| BP913335 |
| Clone id |
YMU001_000029_B04 |
| Library |
YMU01 |
| Length |
552 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000029_B04. |
| Accession |
BP913335 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
CGCTCGGGCGGGCGCCCGAACGAGCGCGATCTCGAGGTCTGAGGCGTAGCACTTCACAAG
CCAGCTAAATAATTCAGGAATTCAAAATTCCCGTGATCACGAGGATGGTACTGGTATGTT
CAGAGAACCCATTCTACCTGCCCGGGTCATCTGCAGGGTGCTCATCTCAAAGAAAACCCA
GACTGATGGCAGCTGCCGTAGAGATCCTTTTTGTGAGCAGAGACGTATGTATGAAGCTTT
GCGAAAACAGGTGCAGAAGCAGGAAGAAACCTCCTTGGATGTACTTGATCAACCCGGGAT
AACCCTCAATTTGACTTCCTTTTCCTCTCTTCTGCGCACCTGCACACGCCACAAAACTCT
AGCAGATGGCAAGCGTGTCCATCACCTCATTCACCAAGCAGGACTACAGACAAACCCCTT
TCTGTCAAGTCTCCTTATTCGTATGTATGCACAATGTGGTGCCCTTGATCCTGCATGCTC
TGTATTTTCGGAGACCCTGGCTCGTGACACATATACGTGGAACATCATGATTGGGTCTTT
CCTTTGCCATGG |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q9C9I3 |
| Definition |
sp|Q9C9I3|PP115_ARATH Pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Arabidopsis thaliana |
| Align length |
111 |
| Score (bit) |
84.0 |
| E-value |
5.0e-16 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913335|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_B04.
(552 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9C9I3|PP115_ARATH Pentatricopeptide repeat-containing protei... 84 5e-16
sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protei... 70 5e-12
sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protei... 68 3e-11
sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protei... 66 1e-10
sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protei... 64 4e-10
sp|Q9SB36|PP337_ARATH Pentatricopeptide repeat-containing protei... 62 2e-09
sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protei... 61 3e-09
sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protei... 61 4e-09
sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protei... 60 5e-09
sp|Q9LVF9|PP245_ARATH Pentatricopeptide repeat-containing protei... 60 9e-09
sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protei... 59 2e-08
sp|Q9FI49|PP428_ARATH Pentatricopeptide repeat-containing protei... 59 2e-08
sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protei... 59 2e-08
sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protei... 59 2e-08
sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protei... 59 2e-08
sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protei... 59 2e-08
sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protei... 59 2e-08
sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protei... 59 2e-08
sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protei... 58 3e-08
sp|O82363|PP203_ARATH Pentatricopeptide repeat-containing protei... 58 3e-08
sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protei... 57 5e-08
sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containi... 57 6e-08
sp|Q9MAT2|PPR10_ARATH Pentatricopeptide repeat-containing protei... 57 8e-08
sp|O65543|PP343_ARATH Pentatricopeptide repeat-containing protei... 57 8e-08
sp|Q9SN85|PP267_ARATH Pentatricopeptide repeat-containing protei... 57 8e-08
sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containi... 57 8e-08
sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protei... 56 1e-07
sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protei... 56 1e-07
sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protei... 56 1e-07
sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protei... 56 1e-07
>sp|Q9C9I3|PP115_ARATH Pentatricopeptide repeat-containing protein
At1g71460, chloroplastic OS=Arabidopsis thaliana
GN=PCMP-A3 PE=2 SV=1
Length = 689
Score = 84.0 bits (206), Expect = 5e-16
Identities = 42/111 (37%), Positives = 66/111 (59%)
Frame = +2
Query: 200 RDPFCEQRRMYEALRKQVQKQEETSLDVLDQPGITLNLTSFSSLLRTCTRHKTLADGKRV 379
++P+ R + R+ + T LD L+Q GI +N T+FS+LL C R K+L GK+V
Sbjct: 74 KNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQV 133
Query: 380 HHLIHQAGLQTNPFLSSLLIRMYAQCGALDPACSVFSETLARDTYTWNIMI 532
H I GL++N FL + L+ MY CG++ A VF E+ + + Y+WN ++
Sbjct: 134 HVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALL 184
Score = 46.6 bits (109), Expect = 8e-05
Identities = 23/74 (31%), Positives = 40/74 (54%)
Frame = +2
Query: 329 LLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPACSVFSETLARD 508
+L C+ K L GK +H I + ++ PF+S+ +I+MY +CG L A F +
Sbjct: 525 VLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKG 584
Query: 509 TYTWNIMIGSFLCH 550
+ TW +I ++ C+
Sbjct: 585 SLTWTAIIEAYGCN 598
Score = 37.7 bits (86), Expect = 0.037
Identities = 25/107 (23%), Positives = 46/107 (42%)
Frame = +2
Query: 224 RMYEALRKQVQKQEETSLDVLDQPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAG 403
R +ALR V Q+E G ++ + +++L C + + GK +H +
Sbjct: 398 RFDQALRSIVWMQQE---------GFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNL 448
Query: 404 LQTNPFLSSLLIRMYAQCGALDPACSVFSETLARDTYTWNIMIGSFL 544
N L + L+ MY++CG + +F R+ W MI ++
Sbjct: 449 FLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYV 495
Score = 37.0 bits (84), Expect = 0.064
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +2
Query: 281 VLDQPGITLNLTSFSSLLRTCTRHKTLADGKRVH-HLIHQAGLQTNPFLSSLLIRMYAQC 457
