BP913305
Clone id YMU001_000028_G09
Library
Length 584
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000028_G09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTCCTAAGTGGCATACTTGTCTCCCTTAAATGGATCTTTCCATCCTTAATAAACACACGA
CCTCTCTTCAAAGCATCATTGTAGCTACCACAATCTCTTCTACAATGATTTGTGCTATCA
CACCATATGCATCTATGCACGAAGCCTTCTGTACTTTGGGATTTTTGTTTGGAAGATTGC
CCTTTCTCTTGAAGCGTGACCAACTTTAATTTCGGTCTCGTATGCCCTTCACAACCTCAT
CAAGTATATAATTATCGCCTTTTGGAATCACAATAGCGGGCTTTGTTGAAATCTTAGGCA
TGCTAGAGGTAGGAGTAGCACCTTCACCACTGTCTTGTATCTACGTCGTTGCCTCTTAAC
AAGCAATGAGACCACATCTTCAACCTTCCTCCACTCGGCCTTAAACCTTGTTCTGGATTC
TTGTCTTTAAATAGTGACGCTTAAGTTGAATGGGAGTTCAAGACTTGCAGCTTGAAGAAA
TAATTCAGTCTTTTCATTTCTCAAAGTGAAATCGCTCTATTCTCAACAATTGAGGAGGTC
ACTCAAACTCCCTTAGCGGTTCAGTGATAGAAAGCCCTTCTTTT
■■Homology search results ■■ -
sp_hit_id Q8SQP3
Definition sp|Q8SQP3|H3L_ENCCU Histone H3-like protein OS=Encephalitozoon cuniculi
Align length 67
Score (bit) 30.8
E-value 5.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913305|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_G09.
(584 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8SQP3|H3L_ENCCU Histone H3-like protein OS=Encephalitozoon c... 31 5.2

>sp|Q8SQP3|H3L_ENCCU Histone H3-like protein OS=Encephalitozoon
cuniculi GN=ECU09_0450 PE=3 SV=1
Length = 140

Score = 30.8 bits (68), Expect = 5.2
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Frame = -3

Query: 414 RTRFKA------EWRKVEDVVSLLVKRQRRRYKTVVKVLLLPLACLRFQQSPLL*FQKAI 253
RTRFKA E RK + LL+++ R ++ +V+ L +RFQ S ++ FQ+A+
Sbjct: 38 RTRFKAGALALKEIRKYQKSTDLLIRK--RPFQRMVRDLCKGREGVRFQASAIVAFQEAV 95

