BP913325 |
Clone id |
YMU001_000029_A06 |
Library |
YMU01 |
Length |
539 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000029_A06. |
Accession |
BP913325 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2370Contig1 |
Sequence |
ACGAGCTTGTAAAACGACATAGCAACAATGGCTTCTCCTTCAGTTGCTCCAGTAACAAAA GATCCACTGGATTTGACAAGGGCTTACAATCCACAGGGGGCCAATATTTGAGCTTCTGTT CAAGCCAGAGCAAACATCTTGAAATGTCCTCGCCACCAAAAGGAAGAATTACTCTTGTAG ATGGAAGTGCGACTCCTTCCTCGACACAAATGACAGAGGTCACTTGAGCTCCAATGTTCA CCACACATCCTGAAGATGCTCCAGTACCAAAGGTTACAGCAACACTTTCCTGATGAATCA CAGCACTGCTAAATTGAAGGTCACGTAGGACAATTGTTAGTAGTTCCTTAATTTCTCTGC TATCAAGTGTATCAGGAACCACCAAGACAGCAGAGAGCTGTTGACGTTGTTTCACATGCA ATCCCAACTTCTCAGTTAATGCCCAATCCCAGATTGTGCATATATCATCACAAACCTGCT GGAAGGAATAATGTTCTGACACATTGAAACGACCACGGCATATTGGTCTCCGTAATTTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A2XQX0 |
Definition |
sp|A2XQX0|ARP9_ORYSI Actin-related protein 9 OS=Oryza sativa subsp. indica |
Align length |
158 |
Score (bit) |
195.0 |
E-value |
9.0e-50 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7NX50 |
Definition |
tr|A7NX50|A7NX50_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
158 |
Score (bit) |
215.0 |
E-value |
1.0e-54 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913325|Adiantum capillus-veneris mRNA, clone: YMU001_000029_A06. (521 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7NX50|A7NX50_VITVI Chromosome chr5 scaffold_2, whole genome ... 215 1e-54 tr|A9RS68|A9RS68_PHYPA Actin-related protein ARP9 OS=Physcomitre... 197 2e-49 tr|B8AR55|B8AR55_ORYSI Putative uncharacterized protein OS=Oryza... 195 1e-48 tr|B4FPV9|B4FPV9_MAIZE Putative uncharacterized protein OS=Zea m... 161 2e-38 tr|Q801R6|Q801R6_XENLA Actr8-prov protein OS=Xenopus laevis PE=2... 123 6e-27 tr|Q32NT8|Q32NT8_XENLA Actr8-a protein OS=Xenopus laevis GN=actr... 123 6e-27 tr|Q6GLD2|Q6GLD2_XENTR Novel protein similar to actin-related pr... 120 3e-26 tr|Q28CC7|Q28CC7_XENTR Novel protein similar to actin-related pr... 120 3e-26 tr|B5X2S3|B5X2S3_SALSA Actin-related protein 8 OS=Salmo salar GN... 120 3e-26 tr|B3KSW7|B3KSW7_HUMAN cDNA FLJ37188 fis, clone BRALZ2002174, hi... 120 3e-26 tr|B0WBI6|B0WBI6_CULQU Putative uncharacterized protein OS=Culex... 120 4e-26 tr|Q4S7Y1|Q4S7Y1_TETNG Chromosome 9 SCAF14710, whole genome shot... 115 1e-24 tr|A7RKL9|A7RKL9_NEMVE Predicted protein (Fragment) OS=Nematoste... 