++ + I N +++L K L GK VH H++ PF+ S LI +Y +C
Sbjct: 306 MISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKC 365
Query: 458 GALDPACSVFSETLARDTYTWNIMIGSF 541
G + VF + R+ +W ++ +
Sbjct: 366 GDMASGRRVFYGSKQRNAISWTALMSGY 393
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein
At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=2 SV=1
Length = 781
Score = 70.5 bits (171), Expect = 5e-12
Identities = 44/142 (30%), Positives = 67/142 (47%), Gaps = 9/142 (6%)
Frame = +2
Query: 152 CRVLISKKTQTDGSCRRDP---------FCEQRRMYEALRKQVQKQEETSLDVLDQPGIT 304
C + K D +RDP + + +EALR VQ + E G
Sbjct: 356 CGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMERE---------GGR 406
Query: 305 LNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPACSV 484
LN +SFSS L TC L GK++H + + G +T F+ + L+ MY +CG+++ A +
Sbjct: 407 LNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDL 466
Query: 485 FSETLARDTYTWNIMIGSFLCH 550
F E +D +WN MI + H
Sbjct: 467 FKEMAGKDIVSWNTMIAGYSRH 488
Score = 34.7 bits (78), Expect = 0.32
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 434 LIRMYAQCGALDPACSVFSETLARDTYTWNIMIGSFL 544
+I YAQ G +D A +F E+ +D +TW M+ ++
Sbjct: 256 IITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYI 292
Score = 32.0 bits (71), Expect = 2.0
Identities = 18/80 (22%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 308 NLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQT-NPFLSSLLIRMYAQCGALDPACSV 484
+L S++ +++ R++ L + + ++ + + + N LS YAQ G +D A SV
Sbjct: 125 DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSG-----YAQNGCVDDARSV 179
Query: 485 FSETLARDTYTWNIMIGSFL 544
F ++ +WN ++ +++
Sbjct: 180 FDRMPEKNDVSWNALLSAYV 199
Score = 31.2 bits (69), Expect = 3.5
Identities = 25/108 (23%), Positives = 45/108 (41%)
Frame = +2
Query: 218 QRRMYEALRKQVQKQEETSLDVLDQPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQ 397
Q RM E R+ K E N S++++L + + + K + ++
Sbjct: 293 QNRMVEEARELFDKMPER------------NEVSWNAMLAGYVQGERMEMAKELFDVMPC 340
Query: 398 AGLQTNPFLSSLLIRMYAQCGALDPACSVFSETLARDTYTWNIMIGSF 541
+ T + +I YAQCG + A ++F + RD +W MI +
Sbjct: 341 RNVST----WNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGY 384
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic OS=Arabidopsis thaliana
GN=PCMP-H45 PE=2 SV=1
Length = 871
Score = 68.2 bits (165), Expect = 3e-11
Identities = 31/86 (36%), Positives = 56/86 (65%)
Frame = +2
Query: 284 LDQPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGA 463
+++ GI+ ++ + +++L C R++ L +GKRVH I + L + F+S+ L+ MYA+CG+
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 447
Query: 464 LDPACSVFSETLARDTYTWNIMIGSF 541
+ A VFSE +D +WN +IG +
Sbjct: 448 MQEAELVFSEMRVKDIISWNTIIGGY 473
Score = 47.8 bits (112), Expect = 4e-05
Identities = 26/69 (37%), Positives = 33/69 (47%)
Frame = +2
Query: 326 SLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPACSVFSETLAR 505
S+L+ C K+L DGK V + I G + L S L MY CG L A VF E
Sbjct: 99 SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIE 158
Query: 506 DTYTWNIMI 532
WNI++
Sbjct: 159 KALFWNILM 167
Score = 45.8 bits (107), Expect = 1e-04
Identities = 22/90 (24%), Positives = 47/90 (52%)
Frame = +2
Query: 281 VLDQPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCG 460
+L++ + + + + +L C G+ +H I + G ++ +++ L+ MYA+CG
Sbjct: 489 LLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCG 548
Query: 461 ALDPACSVFSETLARDTYTWNIMIGSFLCH 550
AL A +F + ++D +W +MI + H
Sbjct: 549 ALLLAHMLFDDIASKDLVSWTVMIAGYGMH 578
Score = 43.1 bits (100), Expect = 9e-04
Identities = 23/82 (28%), Positives = 41/82 (50%)
Frame = +2
Query: 296 GITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPA 475
GI ++L + S+ C + ++ G+ VH + +A + L+ MY++CG LD A
Sbjct: 291 GIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSA 350
Query: 476 CSVFSETLARDTYTWNIMIGSF 541
+VF E R ++ MI +
Sbjct: 351 KAVFREMSDRSVVSYTSMIAGY 372
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein
At3g09040, mitochondrial OS=Arabidopsis thaliana
GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 65.9 bits (159), Expect = 1e-10
Identities = 32/83 (38%), Positives = 48/83 (57%)
Frame = +2
Query: 296 GITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPA 475
G ++ +F+SLL TC L G + H +I + L N F+ + L+ MYA+CGAL+ A
Sbjct: 423 GYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDA 482
Query: 476 CSVFSETLARDTYTWNIMIGSFL 544
+F RD TWN +IGS++
Sbjct: 483 RQIFERMCDRDNVTWNTIIGSYV 505
Score = 49.3 bits (116), Expect = 1e-05
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 296 GITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPA 475
G+ + +F ++LR C+ +L +G+ +H LI + S+ LI MYA+CG + +
Sbjct: 727 GVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGS 786
Query: 476 CSVFSETLAR-DTYTWNIMIGSF 541
VF E R + +WN +I +
Sbjct: 787 SQVFDEMRRRSNVVSWNSLINGY 809
Score = 48.1 bits (113), Expect = 3e-05
Identities = 22/79 (27%), Positives = 40/79 (50%)
Frame = +2
Query: 308 NLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPACSVF 487
N +FS +L TC R + G+++H + + GL+ N + L+ MYA+C + A VF
Sbjct: 159 NKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVF 218
Query: 488 SETLARDTYTWNIMIGSFL 544
+ +T W + ++
Sbjct: 219 EWIVDPNTVCWTCLFSGYV 237
