BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913320|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_A01.
         (344 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P13368|7LESS_DROME Protein sevenless OS=Drosophila melanogast...    31   1.7  
sp|P35521|ICLN_CANFA Methylosome subunit pICln OS=Canis familiar...    30   3.7  
sp|Q9ZKC0|TRUA_HELPJ tRNA pseudouridine synthase A OS=Helicobact...    30   4.9  
sp|Q74ZJ8|SEC16_ASHGO COPII coat assembly protein SEC16 OS=Ashby...    30   4.9  
sp|Q04753|ICLN_RAT Methylosome subunit pICln OS=Rattus norvegicu...    30   4.9  
sp|Q61189|ICLN_MOUSE Methylosome subunit pICln OS=Mus musculus G...    30   4.9  
sp|Q255A9|RNH2_CHLFF Ribonuclease HII OS=Chlamydophila felis (st...    29   8.3  
sp|Q5R719|ICLN_PONAB Methylosome subunit pICln OS=Pongo abelii G...    29   8.3  
sp|P54105|ICLN_HUMAN Methylosome subunit pICln OS=Homo sapiens G...    29   8.3  

>sp|P13368|7LESS_DROME Protein sevenless OS=Drosophila melanogaster
           GN=sev PE=1 SV=2
          Length = 2554

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = -2

Query: 184 FHCQ*TQIHHL---TQPHLKRPHPQ*PNNQFLPAAVEWCLHFPLFY*L*NP*NV 32
           +H Q   I HL   TQP L+R  P+  + Q  P  + W +HFP  Y    P N+
Sbjct: 298 WHLQRLAISHLVERTQPQLERA-PR-ADGQSTPLTIRWAMHFPEHYLASRPFNI 349


>sp|P35521|ICLN_CANFA Methylosome subunit pICln OS=Canis familiaris
           GN=CLNS1A PE=1 SV=1
          Length = 235

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +1

Query: 115 VTEDEASSDEVESGDEFVFTDSEREAEGKSIT*SCQC 225
           V E+E S D+VE   EF F  S++ A     T  C+C
Sbjct: 94  VAEEEDSDDDVEPIAEFRFVPSDKSALEAMFTAMCEC 130


>sp|Q9ZKC0|TRUA_HELPJ tRNA pseudouridine synthase A OS=Helicobacter
           pylori J99 GN=truA PE=3 SV=1
          Length = 242

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -3

Query: 135 RGLILSNQTINFYRPQ-WNGAYIFHY 61
           +G+  +NQ ++F+ P+ WN A +FHY
Sbjct: 52  KGVHANNQALSFHAPKHWNAAKLFHY 77


>sp|Q74ZJ8|SEC16_ASHGO COPII coat assembly protein SEC16 OS=Ashbya
            gossypii GN=SEC16 PE=3 SV=1
          Length = 2272

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
 Frame = -3

Query: 321  ITPNIIKE*PCR*HQ-EYKQYPLLN---ITKILYSLALTTSSNAFSFSFPFTVS 172
            + P  I+E P   H   ++Q+PL N    +KI+Y L+L   +  +    PF VS
Sbjct: 1011 VLPPTIQEVPVDGHALNFRQFPLFNWSQTSKIVYGLSLPIDTGNYMLGKPFPVS 1064


>sp|Q04753|ICLN_RAT Methylosome subunit pICln OS=Rattus norvegicus
           GN=Clns1a PE=2 SV=1
          Length = 236

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 121 EDEASSDEVESGDEFVFTDSEREAEGKSIT*SCQC 225
           EDE  +D+VE   EF F  S++ A     T  C+C
Sbjct: 97  EDEDDNDDVEPISEFRFVPSDKSALEAMFTAMCEC 131


>sp|Q61189|ICLN_MOUSE Methylosome subunit pICln OS=Mus musculus
           GN=Clns1a PE=1 SV=1
          Length = 236

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 121 EDEASSDEVESGDEFVFTDSEREAEGKSIT*SCQC 225
           EDE  +D++E   EF F  S++ A     T  C+C
Sbjct: 97  EDEEDNDDIEPISEFRFVPSDKSALEAMFTAMCEC 131


>sp|Q255A9|RNH2_CHLFF Ribonuclease HII OS=Chlamydophila felis
           (strain Fe/C-56) GN=rnhB PE=3 SV=1
          Length = 209

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 20/65 (30%), Positives = 29/65 (44%)
 Frame = -2

Query: 334 DILMNNPQHYQGITMQITPRI*TVPTLEHHKDTLFISTDNFK*CFFLQLPFHCQ*TQIHH 155
           DIL+N+P  Y GI +    RI  +  LE  K+ + ++  N        LP H     +  
Sbjct: 75  DILVNDPDVYYGIGVVSVERIDEINILEATKEAMAVAIAN--------LPVHPDFLLVDG 126

Query: 154 LTQPH 140
           L  PH
Sbjct: 127 LHLPH 131


>sp|Q5R719|ICLN_PONAB Methylosome subunit pICln OS=Pongo abelii
           GN=CLNS1A PE=2 SV=1
          Length = 237

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 121 EDEASSDEVESGDEFVFTDSEREAEGKSIT*SCQC 225
           E+E S D+VE   EF F  S++ A     T  C+C
Sbjct: 98  EEEDSDDDVEPITEFRFVPSDKSALEAMFTAMCEC 132


>sp|P54105|ICLN_HUMAN Methylosome subunit pICln OS=Homo sapiens
           GN=CLNS1A PE=1 SV=1
          Length = 237

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 121 EDEASSDEVESGDEFVFTDSEREAEGKSIT*SCQC 225
           E+E S D+VE   EF F  S++ A     T  C+C
Sbjct: 98  EEEDSDDDVEPITEFRFVPSDKSALEAMFTAMCEC 132

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913320|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_A01.
         (344 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******