114 3e-24 tr|B6P3Q8|B6P3Q8_BRAFL Putative uncharacterized protein (Fragmen... 111 2e-23 tr|B6JYF0|B6JYF0_SCHJP Actin-like protein ARP8 OS=Schizosaccharo... 108 2e-22 tr|Q0V8C1|Q0V8C1_BOVIN Actin-related protein 8 (Fragment) OS=Bos... 107 4e-22 tr|B4GW11|B4GW11_DROPE GL14560 OS=Drosophila persimilis GN=GL145... 105 1e-21 tr|Q6CA98|Q6CA98_YARLI YALI0D04719p OS=Yarrowia lipolytica GN=YA... 105 1e-21 tr|Q54JV5|Q54JV5_DICDI Actin related protein 8 OS=Dictyostelium ... 104 2e-21 tr|B3NWY7|B3NWY7_DROER GG18155 OS=Drosophila erecta GN=GG18155 P... 103 4e-21 tr|B4R6Q0|B4R6Q0_DROSI GD15659 OS=Drosophila simulans GN=GD15659... 103 7e-21 tr|B4J3C4|B4J3C4_DROGR GH14798 OS=Drosophila grimshawi GN=GH1479... 103 7e-21 tr|B4I6K8|B4I6K8_DROSE GM22847 OS=Drosophila sechellia GN=GM2284... 103 7e-21 tr|B4Q2L4|B4Q2L4_DROYA GE15564 OS=Drosophila yakuba GN=GE15564 P... 102 9e-21 tr|B4NC07|B4NC07_DROWI GK25163 OS=Drosophila willistoni GN=GK251... 102 1e-20 tr|B4MAD6|B4MAD6_DROVI GJ15683 OS=Drosophila virilis GN=GJ15683 ... 102 1e-20 tr|B4L6D2|B4L6D2_DROMO GI16345 OS=Drosophila mojavensis GN=GI163... 101 2e-20 tr|A5DHN7|A5DHN7_PICGU Putative uncharacterized protein OS=Pichi... 101 2e-20 tr|Q6BIH3|Q6BIH3_DEBHA DEHA2G10406p OS=Debaryomyces hansenii GN=... 101 3e-20 tr|A3GFF1|A3GFF1_PICST Actin-related protein OS=Pichia stipitis ... 100 7e-20
>tr|A7NX50|A7NX50_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020181001 PE=3 SV=1 Length = 602
Score = 215 bits (547), Expect = 1e-54 Identities = 101/158 (63%), Positives = 125/158 (79%) Frame = -2
Query: 517 LRRPICRGRFNVSEHYSFQQVCDDICTIWDWALTEKLGLHVKQRQQLSAVLVVPDTLDSR 338 LRRPI RG FNVS+HY QQV +D+ TIWDW L EKL + +R SA+LVVP+T D+R Sbjct: 199 LRRPIRRGHFNVSQHYPMQQVLEDLFTIWDWVLIEKLHIPHCERNMYSAILVVPETFDNR 258
Query: 337 EIKELLTIVLRDLQFSSAVIHQESVAVTFGTGASSGCVVNIGAQVTSVICVEEGVALPST 158 EIKE+L+IVLRDL FSSAV+HQE +A FG G S+ CVVN+GAQVTSVIC+E+GVALPST Sbjct: 259 EIKEMLSIVLRDLCFSSAVVHQEGLAAVFGNGLSTACVVNMGAQVTSVICIEDGVALPST 318
Query: 157 RVILPFGGEDISRCLLWLEQKLKYWPPVDCKPLSNPVD 44 ++ LPFGGEDISRCLLW ++ + WPP+ L+ P+D Sbjct: 319 QMTLPFGGEDISRCLLWTQRHHQTWPPIRTDALTKPID 356
>tr|A9RS68|A9RS68_PHYPA Actin-related protein ARP9 OS=Physcomitrella patens subsp. patens GN=ARP1502 PE=4 SV=1 Length = 746