Score = 45.4 bits (106), Expect = 2e-04
Identities = 27/82 (32%), Positives = 39/82 (47%)
Frame = +2
Query: 296 GITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPA 475
GI + +S L+ CT L GK+VH L + GL + S LI MY++CG + A
Sbjct: 524 GIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDA 583
Query: 476 CSVFSETLARDTYTWNIMIGSF 541
VFS + N +I +
Sbjct: 584 RKVFSSLPEWSVVSMNALIAGY 605
Score = 37.4 bits (85), Expect = 0.049
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 368 GKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPACSVFSETLARDTYTWNIMIGSF 541
G VH + GL +N ++ S L+ MY++C ++ A VF ++ WN MI +
Sbjct: 346 GLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGY 403
Score = 33.1 bits (74), Expect = 0.92
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 296 GITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTN-PFLSSLLIRMYAQCGALDP 472
G+ + +F++++ C + ++L G + H I + G + +L L+ MY +
Sbjct: 624 GVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTE 683
Query: 473 ACSVFSE 493
AC++FSE
Sbjct: 684 ACALFSE 690
>sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protein
At2g21090 OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1
Length = 597
Score = 64.3 bits (155), Expect = 4e-10
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Frame = +2
Query: 197 RRDPFC-EQRRMYEALRKQVQKQEETSLDVLDQPGITLNLTSFSSLLRTCTRHKTLADGK 373
R+ P C Q + + K Q + L+ L Q GI L +SLL+ C K+L GK
Sbjct: 7 RKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGK 66
Query: 374 RVHHLIHQAGLQT-NPFLSSLLIRMYAQCGALDPACSVFSETLARDTYTWNIMIGSFL 544
+H + G + N LS+ LI MY +CG AC VF + R+ Y+WN M+ ++
Sbjct: 67 WIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYV 124
Score = 53.5 bits (127), Expect = 7e-07
Identities = 26/82 (31%), Positives = 41/82 (50%)
Frame = +2
Query: 296 GITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPA 475
GI N SF+ LL C + + L ++ H + AG +N LS +I YA+CG ++ A
Sbjct: 174 GIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESA 233
Query: 476 CSVFSETLARDTYTWNIMIGSF 541
F E +D + W +I +
Sbjct: 234 KRCFDEMTVKDIHIWTTLISGY 255
>sp|Q9SB36|PP337_ARATH Pentatricopeptide repeat-containing protein
At4g25270, chloroplastic OS=Arabidopsis thaliana
GN=PCMP-E53 PE=2 SV=1
Length = 527
Score = 62.0 bits (149), Expect = 2e-09
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Frame = +2
Query: 269 TSLDVLDQPGITLNLTS-FSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRM 445
T L+ Q GI+L F+SLL TC + + G RVHHLI L+ N +SS L+R+
Sbjct: 77 TDLETSAQKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRL 136
Query: 446 YAQCGALDPACSVFSETLARDT--YTWNIMIGSF 541
YA CG + A VF RD+ + WN +I +
Sbjct: 137 YASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGY 170
Score = 46.2 bits (108), Expect = 1e-04
Identities = 25/83 (30%), Positives = 47/83 (56%)
Frame = +2
Query: 290 QPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALD 469
Q GI + + SS+L R + G+++H + + G++ +++ LI +Y++ G L
Sbjct: 289 QNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLG 345
Query: 470 PACSVFSETLARDTYTWNIMIGS 538
AC +F + L RDT +WN +I +
Sbjct: 346 QACFIFDQMLERDTVSWNAIISA 368
Score = 43.9 bits (102), Expect = 5e-04
Identities = 22/87 (25%), Positives = 46/87 (52%)
Frame = +2
Query: 290 QPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALD 469
+ G+ + +F +L+ C ++ G+ +H + + G + ++ + L+ MYA+CG +
Sbjct: 188 EDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIV 247
Query: 470 PACSVFSETLARDTYTWNIMIGSFLCH 550
A +VF +D +WN M+ +L H
Sbjct: 248 KARNVFDMIPHKDYVSWNSMLTGYLHH 274
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein
At3g63370 OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 61.2 bits (147), Expect = 3e-09
Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Frame = +2
Query: 155 RVLISKKTQTDGSCRRDPFCEQRRMYEALRKQVQKQEETSLDVLDQPGITLN---LTSFS 325
RV + T+ SCRR+PF + + + ++ + + + ++ N + +F+
Sbjct: 25 RVRLHCSIPTEPSCRRNPFRQSNQPVQVPSPKLACFDGVLTEAFQRLDVSENNSPVEAFA 84
Query: 326 SLLRTCTRHKTLADGKRVHHLIHQAGLQTN-PFLSSLLIRMYAQCGALDPACSVFSETLA 502
+L C + + ++ G+++H I + FL+ L+ MY +CG+LD A VF E
Sbjct: 85 YVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPD 144
Query: 503 RDTYTWNIMIGSFL 544
R + WN MIG+++
Sbjct: 145 RTAFAWNTMIGAYV 158
Score = 34.7 bits (78), Expect = 0.32
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +2
Query: 308 NLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNP-FLSSLLIRMYAQCGALDPACSV 484
N + S L C GK +H + ++ ++ ++ + LI MY +CG + A +
Sbjct: 283 NSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERI 342
Query: 485 FSETLARDTYTWNIMIGSFL 544
+ D TWN +I ++
Sbjct: 343 LRQMNNADVVTWNSLIKGYV 362
Score = 32.3 bits (72), Expect = 1.6
Identities = 18/87 (20%), Positives = 37/87 (42%)
Frame = +2
Query: 290 QPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALD 469
+ G++ + + +L L G+ +H + + G ++ ++ MYA CG L
Sbjct: 580 ETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQ 639
Query: 470 PACSVFSETLARDTYTWNIMIGSFLCH 550
A +VF + + MI ++ H
Sbjct: 640 SAKAVFDRIERKGLLQYTSMINAYGMH 666
Score = 31.2 bits (69), Expect = 3.5
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +2
Query: 317 SFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPACSVFSET 496