Query: 252 IIYLMRL 232
+L L
Sbjct: 96 ENFLTSL 102


tr_hit_id A9TC30
Definition tr|A9TC30|A9TC30_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 48
Score (bit) 60.8
E-value 3.0e-18
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913305|Adiantum capillus-veneris mRNA, clone:
YMU001_000028_G09.
(584 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TC30|A9TC30_PHYPA Predicted protein OS=Physcomitrella paten... 61 3e-18
tr|A9RCF3|A9RCF3_PHYPA Predicted protein OS=Physcomitrella paten... 61 1e-17
tr|A9RRN6|A9RRN6_PHYPA Predicted protein OS=Physcomitrella paten... 57 2e-16
tr|A9TGP5|A9TGP5_PHYPA Predicted protein OS=Physcomitrella paten... 56 2e-16
tr|A9RJ89|A9RJ89_PHYPA Predicted protein OS=Physcomitrella paten... 55 3e-16
tr|A9RBM5|A9RBM5_PHYPA Predicted protein OS=Physcomitrella paten... 56 5e-16
tr|A9TSB7|A9TSB7_PHYPA Predicted protein OS=Physcomitrella paten... 59 7e-16
tr|A9TS49|A9TS49_PHYPA Predicted protein OS=Physcomitrella paten... 57 7e-16
tr|A9T6M0|A9T6M0_PHYPA Predicted protein OS=Physcomitrella paten... 55 7e-16
tr|A9RZ02|A9RZ02_PHYPA Predicted protein OS=Physcomitrella paten... 59 7e-16
tr|A9SUB9|A9SUB9_PHYPA Predicted protein OS=Physcomitrella paten... 56 7e-16
tr|A9S8Z8|A9S8Z8_PHYPA Predicted protein OS=Physcomitrella paten... 57 9e-16
tr|A9T400|A9T400_PHYPA Predicted protein OS=Physcomitrella paten... 54 2e-15
tr|A9T3X0|A9T3X0_PHYPA Predicted protein OS=Physcomitrella paten... 57 2e-15
tr|A9TRE2|A9TRE2_PHYPA Predicted protein OS=Physcomitrella paten... 59 2e-15
tr|A9RI69|A9RI69_PHYPA Predicted protein OS=Physcomitrella paten... 57 2e-15
tr|A9TID4|A9TID4_PHYPA Predicted protein OS=Physcomitrella paten... 60 2e-15
tr|A9SBL6|A9SBL6_PHYPA Predicted protein OS=Physcomitrella paten... 53 2e-15
tr|A9T0E1|A9T0E1_PHYPA Predicted protein OS=Physcomitrella paten... 57 2e-15
tr|A9S1A9|A9S1A9_PHYPA Predicted protein OS=Physcomitrella paten... 57 2e-15
tr|A9TLL2|A9TLL2_PHYPA Predicted protein OS=Physcomitrella paten... 61 2e-15
tr|A9RB92|A9RB92_PHYPA Predicted protein OS=Physcomitrella paten... 59 2e-15
tr|A9TMG2|A9TMG2_PHYPA Predicted protein OS=Physcomitrella paten... 57 2e-15
tr|A9U037|A9U037_PHYPA Predicted protein OS=Physcomitrella paten... 57 2e-15
tr|A9TY46|A9TY46_PHYPA Predicted protein OS=Physcomitrella paten... 57 2e-15
tr|A9U5L2|A9U5L2_PHYPA Predicted protein (Fragment) OS=Physcomit... 57 2e-15
tr|A9U4G0|A9U4G0_PHYPA Predicted protein OS=Physcomitrella paten... 55 3e-15
tr|A9SIP6|A9SIP6_PHYPA Predicted protein OS=Physcomitrella paten... 57 3e-15
tr|A9S8F7|A9S8F7_PHYPA Predicted protein OS=Physcomitrella paten... 58 3e-15
tr|A9TI61|A9TI61_PHYPA Predicted protein OS=Physcomitrella paten... 57 3e-15

>tr|A9TC30|A9TC30_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_90813 PE=4 SV=1
Length = 423

Score = 60.8 bits (146), Expect(3) = 3e-18
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = -1

Query: 149 EGFVHRCIWCDSTNHCRRDCGSYNDALKRGRVFIKDGKIHLRETSMPL 6
EG VHRC+WCD+ +H RR+C + +AL +G VF KDG +H +E L
Sbjct: 213 EGVVHRCMWCDNIDHSRRECEEFTEALCKGVVFFKDGMMHSKENGEKL 260



Score = 41.2 bits (95), Expect(3) = 3e-18
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = -3

Query: 504 LRNEKTELFLQAASLELPFNLSVTI*RQESRTRFKAEWRKVEDVVSLLVKRQRRR 340
L + K ELFLQAA +L L + +E W +VEDVV ++ KR++R+
Sbjct: 84 LDSSKVELFLQAADGKLQDKLEFMLEDKEEDEGLTTNWERVEDVVRMMTKREKRK 138



Score = 32.3 bits (72), Expect(3) = 3e-18
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = -2

Query: 310 TSSMPKISTKPAIVIPKGDNYILDEVVKGIRDRN*SWSRFKRKGNLPNKNPK 155
+S P +P+IV K + +DE+++G+RD +++ + KG P + K
Sbjct: 155 SSIHPTSLIQPSIVTSKKEETGIDEIIRGMRDLQIKFAKLEEKGQSPRISTK 206


>tr|A9RCF3|A9RCF3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_64503 PE=4 SV=1
Length = 643

Score = 60.8 bits (146), Expect(3) = 1e-17
Identities = 24/43 (55%), Positives = 32/43 (74%)
Frame = -1

Query: 146 GFVHRCIWCDSTNHCRRDCGSYNDALKRGRVFIKDGKIHLRET 18
G++ RCIWCDS H RR+CG + D L++G + KDGKI LR+T
Sbjct: 180 GYIQRCIWCDSMEHPRRECGDFIDILRQGVILWKDGKIALRDT 222



Score = 47.4 bits (111), Expect(3) = 1e-17
Identities = 24/62 (38%), Positives = 35/62 (56%)
Frame = -3

