAGGTATAGGTACCATTAATGCTAGAT
TCAGAGTTGCAGAAGTCACAAGAATCAAAGACAAATCTTGCAGACAAAGGTAAAGCTAAA
GTGGACCCTCCACCAACTAGCAAAAAAGGTGTGATAGCATATGCCTCTACATCAAAGAAC
CCTCATGGATCAATCTCTTCAAGCACATCAGGCTTTCAAAAGTTCAAGTCAATTGCTGAC
CCAACTAAAACCTCTAAGGAGACACCCAAAAAATCAAAGGTATATCAGCCAAAGTACTCA
AGAAAGCAAAGGAAAGTCAAGGAAGTGTTTGTTCAGAGCAGTTTCATAGAAGTCAATGAT
CCGATCTGGATTAAAGACATGAAATCAACACAGAAAGACAAACACATGGGATGGATAACA
TCAAAGTGGAGCTTAAAGGAACAGGAGTACTATGGAGGTAACAGACAGATATGGGTACC
■■Homology search results ■■ -
sp_hit_id Q6L1N5
Definition sp|Q6L1N5|SYV_PICTO Valyl-tRNA synthetase OS=Picrophilus torridus
Align length 58
Score (bit) 31.6
E-value 2.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913303|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_G07.
(539 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6L1N5|SYV_PICTO Valyl-tRNA synthetase OS=Picrophilus torridu... 32 2.6
sp|P58939|CARB_CORGL Carbamoyl-phosphate synthase large chain OS... 32 2.6
sp|P36181|HSP80_SOLLC Heat shock cognate protein 80 OS=Solanum l... 31 3.4
sp|Q8IVF2|AHNK2_HUMAN Protein AHNAK2 OS=Homo sapiens GN=AHNAK2 P... 30 5.7
sp|P51819|HSP83_IPONI Heat shock protein 83 OS=Ipomoea nil GN=HS... 30 7.5
sp|P36182|HSP82_TOBAC Heat shock protein 82 (Fragment) OS=Nicoti... 30 7.5
sp|Q97CR9|SYV_THEVO Valyl-tRNA synthetase OS=Thermoplasma volcan... 30 9.8
sp|Q0J4P2|HSP81_ORYSJ Heat shock protein 81-1 OS=Oryza sativa su... 30 9.8
sp|A2YWQ1|HSP81_ORYSI Heat shock protein 81-1 OS=Oryza sativa su... 30 9.8
sp|P27323|HSP81_ARATH Heat shock protein 81-1 OS=Arabidopsis tha... 30 9.8

>sp|Q6L1N5|SYV_PICTO Valyl-tRNA synthetase OS=Picrophilus torridus
GN=valS PE=3 SV=1
Length = 768

Score = 31.6 bits (70), Expect = 2.6
Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1

Query: 364 KQRKVKEVFVQSSFIEVNDPI-WIKDMKSTQKDKHMGWITSKWSLKEQEYYGGNRQIW 534
KQ +K++ ++ +++ + I WI D T+ + + W + Q YYG +W
Sbjct: 339 KQWYIKDLDIKDELLDLGNRIEWIPDYMKTRYQNWVSGLKWDWCISRQRYYGIPFPVW 396


>sp|P58939|CARB_CORGL Carbamoyl-phosphate synthase large chain
OS=Corynebacterium glutamicum GN=carB PE=3 SV=1
Length = 1113

Score = 31.6 bits (70), Expect = 2.6
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1

Query: 293 IDLNF*KPDVLEEIDP*GFFDVEAYAITP-FLLVGGGSTLALPLSARFVFDSCDFCNSES 117
+D F D+L E G D++ A+ P F G TL L L R VF + D C +E
Sbjct: 485 VDAPFLNEDLLREAKFMGLSDLQIAALRPEFAGEDGVRTLRLSLGIRPVFKTVDTCAAEF 544

Query: 116 SINGTYTY 93
Y Y
Sbjct: 545 EAKTPYHY 552


>sp|P36181|HSP80_SOLLC Heat shock cognate protein 80 OS=Solanum
lycopersicum GN=HSC80 PE=2 SV=1
Length = 699

Score = 31.2 bits (69), Expect = 3.4
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +1

Query: 352 KYSRKQRKVKEVFVQSSFIEVNDPIWIKDMKSTQKDKHMGW---ITSKW 489
K +K++KVKEV + S + PIW++ + K+++ + +T+ W
Sbjct: 243 KEEKKKKKVKEVSNEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDW 291


>sp|Q8IVF2|AHNK2_HUMAN Protein AHNAK2 OS=Homo sapiens GN=AHNAK2 PE=1
SV=2
Length = 5795

Score = 30.4 bits (67), Expect = 5.7
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1

Query: 136 SQESKTNLADKGKAKVDPPPTSKKGVI 216
SQE+ T LAD+G+A D P + K G++
Sbjct: 5619 SQEATTPLADEGRAPKDKPESKKSGLL 5645


>sp|P51819|HSP83_IPONI Heat shock protein 83 OS=Ipomoea nil
GN=HSP83A PE=2 SV=1
Length = 703