S +S++ R L G +H + + G +N + + LI MY++C F
Sbjct: 388 SMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRM 447
Query: 497 LARDTYTWNIMIGSFL---CH 550
+D +W +I + CH
Sbjct: 448 HDKDLISWTTVIAGYAQNDCH 468
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein
At3g29230 OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 60.8 bits (146), Expect = 4e-09
Identities = 29/102 (28%), Positives = 55/102 (53%)
Frame = +2
Query: 245 KQVQKQEETSLDVLDQPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFL 424
K + K+ + +D + G+ + + S+L CT L+ G R+H ++ ++ L +N ++
Sbjct: 293 KGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYV 352
Query: 425 SSLLIRMYAQCGALDPACSVFSETLARDTYTWNIMIGSFLCH 550
+ L+ MYA+CG L A VF++ +D +WN M+ H
Sbjct: 353 LNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVH 394
Score = 47.8 bits (112), Expect = 4e-05
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Frame = +2
Query: 296 GITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALD-- 469
G+ + ++ LL+ C+ L K +H+ I + GL ++ ++ + LI Y++CG L
Sbjct: 112 GLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVR 171
Query: 470 PACSVFSETLARDTYTWNIMIGSFL 544
A +F + RDT +WN M+G +
Sbjct: 172 DAMKLFEKMSERDTVSWNSMLGGLV 196
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein
At4g37170 OS=Arabidopsis thaliana GN=PCMP-H5 PE=2 SV=1
Length = 691
Score = 60.5 bits (145), Expect = 5e-09
Identities = 26/76 (34%), Positives = 47/76 (61%)
Frame = +2
Query: 314 TSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPACSVFSE 493
+++ +L++ C++ + L +GK+VH I +G + + L+RMYA+CG+L A VF E
Sbjct: 86 STYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDE 145
Query: 494 TLARDTYTWNIMIGSF 541
RD +WN+M+ +
Sbjct: 146 MPNRDLCSWNVMVNGY 161
Score = 51.2 bits (121), Expect = 3e-06
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Frame = +2
Query: 245 KQVQKQEETSLDVLDQ--PGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNP 418
K+ Q +E L L Q P N+ + S + K + GK +H I +AGL ++
Sbjct: 194 KKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDE 253
Query: 419 FLSSLLIRMYAQCGALDPACSVFSETLARDTYTWNIMIGSF 541
L S L+ MY +CG +D A ++F + + +D +W MI +
Sbjct: 254 VLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRY 294
Score = 43.9 bits (102), Expect = 5e-04
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +2
Query: 308 NLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPACSVF 487
N +F+ +L C T GK+VH + + G F SS L+ MY +CG ++ A V
Sbjct: 318 NEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVV 377
Query: 488 SETLARDTYTWNIMIG 535
D +W +IG
Sbjct: 378 DGCPKPDLVSWTSLIG 393
>sp|Q9LVF9|PP245_ARATH Pentatricopeptide repeat-containing protein
At3g21470 OS=Arabidopsis thaliana GN=PCMP-E29 PE=2 SV=1
Length = 523
Score = 59.7 bits (143), Expect = 9e-09
Identities = 32/85 (37%), Positives = 44/85 (51%)
Frame = +2
Query: 296 GITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPA 475
G + + SS+L C + L G+ VH LI+ G++ N F+S+ LI MYA+CG L+ A
Sbjct: 269 GYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENA 328
Query: 476 CSVFSETLARDTYTWNIMIGSFLCH 550
SVF R N MI H
Sbjct: 329 TSVFESISVRSVACCNSMISCLAIH 353
Score = 44.3 bits (103), Expect = 4e-04
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = +2
Query: 368 GKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPACSVFSETLARDTYTWNIMIGSFL 544
GK +H + G+ ++ + S LI MY +CG + A VF E R+ TWN MIG ++
Sbjct: 65 GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYM 123
Score = 34.3 bits (77), Expect = 0.41
Identities = 19/78 (24%), Positives = 38/78 (48%)
Frame = +2
Query: 308 NLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPACSVF 487
N+ ++S +L ++ + D ++ I + N F+ SL++ Y + G + A ++F
Sbjct: 176 NVKAWSVMLGVYVNNRKMEDARKFFEDIPEK----NAFVWSLMMSGYFRIGDVHEARAIF 231
Query: 488 SETLARDTYTWNIMIGSF 541
ARD WN +I +
Sbjct: 232 YRVFARDLVIWNTLIAGY 249
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A7PPW6 |
| Definition |
tr|A7PPW6|A7PPW6_VITVI Chromosome chr18 scaffold_24, whole genome shotgun sequence OS=Vitis vinifera |
| Align length |
108 |
| Score (bit) |
85.9 |
| E-value |
1.0e-15 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913335|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_B04.
(552 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A7PPW6|A7PPW6_VITVI Chromosome chr18 scaffold_24, whole genom... 86 1e-15
tr|Q5W964|Q5W964_PHYPA PPR986-12 OS=Physcomitrella patens PE=2 SV=1 74 7e-12
tr|A9TNX6|A9TNX6_PHYPA Predicted protein OS=Physcomitrella paten... 73 1e-11
tr|A9T480|A9T480_PHYPA Predicted protein (Fragment) OS=Physcomit... 73 1e-11
tr|Q6DXT4|Q6DXT4_GOSHI Putative pentatricopeptide repeat protein... 72 2e-11
tr|B2ZAU5|B2ZAU5_GOSAR Putative pentatricopeptide OS=Gossypium a... 72 2e-11
tr|B2ZAT1|B2ZAT1_9ROSI Putative pentatricopeptide repeat protein... 71 4e-11
tr|Q6JJ28|Q6JJ28_IPOTF Putative pentatricopeptide repeat-contain... 70 7e-11
tr|Q6DXS0|Q6DXS0_GOSHI Putative pentatricopeptide repeat protein... 70 7e-11
tr|B2ZAR9|B2ZAR9_GOSRA Putative pentatricopeptide repeat protein... 70 7e-11
tr|A9U2Q7|A9U2Q7_PHYPA Predicted protein OS=Physcomitrella paten... 70 7e-11
tr|Q5W963|Q5W963_PHYPA PPR1106-17 OS=Physcomitrella patens PE=2 ... 70 1e-10