Query: 507 TLRNEKTELFLQAASLELPFNLSVTI*RQESRTRFKAEWRKVEDVVSLLVKRQRRRYKTV 328
TL N+K ELFLQ+A +L L + + +W+KV + V +L KR+ RR K V
Sbjct: 47 TLENDKIELFLQSADNDLQRELELLLEDNTEDNGLTTDWKKVSEAVGILAKREYRRGKVV 106

Query: 327 VK 322
V+
Sbjct: 107 VR 108



Score = 24.3 bits (51), Expect(3) = 1e-17
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = -2

Query: 325 EGATPTSSMPKISTKPAIVIPKGDNYILDEVVKGIRDRN*SWSRFKRKGNLP 170
E A P ++P + + P+ D +DE+VKG++D ++ + K LP
Sbjct: 125 EPAIPVKTIP---IPMSTIAPQKD--AIDELVKGMKDFQIKLAKLEEKERLP 171


>tr|A9RRN6|A9RRN6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_69705 PE=4 SV=1
Length = 896

Score = 57.0 bits (136), Expect(3) = 2e-16
Identities = 20/43 (46%), Positives = 32/43 (74%)
Frame = -1

Query: 149 EGFVHRCIWCDSTNHCRRDCGSYNDALKRGRVFIKDGKIHLRE 21
+G+V RCIWCD +H R+DC +N+ +++G + KDGKI L++
Sbjct: 358 QGYVQRCIWCDDASHTRKDCNEFNNMIRQGIICWKDGKIALKD 400



Score = 43.9 bits (102), Expect(3) = 2e-16
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = -3

Query: 507 TLRNEKTELFLQAASLELPFNLSVTI*RQESRTRFKAEWRKVEDVVSLLVKRQRRR 340
TL ++K +LFLQAA EL L + +E +W+ VED V LL K++R++
Sbjct: 231 TLESKKVDLFLQAADGELQEKLEPLLEDKEEDEGLTTKWKNVEDAVGLLTKKERKK 286



Score = 27.7 bits (60), Expect(3) = 2e-16
Identities = 12/50 (24%), Positives = 29/50 (58%)
Frame = -2

Query: 316 TPTSSMPKISTKPAIVIPKGDNYILDEVVKGIRDRN*SWSRFKRKGNLPN 167
T +MP + +P+ + K + +++E+++G+RD +RF+ ++ N
Sbjct: 304 TTPPTMPTV--QPSTSLSKKADMVMEEIIRGMRDLQIKLARFEENTSINN 351


>tr|A9TGP5|A9TGP5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_92532 PE=4 SV=1
Length = 855

Score = 56.2 bits (134), Expect(3) = 2e-16
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = -1

Query: 149 EGFVHRCIWCDSTNHCRRDCGSYNDALKRGRVFIKDGKIHLRE 21
+G+V RCIWCD +H R+DC +N +++G + KDGKI L++
Sbjct: 339 QGYVQRCIWCDDASHTRKDCNEFNTMIRQGIICWKDGKIALKD 381



Score = 47.4 bits (111), Expect(3) = 2e-16
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = -3

Query: 507 TLRNEKTELFLQAASLELPFNLSVTI*RQESRTRFKAEWRKVEDVVSLLVKRQRRRYKT- 331
TL K +LFLQ A EL L + + +E +W+ VEDVV LL KR+RR+ ++
Sbjct: 212 TLELNKVDLFLQVADGELQGKLELLLEDKEEDEGLTTKWKNVEDVVGLLTKRERRKDRSN 271

Query: 330 VVKVLLLPLACLR 292
+ K + P A +R
Sbjct: 272 IPKTVQAPKAPIR 284



Score = 25.0 bits (53), Expect(3) = 2e-16
Identities = 12/50 (24%), Positives = 28/50 (56%)
Frame = -2

Query: 316 TPTSSMPKISTKPAIVIPKGDNYILDEVVKGIRDRN*SWSRFKRKGNLPN 167
T +MP + +P+ + K + ++E+++G+RD +RF+ ++ N
Sbjct: 285 TTPPTMPTV--QPSTSLSKKADMGMEEIIRGMRDLQIKLARFEENTSINN 332


>tr|A9RJ89|A9RJ89_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_66857 PE=4 SV=1
Length = 631