Score = 30.0 bits (66), Expect = 7.5
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1

Query: 352 KYSRKQRKVKEVFVQSSFIEVNDPIWIKDMKSTQKDKHMGW---ITSKW 489
K +K++K+KEV + I PIW++ + K+++ + +T+ W
Sbjct: 248 KEGKKKKKIKEVSHEWQLINKQKPIWLRKPEEITKEEYASFYKSLTNDW 296


>sp|P36182|HSP82_TOBAC Heat shock protein 82 (Fragment) OS=Nicotiana
tabacum GN=HSP82 PE=2 SV=1
Length = 499

Score = 30.0 bits (66), Expect = 7.5
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +1

Query: 352 KYSRKQRKVKEVFVQSSFIEVNDPIWIKDMKSTQKDKHMGW---ITSKW 489
K K++K+KEV + I PIW++ + KD++ + +T+ W
Sbjct: 44 KEKGKKKKIKEVSHEWQLINKQKPIWLRKPEEITKDEYASFYKSLTNDW 92


>sp|Q97CR9|SYV_THEVO Valyl-tRNA synthetase OS=Thermoplasma volcanium
GN=valS PE=3 SV=1
Length = 790

Score = 29.6 bits (65), Expect = 9.8
Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1

Query: 355 YSRKQRKVKEVFVQSSFIEVNDPI-WIKDMKSTQKDKHMGWITSKWSLKEQEYYGGNRQI 531
+ KQ ++ + ++ FI+ + WI D T+ + + + W + Q YYG +
Sbjct: 345 FIEKQWFIRYLDLKKDFIDSGRAVKWIPDYMRTRYENWVNGLKWDWCISRQRYYGVPFPV 404

Query: 532 W 534
W
Sbjct: 405 W 405


>sp|Q0J4P2|HSP81_ORYSJ Heat shock protein 81-1 OS=Oryza sativa
subsp. japonica GN=HSP81-1 PE=2 SV=2
Length = 699

Score = 29.6 bits (65), Expect = 9.8
Identities = 12/46 (26%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +1

Query: 361 RKQRKVKEVFVQSSFIEVNDPIWIKDMKSTQKDKHMGW---ITSKW 489
+K++K+KEV + S + PIW++ + K+++ + +T+ W
Sbjct: 248 KKKKKIKEVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDW 293


>sp|A2YWQ1|HSP81_ORYSI Heat shock protein 81-1 OS=Oryza sativa
subsp. indica GN=HSP81-1 PE=2 SV=1
Length = 699

Score = 29.6 bits (65), Expect = 9.8
Identities = 12/46 (26%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +1

Query: 361 RKQRKVKEVFVQSSFIEVNDPIWIKDMKSTQKDKHMGW---ITSKW 489
+K++K+KEV + S + PIW++ + K+++ + +T+ W
Sbjct: 248 KKKKKIKEVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDW 293


>sp|P27323|HSP81_ARATH Heat shock protein 81-1 OS=Arabidopsis
thaliana GN=HSP81-1 PE=2 SV=3
Length = 700

Score = 29.6 bits (65), Expect = 9.8
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1

Query: 352 KYSRKQRKVKEVFVQSSFIEVNDPIWIKDMKSTQKDKHMGW---ITSKW 489
K +K++K+KEV + I PIW++ + K+++ + +T+ W
Sbjct: 244 KDGKKKKKIKEVSHEWELINKQKPIWLRKPEEITKEEYAAFYKSLTNDW 292


tr_hit_id Q8I8Z0
Definition tr|Q8I8Z0|Q8I8Z0_9EUGL Heat shock protein 90 (Fragment) OS=Neobodo saliens
Align length 49
Score (bit) 34.3
E-value 4.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913303|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_G07.
(539 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8I8Z0|Q8I8Z0_9EUGL Heat shock protein 90 (Fragment) OS=Neobo... 34 4.3
tr|A3E2G1|A3E2G1_9EUGL Hsp90 (Fragment) OS=Entosiphon sulcatum P... 34 5.6
tr|A3E2F9|A3E2F9_9EUGL Hsp90 (Fragment) OS=Peranema trichophorum... 34 5.6
tr|Q6TPJ3|Q6TPJ3_9CILI Heat shock protein 90 (Fragment) OS=Bleph... 34 5.6
tr|B2V2M1|B2V2M1_CLOBA Peptidoglycan-binding LysM OS=Clostridium... 33 7.3
tr|A0CMG0|A0CMG0_PARTE Chromosome undetermined scaffold_21, whol... 33 7.3
tr|Q6WGI6|Q6WGI6_EUGGR Heat shock protein 90 (Fragment) OS=Eugle... 33 9.5
tr|Q6WGI5|Q6WGI5_EUGGR Heat shock protein 90 (Fragment) OS=Eugle... 33 9.5