tr|A9T5P5|A9T5P5_PHYPA Predicted protein OS=Physcomitrella paten... 70 1e-10
tr|A9T8E9|A9T8E9_PHYPA Predicted protein OS=Physcomitrella paten... 68 4e-10
tr|A7P886|A7P886_VITVI Chromosome chr3 scaffold_8, whole genome ... 67 5e-10
tr|A7QDH6|A7QDH6_VITVI Chromosome chr10 scaffold_81, whole genom... 67 6e-10
tr|B6SWY6|B6SWY6_MAIZE Pentatricopeptide repeat protein PPR1106-... 65 2e-09
tr|A9SQ58|A9SQ58_PHYPA Predicted protein OS=Physcomitrella paten... 65 2e-09
tr|A7NWP9|A7NWP9_VITVI Chromosome chr5 scaffold_2, whole genome ... 65 2e-09
tr|Q2HSF0|Q2HSF0_MEDTR Tetratricopeptide-like helical OS=Medicag... 64 4e-09
tr|A9TDA2|A9TDA2_PHYPA Predicted protein OS=Physcomitrella paten... 64 4e-09
tr|Q5W965|Q5W965_PHYPA PPR868-14 OS=Physcomitrella patens PE=2 SV=1 64 5e-09
tr|A9SDQ1|A9SDQ1_PHYPA Predicted protein OS=Physcomitrella paten... 64 5e-09
tr|A9U4W7|A9U4W7_PHYPA Predicted protein OS=Physcomitrella paten... 64 7e-09
tr|A9RJW2|A9RJW2_PHYPA Predicted protein OS=Physcomitrella paten... 64 7e-09
tr|A2ZM04|A2ZM04_ORYSI Putative uncharacterized protein OS=Oryza... 64 7e-09
tr|A2WUV3|A2WUV3_ORYSI Putative uncharacterized protein OS=Oryza... 64 7e-09
tr|A7Q4W0|A7Q4W0_VITVI Non-specific lipid-transfer protein OS=Vi... 63 1e-08
tr|Q67X36|Q67X36_ORYSJ Os06g0231400 protein OS=Oryza sativa subs... 62 2e-08
tr|B8AM27|B8AM27_ORYSI Putative uncharacterized protein OS=Oryza... 62 2e-08
>tr|A7PPW6|A7PPW6_VITVI Chromosome chr18 scaffold_24, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00021813001
PE=4 SV=1
Length = 619
Score = 85.9 bits (211), Expect = 1e-15
Identities = 45/108 (41%), Positives = 61/108 (56%)
Frame = +2
Query: 209 FCEQRRMYEALRKQVQKQEETSLDVLDQPGITLNLTSFSSLLRTCTRHKTLADGKRVHHL 388
F Q ++ EAL T LD DQ GI +N T+FSSLLR C K+L GK++H
Sbjct: 20 FARQGKLKEAL---------TILDYCDQQGIPVNPTTFSSLLRACVESKSLTHGKQIHVH 70
Query: 389 IHQAGLQTNPFLSSLLIRMYAQCGALDPACSVFSETLARDTYTWNIMI 532
I GL+ N FL + L+ MY CG+L+ A VF ++ YTWN ++
Sbjct: 71 IRINGLENNEFLRTKLVHMYTSCGSLEDARGVFDGVSSKSVYTWNALL 118
Score = 50.8 bits (120), Expect = 5e-05
Identities = 25/91 (27%), Positives = 48/91 (52%)
Frame = +2
Query: 272 SLDVLDQPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYA 451
S+ + Q G ++ + +++L C + L GK +H + G N +++ L+ MY+
Sbjct: 338 SIAWMQQEGFRPDVVTVATVLPVCAELRALRQGKEIHSYAVKNGFLPNVSIATSLMVMYS 397
Query: 452 QCGALDPACSVFSETLARDTYTWNIMIGSFL 544
+CG LD + +F AR+ +W MI S++
Sbjct: 398 KCGNLDYSFKLFDGMDARNVISWTAMIDSYV 428
Score = 41.6 bits (96), Expect = 0.028
Identities = 20/75 (26%), Positives = 39/75 (52%)
Frame = +2
Query: 317 SFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPACSVFSET 496
+ + +L C + L GK +H I + ++ PF+S+ +I+MY + GA+ A F
Sbjct: 454 AMARILSICGELRVLKLGKEIHGQILKKDFESIPFVSAEIIKMYGKFGAISKAKLAFKAI 513
Query: 497 LARDTYTWNIMIGSF 541
A+ + W +I ++
Sbjct: 514 PAKGSMAWTAIIEAY 528
Score = 34.3 bits (77), Expect = 4.5
Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +2
Query: 248 QVQKQEETSLDVLDQPGITLNLTSFSSLLRTCTRHKTLADGKRVH-HLIHQAGLQTNPFL 424
++Q++ L + + GI N +++L G+ VH +++ F+
Sbjct: 228 RLQREALEYLRWMRREGICPNSVIMTTILPVIGEVGAWKLGREVHAYVVKTKSYSKQVFI 287
Query: 425 SSLLIRMYAQCGALDPACSVFSETLARDTYTWNIMIGSFL 544
S LI MY +CG + VF + R+ +W ++ ++
Sbjct: 288 QSALIDMYCKCGDMASGRQVFYASTERNAVSWTALMSGYV 327
>tr|Q5W964|Q5W964_PHYPA PPR986-12 OS=Physcomitrella patens PE=2 SV=1
Length = 986
Score = 73.6 bits (179), Expect = 7e-12
Identities = 31/92 (33%), Positives = 59/92 (64%)
Frame = +2
Query: 275 LDVLDQPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQ 454
L+ +D I + ++S+LL+ C + K L DG+R+++ I ++G+Q + F+ + LI MYA+
Sbjct: 98 LERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAK 157
Query: 455 CGALDPACSVFSETLARDTYTWNIMIGSFLCH 550
CG A +F + +D Y+WN+++G ++ H
Sbjct: 158 CGNTISAKQIFDDMREKDVYSWNLLLGGYVQH 189
Score = 65.1 bits (157), Expect = 2e-09
Identities = 33/93 (35%), Positives = 55/93 (59%)
Frame = +2
Query: 272 SLDVLDQPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYA 451
+ L + GI N ++F+S+L C +L GK VH LI +AGL+++ +S+ L+ M+
Sbjct: 501 TFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFV 560
Query: 452 QCGALDPACSVFSETLARDTYTWNIMIGSFLCH 550
CG L A ++F++ RD +WN +I F+ H
Sbjct: 561 NCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQH 593
Score = 63.5 bits (153), Expect = 7e-09
Identities = 27/89 (30%), Positives = 48/89 (53%)
Frame = +2
Query: 284 LDQPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGA 463
+++ G+ + +F SLLR C + L GK+VH + + G T ++ + ++ MY +CG+
Sbjct: 303 MEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGS 362
Query: 464 LDPACSVFSETLARDTYTWNIMIGSFLCH 550
++ A VF R+ +W MI F H
Sbjct: 363 MEDALEVFDLVKGRNVVSWTAMIAGFAQH 391
Score = 60.8 bits (146), Expect = 4e-08
Identities = 27/90 (30%), Positives = 50/90 (55%)
Frame = +2
Query: 281 VLDQPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCG 460
++ + GI + +F+ LL C + L +G+R+H LI +A + + + LI MY +CG
Sbjct: 605 MMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCG 664
Query: 461 ALDPACSVFSETLARDTYTWNIMIGSFLCH 550
+++ A VF + ++ Y+W MI + H
Sbjct: 665 SIEDAHQVFHKLPKKNVYSWTSMIAGYAQH 694
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/87 (31%), Positives = 48/87 (55%)
Frame = +2