Score = 54.7 bits (130), Expect(3) = 3e-16
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = -1

Query: 143 FVHRCIWCDSTNHCRRDCGSYNDALKRGRVFIKDGKIHLRET 18
++ RCIWCDS + +R+CG + D L++G + KDGKI LR+T
Sbjct: 281 YIQRCIWCDSMEYPQRECGDFIDILRQGVILWKDGKIALRDT 322



Score = 47.8 bits (112), Expect(3) = 3e-16
Identities = 24/62 (38%), Positives = 35/62 (56%)
Frame = -3

Query: 507 TLRNEKTELFLQAASLELPFNLSVTI*RQESRTRFKAEWRKVEDVVSLLVKRQRRRYKTV 328
TL N+K ELFLQ+A +L L + + +W+KV + V +L KR+ RR K V
Sbjct: 147 TLENDKVELFLQSAGNDLQRELELLLEDNTEDNGLTTDWKKVSEAVGILAKREYRRGKVV 206

Query: 327 VK 322
V+
Sbjct: 207 VR 208



Score = 25.4 bits (54), Expect(3) = 3e-16
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 11/59 (18%)
Frame = -2

Query: 313 PTSSMPKISTKPAI-----------VIPKGDNYILDEVVKGIRDRN*SWSRFKRKGNLP 170
PT++ + KPAI + P+ D +DE+VKG++D ++ + K LP
Sbjct: 215 PTTTSCRQQPKPAIPVRTIPIPMSTIAPQKD--AIDELVKGMKDLQIKLAKLEEKERLP 271


>tr|A9RBM5|A9RBM5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_63958 PE=4 SV=1
Length = 253

Score = 56.2 bits (134), Expect(3) = 5e-16
Identities = 24/70 (34%), Positives = 42/70 (60%)
Frame = -1

Query: 212 KLKLVTLXXXXXXXXXXXXSTEGFVHRCIWCDSTNHCRRDCGSYNDALKRGRVFIKDGKI 33
++KLV+L S +G+V RCIWCD +H ++DC +N+ + + + +KDGKI
Sbjct: 156 QIKLVSLEENTSTNNLKNVSKQGYVQRCIWCDDASHTKKDCDEFNNMIWQEVICLKDGKI 215

Query: 32 HLRETSMPLR 3
L++ + L+
Sbjct: 216 ALKDMEVLLK 225



Score = 43.9 bits (102), Expect(3) = 5e-16
Identities = 24/56 (42%), Positives = 30/56 (53%)
Frame = -3

Query: 507 TLRNEKTELFLQAASLELPFNLSVTI*RQESRTRFKAEWRKVEDVVSLLVKRQRRR 340
TL K ELF QAA EL L + + E +W+ VE V LLVKR+RR+
Sbjct: 50 TLEPNKVELFFQAADRELQGKLELLLEDIEEDEGLTTKWKNVESAVGLLVKRERRK 105



Score = 26.9 bits (58), Expect(3) = 5e-16
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -2

Query: 316 TPTSSMPKISTKPAIVIPKGDNYILDEVVKGIRD 215
T +MP I +P+ +PK N ++E+++G+RD
Sbjct: 123 TTRRTMPAI--QPSTSLPKKANMEIEEIIRGMRD 154


>tr|A9TSB7|A9TSB7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_96497 PE=4 SV=1
Length = 984

Score = 59.3 bits (142), Expect(2) = 7e-16
Identities = 24/64 (37%), Positives = 39/64 (60%)
Frame = -1

Query: 212 KLKLVTLXXXXXXXXXXXXSTEGFVHRCIWCDSTNHCRRDCGSYNDALKRGRVFIKDGKI 33
++KL L S +G+V RCIWCD +H R+DC +N+ +++G ++ KDGKI
Sbjct: 336 QIKLARLEENTSINNSKNISKQGYVQRCIWCDDASHTRKDCNEFNNMIRQGIIYWKDGKI 395

Query: 32 HLRE 21
L++
Sbjct: 396 ALKD 399



Score = 47.4 bits (111), Expect(2) = 7e-16
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = -3

Query: 507 TLRNEKTELFLQAASLELPFNLSVTI*RQESRTRFKAEWRKVEDVVSLLVKRQRRRYKT- 331
TL +K +LFLQAA EL L + + +E +W+ VED V LL K++RR+ ++
Sbjct: 230 TLEPKKVDLFLQAADGELQEKLELLLENKEEDEGLTTKWKNVEDAVGLLTKKERRKDRSN 289

