BP913322 [AcEST]

BP913322
Clone id	YMU001_000029_A03
Library	YMU01
Length	327
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000029_A03.
Accession	BP913322
Tissue type	prothallium
Developmental stage	-
Contig ID	CL2734Contig1
Sequence	GTGTGTATAATGCTCTATACTGACTCCTGAGCTTTATACTTGCTGCTCATTCTCTGAATT CAATGCACGCAACTGCTCCGTGTGGAGCTTGTGAGTATTAAACATAGCTGGTTATGGCTT TCGCAGGGCCTCAACTAGCGTTACGCCCAAATGGTGATGAAGATGTGGACTTCTTTGATC AGCTTGCTGACGATCTTGGCCAGAGATCAGATGGCATGTTTCAGAATTTCGAAGCAGAGG AACTAGAACGAGAACAAGAATCTGAAGAAAAAGTGAGAAGTGGGCTTGGACACGAGGCGC ACCACTTCGATCATGCTGCGAATGCTG
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP913322\|Adiantum capillus-veneris mRNA, clone: YMU001_000029_A03. (327 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	Q96V96
Definition	tr\|Q96V96\|Q96V96_ORPSP Mannanase ManA OS=Orpinomyces sp. (strain PC-2)
Align length	45
Score (bit)	33.1
E-value	7.0
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP913322\|Adiantum capillus-veneris mRNA, clone: YMU001_000029_A03. (327 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|Q96V96\|Q96V96_ORPSP Mannanase ManA OS=Orpinomyces sp. (strain... 33 7.0 >tr\|Q96V96\|Q96V96_ORPSP Mannanase ManA OS=Orpinomyces sp. (strain PC-2) GN=manA PE=2 SV=1 Length = 578 Score = 33.1 bits (74), Expect = 7.0 Identities = 19/45 (42%), Positives = 26/45 (57%) Frame = +3 Query: 42 AAHSLNSMHATAPCGACEYTLVMAFAGPQLALRPNGDEDVDFF 176 A H+LN + A A C CE T LV F+GP++ L E VD++ Sbjct: 66 ARHNLNVVRAWAFCDECEDATRLV-DFSGPEVTLNGENMEKVDYY 109