Query: 290 QPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALD 469
+ GI N +F S+L C+ L G+++ I +AG ++ + + L+ MYA+CG+L
Sbjct: 406 ESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLK 465
Query: 470 PACSVFSETLARDTYTWNIMIGSFLCH 550
A VF + ++ WN MI +++ H
Sbjct: 466 DAHRVFEKISKQNVVAWNAMITAYVQH 492
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/87 (31%), Positives = 44/87 (50%)
Frame = +2
Query: 290 QPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALD 469
Q + + +F S+L C + + G+ +++LI +AG T+ F+ + LI M+ +CG +
Sbjct: 204 QDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIG 263
Query: 470 PACSVFSETLARDTYTWNIMIGSFLCH 550
A VF RD TW MI H
Sbjct: 264 DATKVFDNLPTRDLVTWTSMITGLARH 290
>tr|A9TNX6|A9TNX6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_224041 PE=4 SV=1
Length = 986
Score = 72.8 bits (177), Expect = 1e-11
Identities = 31/92 (33%), Positives = 59/92 (64%)
Frame = +2
Query: 275 LDVLDQPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQ 454
L+ +D I + ++S+LL+ C + K L DG+R+++ I ++G+Q + F+ + LI MYA+
Sbjct: 98 LERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAK 157
Query: 455 CGALDPACSVFSETLARDTYTWNIMIGSFLCH 550
CG A +F + +D Y+WN+++G ++ H
Sbjct: 158 CGNTISAKQIFDDMREKDVYSWNLLLGGYVQH 189
Score = 65.1 bits (157), Expect = 2e-09
Identities = 33/93 (35%), Positives = 55/93 (59%)
Frame = +2
Query: 272 SLDVLDQPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYA 451
+ L + GI N ++F+S+L C +L GK VH LI +AGL+++ +S+ L+ M+
Sbjct: 501 TFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFV 560
Query: 452 QCGALDPACSVFSETLARDTYTWNIMIGSFLCH 550
CG L A ++F++ RD +WN +I F+ H
Sbjct: 561 NCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQH 593
Score = 63.5 bits (153), Expect = 7e-09
Identities = 27/89 (30%), Positives = 48/89 (53%)
Frame = +2
Query: 284 LDQPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGA 463
+++ G+ + +F SLLR C + L GK+VH + + G T ++ + ++ MY +CG+
Sbjct: 303 MEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGS 362
Query: 464 LDPACSVFSETLARDTYTWNIMIGSFLCH 550
++ A VF R+ +W MI F H
Sbjct: 363 MEDALEVFDLVKGRNVVSWTAMIAGFAQH 391
Score = 60.1 bits (144), Expect = 8e-08
Identities = 27/90 (30%), Positives = 50/90 (55%)
Frame = +2
Query: 281 VLDQPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCG 460
++ + GI + +F+ LL C + L +G+R+H LI +A + + + LI MY +CG
Sbjct: 605 MMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCG 664
Query: 461 ALDPACSVFSETLARDTYTWNIMIGSFLCH 550
+++ A VF + ++ Y+W MI + H
Sbjct: 665 SIEDAHQVFHKLPKKNVYSWTSMITGYAQH 694
Score = 54.3 bits (129), Expect = 4e-06
Identities = 27/87 (31%), Positives = 48/87 (55%)
Frame = +2
Query: 290 QPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALD 469
+ GI N +F S+L C+ L G+++ I +AG ++ + + L+ MYA+CG+L
Sbjct: 406 ESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLK 465
Query: 470 PACSVFSETLARDTYTWNIMIGSFLCH 550
A VF + ++ WN MI +++ H
Sbjct: 466 DAHRVFEKISKQNVVAWNAMITAYVQH 492
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/87 (31%), Positives = 44/87 (50%)
Frame = +2
Query: 290 QPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALD 469
Q + + +F S+L C + + G+ +++LI +AG T+ F+ + LI M+ +CG +
Sbjct: 204 QDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIG 263
Query: 470 PACSVFSETLARDTYTWNIMIGSFLCH 550
A VF RD TW MI H
Sbjct: 264 DATKVFDNLPTRDLVTWTSMITGLARH 290
>tr|A9T480|A9T480_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_140042 PE=4 SV=1
Length = 748
Score = 72.8 bits (177), Expect = 1e-11
Identities = 35/87 (40%), Positives = 53/87 (60%)
Frame = +2
Query: 290 QPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALD 469
Q G+ N +F ++L+ CT L G+++H I AG Q++ L + LI MYA+CG++D
Sbjct: 99 QNGVQPNEITFFNILKACTSPMALKWGRKIHDHIRHAGFQSDLRLGNALIHMYARCGSMD 158
Query: 470 PACSVFSETLARDTYTWNIMIGSFLCH 550
A VF+ + RD TWN+MIG + H
Sbjct: 159 DARLVFNGMVDRDIITWNVMIGRLVQH 185
Score = 59.7 bits (143), Expect = 1e-07
Identities = 30/89 (33%), Positives = 46/89 (51%)
Frame = +2
Query: 284 LDQPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGA 463
+ + G + + S+L C + L K VH +AGL+++ + S L+ YA+CG
Sbjct: 502 MQREGFIPDAATLVSILNACASTRALDRVKEVHSHALEAGLESDLRVGSALVHTYAKCGR 561
Query: 464 LDPACSVFSETLARDTYTWNIMIGSFLCH 550
+D A VF +RD TWN+MIG H
Sbjct: 562 IDDARLVFEGMASRDIITWNVMIGGLAQH 590
Score = 53.9 bits (128), Expect = 5e-06
Identities = 22/81 (27%), Positives = 48/81 (59%)
Frame = +2
Query: 299 ITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPAC 478
I+++ ++ +L+ +HK L K+VH I ++ ++ +P++++ L+ +Y +CG L
Sbjct: 1 ISIDSYTYVDILQKVFKHKDLVLAKQVHECIIKSEMEQHPYVANKLMSIYIRCGRLQNTR 60
Query: 479 SVFSETLARDTYTWNIMIGSF 541
VF + ++ + W IMIG +
Sbjct: 61 EVFDTLVEKNVFNWTIMIGGY 81
Score = 49.3 bits (116), Expect = 1e-04
Identities = 29/84 (34%), Positives = 43/84 (51%)
Frame = +2
Query: 284 LDQPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGA 463
+ + G NLT++ S+L L K VH A L ++ + + LI MYA+CG+
Sbjct: 401 MQREGFVPNLTTYLSILNGKASTGALEWVKEVHTHAVNAELDSHLRVGNALIHMYAKCGS 460
Query: 464 LDPACSVFSETLARDTYTWNIMIG 535
++ A VF RD +WN MIG
Sbjct: 461 IENARLVFDRMEDRDIISWNAMIG 484
Score = 48.1 bits (113), Expect = 3e-04
Identities = 27/89 (30%), Positives = 45/89 (50%)