Score = 197 bits (502), Expect = 2e-49 Identities = 99/165 (60%), Positives = 123/165 (74%), Gaps = 7/165 (4%) Frame = -2
Query: 517 LRRPICRGRFNVSEHYSFQQVCDDICTIWDWALTEKLGLHVKQRQQLSAVLVVPDTLDSR 338 L RP+CRGR N+S YS QQVCDDI IWD+ LTEK + K R + SAVLVVPDTLD+R Sbjct: 328 LYRPMCRGRLNISSKYSMQQVCDDIYRIWDYVLTEKCHIGSKMRPRFSAVLVVPDTLDNR 387
Query: 337 -----EIKELLTIVLRDLQFSSAVIHQESVAVTFGTGASSGCVVNIGAQVTSVICVEEGV 173 E+KELL++VLRDLQF SAV+ QE VA TFG G SSGC+VN+GAQV + +CVEEGV Sbjct: 388 AYLTAEVKELLSVVLRDLQFHSAVVIQECVATTFGNGFSSGCIVNMGAQVITGMCVEEGV 447
Query: 172 ALPSTRVILPFGGE--DISRCLLWLEQKLKYWPPVDCKPLSNPVD 44 A+PSTR +LP+GG+ DI+RCL W++Q+ K WP L + +D Sbjct: 448 AIPSTRFVLPYGGDVRDITRCLFWVQQRKKTWPITGTDLLRDSLD 492
>tr|B8AR55|B8AR55_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_15039 PE=4 SV=1 Length = 589
Score = 195 bits (496), Expect = 1e-48 Identities = 90/158 (56%), Positives = 121/158 (76%) Frame = -2
Query: 517 LRRPICRGRFNVSEHYSFQQVCDDICTIWDWALTEKLGLHVKQRQQLSAVLVVPDTLDSR 338 L PI RG FN+S+ YS QV +D+ TIW+W LTEKL ++ + R SA+LV+ +T D+R Sbjct: 194 LSHPIRRGHFNISQDYSLHQVLEDLRTIWNWILTEKLHINPRDRHLYSAILVLGETFDNR 253
Query: 337 EIKELLTIVLRDLQFSSAVIHQESVAVTFGTGASSGCVVNIGAQVTSVICVEEGVALPST 158 EIKE+L+IVL DL FS+AVIHQE++A FG G S+ CVVNIGAQVT V+CVE+GVALP T Sbjct: 254 EIKEMLSIVLCDLGFSTAVIHQEALAAAFGNGLSTSCVVNIGAQVTQVVCVEDGVALPHT 313
Query: 157 RVILPFGGEDISRCLLWLEQKLKYWPPVDCKPLSNPVD 44 + LP+GG+DISRCLLW++++ + WP P++ P+D Sbjct: 314 ALALPYGGDDISRCLLWVQRRHRTWPNFQTDPVNRPID 351
>tr|B4FPV9|B4FPV9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 546
Score = 161 bits (408), Expect = 2e-38 Identities = 77/129 (59%), Positives = 101/129 (78%) Frame = -2
Query: 517 LRRPICRGRFNVSEHYSFQQVCDDICTIWDWALTEKLGLHVKQRQQLSAVLVVPDTLDSR 338 L RPI RG FNVS +YS QV +D+ TIW+W LTEKL ++ + R SA+LV+ +T D+R Sbjct: 195 LSRPIRRGHFNVSHNYSVHQVLEDLRTIWNWILTEKLHINPRDRGLYSAILVLGETFDNR 254
Query: 337 EIKELLTIVLRDLQFSSAVIHQESVAVTFGTGASSGCVVNIGAQVTSVICVEEGVALPST 158 EIKE+L+IVL DL FS+AV+HQE+++ FG G S+ CVVNIGAQVT V+CVE+GVALP T Sbjct: 255 EIKEMLSIVLHDLGFSTAVVHQEALSAAFGNGLSTTCVVNIGAQVTQVVCVEDGVALPHT 314
Query: 157 RVILPFGGE 131 + LP+GG+ Sbjct: 315 ALALPYGGD 323
>tr|Q801R6|Q801R6_XENLA Actr8-prov protein OS=Xenopus laevis PE=2 SV=1 Length = 617
Score = 123 bits (308), Expect = 6e-27 Identities = 64/160 (40%), Positives = 99/160 (61%), Gaps = 2/160 (1%) Frame = -2
