BP913330
Clone id YMU001_000029_A11
Library
Length 548
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000029_A11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTTTTTTTTTTTTTTGCCAAACAACTTGAGCTAACTTGCAAGTTCAAAAGCTGATAAAG
AAAACGCATAGGAAACACTAATTTATCAACCCCCCTCGATCCCATAGGCATGGCATTTAG
GGAGCCCACATTTTCACTAGAAAGCAAAGCCCATCACTCTGCTTGTATTGCAAAGAGTTG
TATCCACCTTGCTAGTTGACAAATGTAGCTATTTTAACTTCTCTGTATAAGCCCAAACTT
ACTGTGCTCAAAAGCCACTCTAGCAAGGATTCCTTTAATTTTCTCTGATAGAGGCACTTT
CCTAACACAAGATCCTTATCCTTACAATGCAGCAAAAAGAATCGACTGCATTCATACGAC
AGACCACCGTGGCTACTGTCCACTCGCTGTGCCTTGTTCCACACACATCGCTTCTCATTA
AGCTTTTGCAATGTCTTGTATTTATCCCAATGGGCCAAGCCTGTTTTCCTCTTTTTTCTT
TCTGCCAAAACTTGTAACACCTCCATTGCAAATTACCTTGATCCTTCTGTTGAACACTGC
CTTCTCTA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913330|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_A11.
(532 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q8P3X9
Definition tr|Q8P3X9|Q8P3X9_XANCP Putative uncharacterized protein XCC3939 OS=Xanthomonas campestris pv. campestris
Align length 40
Score (bit) 36.2
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913330|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_A11.
(532 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8P3X9|Q8P3X9_XANCP Putative uncharacterized protein XCC3939 ... 36 1.1
tr|Q4UPF7|Q4UPF7_XANC8 Putative uncharacterized protein OS=Xanth... 36 1.1
tr|B0RXV9|B0RXV9_XANCB Putative uncharacterized protein OS=Xanth... 36 1.1

>tr|Q8P3X9|Q8P3X9_XANCP Putative uncharacterized protein XCC3939
OS=Xanthomonas campestris pv. campestris GN=XCC3939 PE=4
SV=1
Length = 251

Score = 36.2 bits (82), Expect = 1.1
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2

Query: 326 STAFIRQTTVATVHSLCLVPHTSLLIKLLQCLVFIPMGQA 445
+T F++Q T++ VH L L PH ++L+ CL + +G A
Sbjct: 42 TTQFLQQKTISPVHGLTLTPHDAVLLAATCCLPLLNIGAA 81


>tr|Q4UPF7|Q4UPF7_XANC8 Putative uncharacterized protein
OS=Xanthomonas campestris pv. campestris (strain 8004)
GN=XC_4027 PE=4 SV=1
Length = 251

Score = 36.2 bits (82), Expect = 1.1
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2

Query: 326 STAFIRQTTVATVHSLCLVPHTSLLIKLLQCLVFIPMGQA 445
+T F++Q T++ VH L L PH ++L+ CL + +G A
Sbjct: 42 TTQFLQQKTISPVHGLTLTPHDAVLLAATCCLPLLNIGAA 81


>tr|B0RXV9|B0RXV9_XANCB Putative uncharacterized protein
OS=Xanthomonas campestris pv. campestris (strain B100)
GN=xcc-b100_4126 PE=4 SV=1
Length = 251

Score = 36.2 bits (82), Expect = 1.1
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2

Query: 326 STAFIRQTTVATVHSLCLVPHTSLLIKLLQCLVFIPMGQA 445
+T F++Q T++ VH L L PH ++L+ CL + +G A
Sbjct: 42 TTQFLQQKTISPVHGLTLTPHDAVLLAATCCLPLLNIGAA 81