Frame = +2
Query: 284 LDQPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGA 463
+ + G + T++ S+L L K VH +AGL+++ + + L+ MYA+ G+
Sbjct: 198 MQREGFVPDTTTYLSMLNANACTGALGWVKEVHSHALRAGLESDVRVGTALVHMYARSGS 257
Query: 464 LDPACSVFSETLARDTYTWNIMIGSFLCH 550
+ A VF + R+ TWN MIG H
Sbjct: 258 IKDARLVFDKMTERNIITWNSMIGGLAQH 286
Score = 48.1 bits (113), Expect = 3e-04
Identities = 25/80 (31%), Positives = 40/80 (50%)
Frame = +2
Query: 311 LTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPACSVFS 490
+T + L C L ++VH + GL + + + L+ MYA+CG++D A VF
Sbjct: 309 ITYVNILNNACASTGALQWVRKVHDDAAKVGLDFDVRVGNALVHMYAKCGSMDDARRVFY 368
Query: 491 ETLARDTYTWNIMIGSFLCH 550
+ RD +W +MIG H
Sbjct: 369 GMVDRDVVSWTVMIGGLAQH 388
Score = 37.7 bits (86), Expect = 0.41
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +2
Query: 227 MYEALRKQVQKQEETSLDV-LDQPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAG 403
M L + ++ E SL + + G + ++ S+L + L K VH +AG
Sbjct: 583 MIGGLAQHGREHEAFSLFLQMQDVGFVPDAITYLSILGGNVSIEALEWVKEVHRHAVRAG 642
Query: 404 LQTNPFLSSLLIRMYAQCGALDPACSVFSETLARD 508
T+P +SS L+ MY +CG +D A F+ + D
Sbjct: 643 FDTDPRVSSALVHMYTKCGDIDNAKLHFTPNMLPD 677
>tr|Q6DXT4|Q6DXT4_GOSHI Putative pentatricopeptide repeat protein
OS=Gossypium hirsutum PE=4 SV=1
Length = 805
Score = 72.0 bits (175), Expect = 2e-11
Identities = 32/87 (36%), Positives = 56/87 (64%)
Frame = +2
Query: 275 LDVLDQPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQ 454
L +++ G+ L++ + +S+L C R +L +GK VH I +++N F+ + L+ MYA+
Sbjct: 340 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAK 399
Query: 455 CGALDPACSVFSETLARDTYTWNIMIG 535
CG+++ A SVFS + +D +WN MIG
Sbjct: 400 CGSMEAANSVFSTMVVKDIISWNTMIG 426
Score = 53.5 bits (127), Expect = 7e-06
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = +2
Query: 305 LNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPACSV 484
L ++SS+L+ C K+ DGK+VH +I + + L L+ YA CG L V
Sbjct: 97 LETKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRV 156
Query: 485 FSETLARDTYTWNIMIGSF 541
F ++ Y WN M+ +
Sbjct: 157 FDTMEKKNVYLWNFMVSEY 175
Score = 52.8 bits (125), Expect = 1e-05
Identities = 28/82 (34%), Positives = 44/82 (53%)
Frame = +2
Query: 296 GITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPA 475
GI ++L + S+L C TL+ GK VH L ++ + S+ L+ MY++CG LD A
Sbjct: 246 GIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGA 305
Query: 476 CSVFSETLARDTYTWNIMIGSF 541
VF + R+ +W MI +
Sbjct: 306 LRVFEKMGERNVVSWTSMIAGY 327
Score = 43.9 bits (102), Expect = 0.006
Identities = 20/78 (25%), Positives = 39/78 (50%)
Frame = +2
Query: 317 SFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPACSVFSET 496
+ + +L C L GK +H I + G ++ +++ L+ +Y +CG L A +F
Sbjct: 434 TMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 493
Query: 497 LARDTYTWNIMIGSFLCH 550
++D +W +MI + H
Sbjct: 494 PSKDLVSWTVMIAGYGMH 511
>tr|B2ZAU5|B2ZAU5_GOSAR Putative pentatricopeptide OS=Gossypium
arboreum PE=4 SV=1
Length = 805
Score = 72.0 bits (175), Expect = 2e-11
Identities = 32/87 (36%), Positives = 56/87 (64%)
Frame = +2
Query: 275 LDVLDQPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQ 454
L +++ G+ L++ + +S+L C R +L +GK VH I +++N F+ + L+ MYA+
Sbjct: 340 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAK 399
Query: 455 CGALDPACSVFSETLARDTYTWNIMIG 535
CG+++ A SVFS + +D +WN MIG
Sbjct: 400 CGSMEAANSVFSTMVVKDIISWNTMIG 426
Score = 52.8 bits (125), Expect = 1e-05
Identities = 28/82 (34%), Positives = 44/82 (53%)
Frame = +2
Query: 296 GITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPA 475
GI ++L + S+L C TL+ GK VH L ++ + S+ L+ MY++CG LD A
Sbjct: 246 GIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGA 305
Query: 476 CSVFSETLARDTYTWNIMIGSF 541
VF + R+ +W MI +
Sbjct: 306 LRVFEKMGERNVVSWTSMIAGY 327
Score = 51.6 bits (122), Expect = 3e-05
Identities = 24/79 (30%), Positives = 38/79 (48%)
Frame = +2
Query: 305 LNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPACSV 484
L ++ S+L+ C K+ DGK+VH +I + + L L+ YA CG L V
Sbjct: 97 LETKTYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRV 156
Query: 485 FSETLARDTYTWNIMIGSF 541
F ++ Y WN M+ +
Sbjct: 157 FDTMEKKNVYLWNFMVSEY 175
Score = 43.9 bits (102), Expect = 0.006
Identities = 20/78 (25%), Positives = 39/78 (50%)
Frame = +2
Query: 317 SFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPACSVFSET 496
+ + +L C L GK +H I + G ++ +++ L+ +Y +CG L A +F
Sbjct: 434 TMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 493
Query: 497 LARDTYTWNIMIGSFLCH 550
++D +W +MI + H
Sbjct: 494 PSKDLVSWTVMIAGYGMH 511
>tr|B2ZAT1|B2ZAT1_9ROSI Putative pentatricopeptide repeat protein
OS=Gossypioides kirkii PE=4 SV=1
Length = 805
Score = 70.9 bits (172), Expect = 4e-11
Identities = 32/87 (36%), Positives = 55/87 (63%)
Frame = +2
Query: 275 LDVLDQPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQ 454
L +++ G+ L++ + +S+L C R +L +GK VH I +++N F+ + L+ MY +
Sbjct: 340 LQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTK 399
Query: 455 CGALDPACSVFSETLARDTYTWNIMIG 535
CG++D A SVFS + +D +WN MIG
Sbjct: 400 CGSMDGANSVFSTMVVKDIISWNTMIG 426
Score = 57.4 bits (137), Expect = 5e-07
Identities = 26/79 (32%), Positives = 41/79 (51%)
Frame = +2