Query: 330 VVKVLLLPLACLR 292
+ K + P A +R
Sbjct: 290 IPKTVQAPKAQVR 302


>tr|A9TS49|A9TS49_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_96471 PE=4 SV=1
Length = 852

Score = 57.4 bits (137), Expect(2) = 7e-16
Identities = 24/64 (37%), Positives = 38/64 (59%)
Frame = -1

Query: 212 KLKLVTLXXXXXXXXXXXXSTEGFVHRCIWCDSTNHCRRDCGSYNDALKRGRVFIKDGKI 33
++KL L S +G+V RCIWCD +H R+DC +N+ +++G + KDGKI
Sbjct: 244 QIKLARLEENTSTNNLKNVSKQGYVQRCIWCDDASHTRKDCNEFNNMIRQGIICWKDGKI 303

Query: 32 HLRE 21
L++
Sbjct: 304 ALKD 307



Score = 49.3 bits (116), Expect(2) = 7e-16
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = -3

Query: 507 TLRNEKTELFLQAASLELPFNLSVTI*RQESRTRFKAEWRKVEDVVSLLVKRQRRRYKT- 331
TL K +LFLQAA EL L + + +E A+W+ +ED + LL KR+RR+ ++
Sbjct: 138 TLEPNKVDLFLQAADGELQGKLELLLEDKEEDEGLTAKWKNIEDAMGLLTKRERRKDRSN 197

Query: 330 VVKVLLLPLACLR 292
+ K++ P A +R
Sbjct: 198 IPKIVQAPKALVR 210


>tr|A9T6M0|A9T6M0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_88773 PE=4 SV=1
Length = 552

Score = 55.5 bits (132), Expect(2) = 7e-16
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = -1

Query: 212 KLKLVTLXXXXXXXXXXXXSTEGFVHRCIWCDSTNHCRRDCGSYNDALKRGRVFIKDGKI 33
++KL L S +G+V RCIWCD +H R+DC +N+ + +G + KDGKI
Sbjct: 287 QIKLAKLEENTSTNNSKNVSKQGYVQRCIWCDDASHTRKDCNEFNNMIWQGIICWKDGKI 346

Query: 32 HLRE 21
L++
Sbjct: 347 ALKD 350



Score = 51.2 bits (121), Expect(2) = 7e-16
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = -3

Query: 507 TLRNEKTELFLQAASLELPFNLSVTI*RQESRTRFKAEWRKVEDVVSLLVKRQRRRYKT- 331
TL K +LFLQAA EL L + + +E +W+ VEDVV LL KR+RR+ ++
Sbjct: 181 TLEPNKVDLFLQAADRELQGKLELLLEDKEEDEGLTTKWKNVEDVVELLTKRERRKDRSN 240

Query: 330 VVKVLLLPLACLR 292
+ K++ P A +R
Sbjct: 241 IPKIVQAPKAPIR 253


>tr|A9RZ02|A9RZ02_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_72323 PE=4 SV=1
Length = 284

Score = 59.3 bits (142), Expect(2) = 7e-16
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = -1

Query: 212 KLKLVTLXXXXXXXXXXXXSTEGFVHRCIWCDSTNHCRRDCGSYNDALKRGRVFIKDGKI 33
++KL L S EG++ RCIWCD +H R+DC +N+ +++G + KDGKI
Sbjct: 192 QIKLARLEENTSTNNSKNISKEGYIQRCIWCDDASHTRKDCNEFNNMIRQGIICWKDGKI 251

Query: 32 HLRET 18
L+ T
Sbjct: 252 ALKNT 256



Score = 47.4 bits (111), Expect(2) = 7e-16
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = -3

Query: 507 TLRNEKTELFLQAASLELPFNLSVTI*RQESRTRFKAEWRKVEDVVSLLVKRQRRR-YKT 331
T K +LFLQAA EL L + + +E +W+ VED V LL KR+RR+ +
Sbjct: 86 TFEPNKVDLFLQAADGELQGKLKLLLQDKEEDEGLTTKWKNVEDAVGLLTKRERRKDRRN 145

Query: 330 VVKVLLLPLACLR 292
++K + P A +R
Sbjct: 146 ILKTIQAPKAPVR 158