BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913332|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_B01.
         (453 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q32RK5|YCF1_ZYGCR Putative membrane protein ycf1 OS=Zygnema c...    29   8.4  
sp|A8LRR7|UREF_DINSH Urease accessory protein ureF OS=Dinoroseob...    29   8.4  

>sp|Q32RK5|YCF1_ZYGCR Putative membrane protein ycf1 OS=Zygnema
            circumcarinatum GN=ycf1 PE=3 SV=1
          Length = 1676

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 16/67 (23%), Positives = 33/67 (49%)
 Frame = -1

Query: 414  DHICSSYHLYICSSLVHGLLKEVFQAMKLSNVSLTKGQVLNRQLHPALSTSP*MVESWPF 235
            DH+  SY+++         L+ V++   + + S+T+  +LN+     + ++P +  SW  
Sbjct: 1083 DHLFDSYYIWRMKHFTAKHLQNVYETTPIDSSSITQAYILNKIWQSIIESTPNL--SW-- 1138

Query: 234  ASIGQWT 214
                QWT
Sbjct: 1139 -VTQQWT 1144


>sp|A8LRR7|UREF_DINSH Urease accessory protein ureF
           OS=Dinoroseobacter shibae (strain DFL 12) GN=ureF PE=3
           SV=1
          Length = 210

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = -1

Query: 339 AMKLSNVSLTKGQVLNRQLHPALSTSP*MVESWPFASIG 223
           A++L  +  T+GQ +++ LHP +ST    + + P + IG
Sbjct: 149 AVRLIPLGQTEGQQVSQSLHPTISTQARCLATRPLSEIG 187

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913332|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_B01.
         (453 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A0BYI1|A0BYI1_PARTE Chromosome undetermined scaffold_137, who...    33   7.1  

>tr|A0BYI1|A0BYI1_PARTE Chromosome undetermined scaffold_137, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00033451001 PE=4 SV=1
          Length = 432

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = -1

Query: 435 CSYCKTTDHICSSY-HLYICSSLVHGLLKEVFQAMKLSNVS-LTKGQVLNRQLHPALSTS 262
           C YCK   H+   Y H   C+S  H       +++ LSN S L K +V N++++   S+S
Sbjct: 11  CKYCKERIHVIQMYAHTLECNSSNHPNFNSQIKSVVLSNQSQLQKQKVTNQEINDQQSSS 70