BP913320
Clone id YMU001_000029_A01
Library
Length 344
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000029_A01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ACCACAAGATGATCCAAGATGGGCCTCGGGCTACGTTCTATGGGTTTTAAAGCTAGTAAA
ATAGTGGAAAATGTAGGCACCATTCCACTGCGGCCGGTAAAAATTGATTGTTTGGTTACT
GAGGATGAGGCCTCTTCAGATGAGGTTGAGTCAGGTGATGAATTTGTGTTTACTGACAGT
GAAAGGGAAGCTGAAGGAAAAAGCATTACTTGAAGTTGTCAGTGCTAATGAATAGAGTAT
CTTTGTGATGTTCAAGAGTGGGTACTGTTTATATTCTTGGTGTTATCTGCATGGTTATTC
CTTGATAATGTTGGGGGTTATTCATTAAGATATCAGCTCATTGA
■■Homology search results ■■ -
sp_hit_id P13368
Definition sp|P13368|7LESS_DROME Protein sevenless OS=Drosophila melanogaster
Align length 54
Score (bit) 31.2
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913320|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_A01.
(344 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P13368|7LESS_DROME Protein sevenless OS=Drosophila melanogast... 31 1.7
sp|P35521|ICLN_CANFA Methylosome subunit pICln OS=Canis familiar... 30 3.7
sp|Q9ZKC0|TRUA_HELPJ tRNA pseudouridine synthase A OS=Helicobact... 30 4.9
sp|Q74ZJ8|SEC16_ASHGO COPII coat assembly protein SEC16 OS=Ashby... 30 4.9
sp|Q04753|ICLN_RAT Methylosome subunit pICln OS=Rattus norvegicu... 30 4.9
sp|Q61189|ICLN_MOUSE Methylosome subunit pICln OS=Mus musculus G... 30 4.9
sp|Q255A9|RNH2_CHLFF Ribonuclease HII OS=Chlamydophila felis (st... 29 8.3
sp|Q5R719|ICLN_PONAB Methylosome subunit pICln OS=Pongo abelii G... 29 8.3
sp|P54105|ICLN_HUMAN Methylosome subunit pICln OS=Homo sapiens G... 29 8.3

>sp|P13368|7LESS_DROME Protein sevenless OS=Drosophila melanogaster
GN=sev PE=1 SV=2
Length = 2554

Score = 31.2 bits (69), Expect = 1.7
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -2

Query: 184 FHCQ*TQIHHL---TQPHLKRPHPQ*PNNQFLPAAVEWCLHFPLFY*L*NP*NV 32
+H Q I HL TQP L+R P+ + Q P + W +HFP Y P N+
Sbjct: 298 WHLQRLAISHLVERTQPQLERA-PR-ADGQSTPLTIRWAMHFPEHYLASRPFNI 349


>sp|P35521|ICLN_CANFA Methylosome subunit pICln OS=Canis familiaris
GN=CLNS1A PE=1 SV=1
Length = 235

Score = 30.0 bits (66), Expect = 3.7
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1

Query: 115 VTEDEASSDEVESGDEFVFTDSEREAEGKSIT*SCQC 225
V E+E S D+VE EF F S++ A T C+C
Sbjct: 94 VAEEEDSDDDVEPIAEFRFVPSDKSALEAMFTAMCEC 130


>sp|Q9ZKC0|TRUA_HELPJ tRNA pseudouridine synthase A OS=Helicobacter
pylori J99 GN=truA PE=3 SV=1
Length = 242

Score = 29.6 bits (65), Expect = 4.9
Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = -3

Query: 135 RGLILSNQTINFYRPQ-WNGAYIFHY 61
+G+ +NQ ++F+ P+ WN A +FHY
Sbjct: 52 KGVHANNQALSFHAPKHWNAAKLFHY 77


>sp|Q74ZJ8|SEC16_ASHGO COPII coat assembly protein SEC16 OS=Ashbya
gossypii GN=SEC16 PE=3 SV=1
Length = 2272

Score = 29.6 bits (65), Expect = 4.9
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = -3

Query: 321 ITPNIIKE*PCR*HQ-EYKQYPLLN---ITKILYSLALTTSSNAFSFSFPFTVS 172
+ P I+E P H ++Q+PL N +KI+Y L+L + + PF VS
Sbjct: 1011 VLPPTIQEVPVDGHALNFRQFPLFNWSQTSKIVYGLSLPIDTGNYMLGKPFPVS 1064


>sp|Q04753|ICLN_RAT Methylosome subunit pICln OS=Rattus norvegicus
GN=Clns1a PE=2 SV=1
Length = 236

Score = 29.6 bits (65), Expect = 4.9
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1

Query: 121 EDEASSDEVESGDEFVFTDSEREAEGKSIT*SCQC 225
EDE +D+VE EF F S++ A T C+C
Sbjct: 97 EDEDDNDDVEPISEFRFVPSDKSALEAMFTAMCEC 131


>sp|Q61189|ICLN_MOUSE Methylosome subunit pICln OS=Mus musculus
GN=Clns1a PE=1 SV=1
Length = 236

Score = 29.6 bits (65), Expect = 4.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1

Query: 121 EDEASSDEVESGDEFVFTDSEREAEGKSIT*SCQC 225
EDE +D++E EF F S++ A T C+C
Sbjct: 97 EDEEDNDDIEPISEFRFVPSDKSALEAMFTAMCEC 131


>sp|Q255A9|RNH2_CHLFF Ribonuclease HII OS=Chlamydophila felis
(strain Fe/C-56) GN=rnhB PE=3 SV=1
Length = 209

Score = 28.9 bits (63), Expect = 8.3
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = -2

Query: 334 DILMNNPQHYQGITMQITPRI*TVPTLEHHKDTLFISTDNFK*CFFLQLPFHCQ*TQIHH 155
DIL+N+P Y GI + RI + LE K+ + ++ N LP H +
Sbjct: 75 DILVNDPDVYYGIGVVSVERIDEINILEATKEAMAVAIAN--------LPVHPDFLLVDG 126

Query: 154 LTQPH 140
L PH
Sbjct: 127 LHLPH 131


>sp|Q5R719|ICLN_PONAB Methylosome subunit pICln OS=Pongo abelii
GN=CLNS1A PE=2 SV=1
Length = 237

Score = 28.9 bits (63), Expect = 8.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1

Query: 121 EDEASSDEVESGDEFVFTDSEREAEGKSIT*SCQC 225
E+E S D+VE EF F S++ A T C+C
Sbjct: 98 EEEDSDDDVEPITEFRFVPSDKSALEAMFTAMCEC 132


>sp|P54105|ICLN_HUMAN Methylosome subunit pICln OS=Homo sapiens
GN=CLNS1A PE=1 SV=1
Length = 237

Score = 28.9 bits (63), Expect = 8.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1

Query: 121 EDEASSDEVESGDEFVFTDSEREAEGKSIT*SCQC 225
E+E S D+VE EF F S++ A T C+C
Sbjct: 98 EEEDSDDDVEPITEFRFVPSDKSALEAMFTAMCEC 132


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913320|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_A01.
(344 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******