>tr|Q8I8Z0|Q8I8Z0_9EUGL Heat shock protein 90 (Fragment) OS=Neobodo
saliens GN=HSP-90 PE=4 SV=1
Length = 634

Score = 34.3 bits (77), Expect = 4.3
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1

Query: 352 KYSRKQRKVKEVFVQSSFIEVNDPIWIKDMKSTQKDKHMGW---ITSKW 489
K +K +KVKEV + + N P+W +D K K+++ + I++ W
Sbjct: 219 KQDKKTKKVKEVTKEFELLNKNKPLWTRDSKDITKEEYSAFYKAISNDW 267


>tr|A3E2G1|A3E2G1_9EUGL Hsp90 (Fragment) OS=Entosiphon sulcatum PE=4
SV=1
Length = 652

Score = 33.9 bits (76), Expect = 5.6
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1

Query: 361 RKQRKVKEVFVQSSFIEVNDPIWIKDMKSTQKDKH 465
+K++K+KEV V+ + N PIW +D K +++
Sbjct: 232 KKKKKIKEVSVEMELVNKNKPIWTRDPKDITNEEY 266


>tr|A3E2F9|A3E2F9_9EUGL Hsp90 (Fragment) OS=Peranema trichophorum
PE=4 SV=1
Length = 603

Score = 33.9 bits (76), Expect = 5.6
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +1

Query: 352 KYSRKQRKVKEVFVQSSFIEVNDPIWIKDMKSTQKDKHMGW---ITSKW 489
K S+K++KVKEV V+ N PIW +D K +++ + +++ W
Sbjct: 155 KDSKKKKKVKEVNVEFELQNKNKPIWTRDPKDITNEEYASFYKAVSNDW 203


>tr|Q6TPJ3|Q6TPJ3_9CILI Heat shock protein 90 (Fragment)
OS=Blepharisma intermedium PE=4 SV=1
Length = 563

Score = 33.9 bits (76), Expect = 5.6
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +1

Query: 346 QPKYSRKQRKVKEVFVQSSFIEVNDPIWIKDMKSTQKDKHMGW---ITSKW 489
Q K +K++K+KEV + + N PIW++ +S K+++ + +T+ W
Sbjct: 218 QEKKKKKKKKIKEVSHEFEQVNKNKPIWMRKPESITKEEYSAFYKSLTNDW 268


>tr|B2V2M1|B2V2M1_CLOBA Peptidoglycan-binding LysM OS=Clostridium
botulinum (strain Alaska E43 / type E3) GN=CLH_0894 PE=4
SV=1
Length = 220

Score = 33.5 bits (75), Expect = 7.3
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +1

Query: 352 KYSRKQRKVKEVFVQSSFIEVNDPIWIKDMKSTQKDKHMGWITSKWSLKEQEYYGGNRQI 531
++ + KV+ +F+ S F E+ND I+++K T+K +G I LK + Y NR +
Sbjct: 88 EWRQNAEKVRFIFIGSEF-EINDLFSIENLKFTEKGGEVGDIYYSIELKRYKPYYANRAV 146


>tr|A0CMG0|A0CMG0_PARTE Chromosome undetermined scaffold_21, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00008456001 PE=4 SV=1
Length = 643

Score = 33.5 bits (75), Expect = 7.3
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Frame = +1

Query: 352 KYSRKQRKVKEVFVQSSFIEVNDPIWIKDMKSTQKDKHMGW---ITSKW----SLKEQEY 510
K +K++K+KEV + + N P+W+K + K+++ + +T+ W S+K+
Sbjct: 248 KAEKKKKKIKEVSTEFEQVNKNKPLWMKKPEEITKEEYANFYKQLTNDWEEHLSVKQFSV 307

Query: 511 YGG 519
GG
Sbjct: 308 EGG 310


>tr|Q6WGI6|Q6WGI6_EUGGR Heat shock protein 90 (Fragment) OS=Euglena
gracilis PE=2 SV=1
Length = 638

Score = 33.1 bits (74), Expect = 9.5
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1

Query: 352 KYSRKQRKVKEVFVQSSFIEVNDPIWIKDMKSTQKDKHMGW---ITSKW 489
K +K++K+KEV V+ N PIW +D K +++ + I++ W
Sbjct: 220 KKDKKKKKIKEVSVEFELQNKNKPIWTRDPKDITNEEYASFYKAISNDW 268


>tr|Q6WGI5|Q6WGI5_EUGGR Heat shock protein 90 (Fragment) OS=Euglena
gracilis PE=2 SV=1
Length = 638

Score = 33.1 bits (74), Expect = 9.5
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1

Query: 352 KYSRKQRKVKEVFVQSSFIEVNDPIWIKDMKSTQKDKHMGW---ITSKW 489
K +K++K+KEV V+ N PIW +D K +++ + I++ W
Sbjct: 220 KKDKKKKKIKEVSVEFELRNKNKPIWTRDPKDITNEEYASFYEAISNDW 268