Query: 305 LNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPACSV 484
L ++SS+L+ C K+L DGK+VH +I + + L L+ +YA CG L V
Sbjct: 97 LETKTYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRV 156
Query: 485 FSETLARDTYTWNIMIGSF 541
F ++ Y WN M+ +
Sbjct: 157 FDTMEKKNVYLWNFMVSEY 175
Score = 52.0 bits (123), Expect = 2e-05
Identities = 28/82 (34%), Positives = 44/82 (53%)
Frame = +2
Query: 296 GITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPA 475
GI ++L + S+L C TL+ GK VH L ++ + S+ L+ MY++CG LD A
Sbjct: 246 GIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGA 305
Query: 476 CSVFSETLARDTYTWNIMIGSF 541
VF + R+ +W MI +
Sbjct: 306 LRVFEKMGERNVVSWTSMIAGY 327
Score = 44.3 bits (103), Expect = 0.004
Identities = 20/78 (25%), Positives = 39/78 (50%)
Frame = +2
Query: 317 SFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPACSVFSET 496
+ + +L C L GK +H I + G ++ +++ L+ +Y +CG L A +F
Sbjct: 434 TMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 493
Query: 497 LARDTYTWNIMIGSFLCH 550
++D +W +MI + H
Sbjct: 494 PSKDLVSWTVMISGYGMH 511
>tr|Q6JJ28|Q6JJ28_IPOTF Putative pentatricopeptide repeat-containing
protein (Putative uncharacterized protein) OS=Ipomoea
trifida PE=4 SV=1
Length = 575
Score = 70.1 bits (170), Expect = 7e-11
Identities = 39/116 (33%), Positives = 55/116 (47%)
Frame = +2
Query: 203 DPFCEQRRMYEALRKQVQKQEETSLDVLDQPGITLNLTSFSSLLRTCTRHKTLADGKRVH 382
D F + R EA+R E GI N + +S+LR C L G+R+H
Sbjct: 175 DGFVDNDRPIEAIRLFTHMIEN---------GIEPNEVTVASVLRACADTGALNTGERIH 225
Query: 383 HLIHQAGLQTNPFLSSLLIRMYAQCGALDPACSVFSETLARDTYTWNIMIGSFLCH 550
+ + +N +S+ LI MYA+CG +D A VF ETL +D Y W +I H
Sbjct: 226 SFVKEKNFSSNANVSTALIDMYAKCGCIDGALEVFDETLEKDVYVWTAIIAGLASH 281
Score = 44.3 bits (103), Expect = 0.004
Identities = 19/76 (25%), Positives = 44/76 (57%)
Frame = +2
Query: 317 SFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPACSVFSET 496
++ +L+ C++ GK++H L+ ++G+ ++ ++++ LI +Y+ G + A VF +
Sbjct: 103 TYPFVLKACSKSGHARFGKQIHGLVFKSGVGSDRYINNALIHLYSVSGEPNLAYKVFDKM 162
Query: 497 LARDTYTWNIMIGSFL 544
RD +W +I F+
Sbjct: 163 PDRDVVSWTSIIDGFV 178
>tr|Q6DXS0|Q6DXS0_GOSHI Putative pentatricopeptide repeat protein
OS=Gossypium hirsutum PE=4 SV=1
Length = 805
Score = 70.1 bits (170), Expect = 7e-11
Identities = 31/87 (35%), Positives = 55/87 (63%)
Frame = +2
Query: 275 LDVLDQPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQ 454
L +++ G+ L++ + +S+L C R +L +GK VH I + +N F+ + L+ MYA+
Sbjct: 340 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAK 399
Query: 455 CGALDPACSVFSETLARDTYTWNIMIG 535
CG+++ A SVFS + +D +WN M+G
Sbjct: 400 CGSMEGANSVFSTMVVKDIISWNTMVG 426
Score = 53.5 bits (127), Expect = 7e-06
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = +2
Query: 305 LNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPACSV 484
L ++ S+L+ C K+L DGK+VH +I + + L L+ YA CG L V
Sbjct: 97 LETKTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRV 156
Query: 485 FSETLARDTYTWNIMIGSF 541
F ++ Y WN M+ +
Sbjct: 157 FDTMEKKNVYLWNFMVSEY 175
Score = 52.8 bits (125), Expect = 1e-05
Identities = 28/82 (34%), Positives = 44/82 (53%)
Frame = +2
Query: 296 GITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPA 475
GI ++L + S+L C TL+ GK VH L ++ + S+ L+ MY++CG LD A
Sbjct: 246 GIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGA 305
Query: 476 CSVFSETLARDTYTWNIMIGSF 541
VF + R+ +W MI +
Sbjct: 306 LRVFEKMGERNVVSWTSMIAGY 327
Score = 44.3 bits (103), Expect = 0.004
Identities = 20/78 (25%), Positives = 39/78 (50%)
Frame = +2
Query: 317 SFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPACSVFSET 496
+ + +L C L GK +H I + G ++ +++ L+ +Y +CG L A +F
Sbjct: 434 TMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 493
Query: 497 LARDTYTWNIMIGSFLCH 550
++D +W +MI + H
Sbjct: 494 PSKDLVSWTVMIAGYGMH 511
>tr|B2ZAR9|B2ZAR9_GOSRA Putative pentatricopeptide repeat protein
(Fragment) OS=Gossypium raimondii PE=4 SV=1
Length = 667
Score = 70.1 bits (170), Expect = 7e-11
Identities = 31/87 (35%), Positives = 55/87 (63%)
Frame = +2
Query: 275 LDVLDQPGITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQ 454
L +++ G+ L++ + +S+L C R +L +GK VH I + +N F+ + L+ MYA+
Sbjct: 202 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAK 261
Query: 455 CGALDPACSVFSETLARDTYTWNIMIG 535
CG+++ A SVFS + +D +WN M+G
Sbjct: 262 CGSMEGANSVFSTMVVKDIISWNTMVG 288
Score = 53.5 bits (127), Expect = 7e-06
Identities = 28/82 (34%), Positives = 45/82 (54%)
Frame = +2
Query: 296 GITLNLTSFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPA 475
GI ++L + S+L C + TL+ GK VH L ++ + S+ L+ MY++CG LD A
Sbjct: 108 GIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGA 167
Query: 476 CSVFSETLARDTYTWNIMIGSF 541
VF + R+ +W MI +
Sbjct: 168 LRVFEKMGERNVVSWTSMIAGY 189
Score = 44.3 bits (103), Expect = 0.004
Identities = 20/78 (25%), Positives = 39/78 (50%)
Frame = +2
Query: 317 SFSSLLRTCTRHKTLADGKRVHHLIHQAGLQTNPFLSSLLIRMYAQCGALDPACSVFSET 496
+ + +L C L GK +H I + G ++ +++ L+ +Y +CG L A +F
Sbjct: 296 TMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 355
Query: 497 LARDTYTWNIMIGSFLCH 550
++D +W +MI + H
Sbjct: 356 PSKDLVSWTVMIAGYGMH 373
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