Query: 517 LRRPICRGRFNVSEHY--SFQQVCDDICTIWDWALTEKLGLHVKQRQQLSAVLVVPDTLD 344 L PI RG+ N+ S V D+ TIW L + L + +K + +L++PD + Sbjct: 178 LHSPIQRGQLNIHSGPGGSLTAVLTDLETIWSHVLQKMLEIQLKDLKYYRCILLIPDIYN 237
Query: 343 SREIKELLTIVLRDLQFSSAVIHQESVAVTFGTGASSGCVVNIGAQVTSVICVEEGVALP 164 + +KE++ ++L + FS ++HQESV +G+G SS CVV+IG Q TSV CVE+G++ Sbjct: 238 RQHVKEMVNMLLMKMGFSGVIVHQESVCAAYGSGLSSACVVDIGDQKTSVCCVEDGISHR 297
Query: 163 STRVILPFGGEDISRCLLWLEQKLKYWPPVDCKPLSNPVD 44 +TR+ L +GG DI+RCL WL Q+ + P +C+ LSN +D Sbjct: 298 NTRLCLAYGGSDITRCLFWLMQRAGF-PYRECQ-LSNNLD 335
>tr|Q32NT8|Q32NT8_XENLA Actr8-a protein OS=Xenopus laevis GN=actr8-a PE=2 SV=1 Length = 617
Score = 123 bits (308), Expect = 6e-27 Identities = 64/160 (40%), Positives = 99/160 (61%), Gaps = 2/160 (1%) Frame = -2
Query: 517 LRRPICRGRFNVSEHY--SFQQVCDDICTIWDWALTEKLGLHVKQRQQLSAVLVVPDTLD 344 L PI RG+ N+ S V D+ TIW L + L + +K + +L++PD + Sbjct: 178 LHSPIQRGQLNIHSGPGGSLTAVLTDLETIWSHVLQKMLEIQLKDLKYYRCILLIPDIYN 237
Query: 343 SREIKELLTIVLRDLQFSSAVIHQESVAVTFGTGASSGCVVNIGAQVTSVICVEEGVALP 164 + +KE++ ++L + FS ++HQESV +G+G SS CVV+IG Q TSV CVE+G++ Sbjct: 238 RQHVKEMVNMLLMKMGFSGVIVHQESVCAAYGSGLSSACVVDIGDQKTSVCCVEDGISHR 297
Query: 163 STRVILPFGGEDISRCLLWLEQKLKYWPPVDCKPLSNPVD 44 +TR+ L +GG DI+RCL WL Q+ + P +C+ LSN +D Sbjct: 298 NTRLCLAYGGSDITRCLFWLMQRAGF-PYRECQ-LSNNLD 335
>tr|Q6GLD2|Q6GLD2_XENTR Novel protein similar to actin-related protein 8 OS=Xenopus tropicalis GN=actr8 PE=2 SV=1 Length = 659
Score = 120 bits (302), Expect = 3e-26 Identities = 63/160 (39%), Positives = 99/160 (61%), Gaps = 2/160 (1%) Frame = -2
Query: 517 LRRPICRGRFNVSEHY--SFQQVCDDICTIWDWALTEKLGLHVKQRQQLSAVLVVPDTLD 344 L PI RG+ N+ S V D+ TIW L + L + +K + +L++PD + Sbjct: 178 LHYPIRRGQLNLHSGPGGSLTAVLADLETIWSHVLQKMLEIQLKDLKYYRCILLIPDIYN 237
Query: 343 SREIKELLTIVLRDLQFSSAVIHQESVAVTFGTGASSGCVVNIGAQVTSVICVEEGVALP 164 + +KE++ ++L + FS ++HQESV +G+G SS CVV++G Q TSV CVE+G++ Sbjct: 238 RQHVKEMVNMLLMKMGFSGIIVHQESVCAMYGSGLSSACVVDVGDQKTSVCCVEDGISHR 297
Query: 163 STRVILPFGGEDISRCLLWLEQKLKYWPPVDCKPLSNPVD 44 +TR+ L +GG D++RCL WL Q+ + P DC+ LSN +D Sbjct: 298 NTRLCLAYGGSDVTRCLYWLMQRAGF-PYRDCQ-LSNYLD 335
>tr|Q28CC7|Q28CC7_XENTR Novel protein similar to actin-related protein 8 OS=Xenopus tropicalis GN=TGas127d02.1-001 PE=2 SV=1 Length = 617
Score = 120 bits (302), Expect = 3e-26 Identities = 63/160 (39%), Positives = 99/160 (61%), Gaps = 2/160 (1%) Frame = -2
Query: 517 LRRPICRGRFNVSEHY--SFQQVCDDICTIWDWALTEKLGLHVKQRQQLSAVLVVPDTLD 344 L PI RG+ N+ S V D+ TIW L + L + +K + +L++PD + Sbjct: 178 LHYPIRRGQLNLHSGPGGSLTAVLADLETIWSHVLQKMLEIQLKDLKYYRCILLIPDIYN 237
Query: 343 SREIKELLTIVLRDLQFSSAVIHQESVAVTFGTGASSGCVVNIGAQVTSVICVEEGVALP 164 + +KE++ ++L + FS ++HQESV +G+G SS CVV++G Q TSV CVE+G++ Sbjct: 238 RQHVKEMVNMLLMKMGFSGIIVHQESVCAMYGSGLSSACVVDVGDQKTSVCCVEDGISHR 297
Query: 163 STRVILPFGGEDISRCLLWLEQKLKYWPPVDCKPLSNPVD 44 +TR+ L +GG D++RCL WL Q+ + P DC+ LSN +D Sbjct: 298 NTRLCLAYGGSDVTRCLYWLMQRAGF-PYRDCQ-LSNYLD 335
>tr|B5X2S3|B5X2S3_SALSA Actin-related protein 8 OS=Salmo salar GN=ARP8 PE=2 SV=1 Length = 632
Score = 120 bits (302), Expect = 3e-26 Identities = 65/157 (41%), Positives = 99/157 (63%), Gaps = 2/157 (1%) Frame = -2
Query: 508 PICRGRFNVSEHY--SFQQVCDDICTIWDWALTEKLGLHVKQRQQLSAVLVVPDTLDSRE 335 PI RG+ NV S V D+ IW + ++L + +K + +L+VPD + Sbjct: 190 PISRGQLNVHGGVGGSLTAVLADLEAIWSHVIQKQLEIPLKDLKYYRCILLVPDIYNRHH 249
Query: 334 IKELLTIVLRDLQFSSAVIHQESVAVTFGTGASSGCVVNIGAQVTSVICVEEGVALPSTR 155 IKEL+ ++L ++ FS+ V+HQESV TFG+G SS CVV++G Q TS+ CVE+GV+ ++R Sbjct: 250 IKELVNMLLLNMGFSAIVVHQESVCATFGSGLSSACVVDVGDQKTSLCCVEDGVSHRNSR 309
Query: 154 VILPFGGEDISRCLLWLEQKLKYWPPVDCKPLSNPVD 44 + L +GG D++RC WL Q+ + P +C+ LSN VD Sbjct: 310 LCLAYGGADVTRCFFWLLQRAGF-PYRECQ-LSNRVD 344
>tr|B3KSW7|B3KSW7_HUMAN cDNA FLJ37188 fis, clone BRALZ2002174, highly similar to Actin-related protein 8 OS=Homo sapiens PE=2 SV=1 Length = 513
Score = 120 bits (302), Expect = 3e-26 Identities = 63/157 (40%), Positives = 98/157 (62%), Gaps = 2/157 (1%) Frame = -2
Query: 508 PICRGRFNV--SEHYSFQQVCDDICTIWDWALTEKLGLHVKQRQQLSAVLVVPDTLDSRE 335 PI RG+ N+ S V DI IW A+ + L + +K + +L++PD + + Sbjct: 74 PIRRGQLNIHPGPGGSLTAVLADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQH 133
Query: 334 IKELLTIVLRDLQFSSAVIHQESVAVTFGTGASSGCVVNIGAQVTSVICVEEGVALPSTR 155 +KEL+ ++L + FS V+HQESV T+G+G SS C+V++G Q TSV CVE+GV+ +TR Sbjct: 134 VKELVNMILMKMGFSGIVVHQESVCATYGSGLSSTCIVDVGDQKTSVCCVEDGVSHRNTR 193
Query: 154 VILPFGGEDISRCLLWLEQKLKYWPPVDCKPLSNPVD 44 + L +GG D+SRC WL Q+ + P +C+ L+N +D Sbjct: 194 LCLAYGGSDVSRCFYWLMQRAGF-PYRECQ-LTNKMD 228
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