BP913339
Clone id YMU001_000029_B08
Library
Length 359
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000029_B08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TGAGAACAGTCCTTCATACCCTTCCACAAGGGCGCGTCCTATAGCAAAGCTTGATATCCA
CAAAAGAGCATAAGAAAAACTTCAAAGTGTCAAGATCCCTGCCAATAGAAGCGCCAATCT
TCACGAACGTCGACAATCATCAAAGGGAAATCCTCTTGCCCGAGGACTCGATTGACAGAC
AGACAACACATATCCTCAAACACATGAAAAGTCCTGCACCTGCTTATCCTGATGTCGGAT
CCGACATACACATCATAGCACCATCTGCCTTCCAAGTCTTGAGATCGACAAATGACCTAT
ACAGTGGCGCCTTTGGCATACACATCCGGGCAGTAGAGTGTCCTGCAGACAGTCTGTCC
■■Homology search results ■■ -
sp_hit_id Q8NHP7
Definition sp|Q8NHP7|EXDL1_HUMAN Exonuclease 3'-5' domain-like-containing protein 1 OS=Homo sapiens
Align length 62
Score (bit) 30.0
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913339|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_B08.
(359 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8NHP7|EXDL1_HUMAN Exonuclease 3'-5' domain-like-containing p... 30 3.8
sp|P48551|INAR2_HUMAN Interferon-alpha/beta receptor beta chain ... 30 4.9
sp|Q95L39|LOXL1_BOVIN Lysyl oxidase homolog 1 OS=Bos taurus GN=L... 29 6.5
sp|Q9SYC8|LPAT3_ARATH 1-acyl-sn-glycerol-3-phosphate acyltransfe... 29 8.4
sp|P25792|CYSP_SCHMA Cathepsin B-like cysteine proteinase OS=Sch... 29 8.4

>sp|Q8NHP7|EXDL1_HUMAN Exonuclease 3'-5' domain-like-containing
protein 1 OS=Homo sapiens GN=EXDL1 PE=2 SV=3
Length = 514

Score = 30.0 bits (66), Expect = 3.8
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3

Query: 9 VLHTLPQGRVL*QSLISTKEHKKNFKVSRSLPIE-APIFTNVDNHQREILLPEDSIDRQT 185
++ T+ Q + L +E K F ++ I+ AP FT+ D H LL E+S+++Q
Sbjct: 330 LIRTVLQPKKLVTETAGKEEKVKGFLFGKNFRIDKAPSFTSQDFHGDVNLLKEESLNKQA 389

Query: 186 TH 191
T+
Sbjct: 390 TN 391


>sp|P48551|INAR2_HUMAN Interferon-alpha/beta receptor beta chain
OS=Homo sapiens GN=IFNAR2 PE=1 SV=1
Length = 515

Score = 29.6 bits (65), Expect = 4.9
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3

Query: 105 IEAPIFTNVDNHQREILLPEDSIDRQTTHILKHMKSPAPAYPDVGSD 245
+EAP+ + +H E++ PED + Q+ H+L + P +P S+
Sbjct: 443 LEAPLM--LSSHLEEMVDPEDPDNVQSNHLLASGEGTQPTFPSPSSE 487


>sp|Q95L39|LOXL1_BOVIN Lysyl oxidase homolog 1 OS=Bos taurus
GN=LOXL1 PE=1 SV=1
Length = 591

Score = 29.3 bits (64), Expect = 6.5
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3

Query: 159 PEDSIDRQTTHILKHMKSPA--PAYPDVGSD 245
P D +DR+ +H L H + PAYPD G D
Sbjct: 263 PADGLDRRYSHSLYHEGTAGLEPAYPDPGPD 293


>sp|Q9SYC8|LPAT3_ARATH 1-acyl-sn-glycerol-3-phosphate
acyltransferase 3 OS=Arabidopsis thaliana GN=LPAT3 PE=2
SV=1
Length = 376

Score = 28.9 bits (63), Expect = 8.4
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -1

Query: 266 RWCYDVYVGSDIRISRCRTFHVFEDMCCLSVNRVLGQEDFPLMIV 132
+WC D+++ D ++ + T VF D+ +NR + PL++V
Sbjct: 269 QWCQDLFITKDAQLEKYFTKDVFSDLEVHQINRPIK----PLIVV 309


>sp|P25792|CYSP_SCHMA Cathepsin B-like cysteine proteinase
OS=Schistosoma mansoni PE=2 SV=1
Length = 340

Score = 28.9 bits (63), Expect = 8.4
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1

Query: 19 PFHKGASYSKA*YPQ--KSIRKTSKCQDPCQ*KRQSSRTSTIIKGKSS 156
PF K ++K YP I T +C+ CQ K ++ T +GKSS
Sbjct: 191 PFPKCEHHTKGKYPPCGSKIYNTPRCKQTCQRKYKTPYTQDKHRGKSS 238


tr_hit_id Q9FLK4
Definition tr|Q9FLK4|Q9FLK4_ARATH Dimethylaniline monooxygenase (N-oxide-forming)-like protein (Putative uncharacterized protein At5g61290) (Putative uncharacterized protein At5g61290/mfb13_60) OS=Arabidopsis thaliana
Align length 89
Score (bit) 33.5
E-value 5.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913339|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_B08.
(359 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9FLK4|Q9FLK4_ARATH Dimethylaniline monooxygenase (N-oxide-fo... 33 5.5

>tr|Q9FLK4|Q9FLK4_ARATH Dimethylaniline monooxygenase
(N-oxide-forming)-like protein (Putative uncharacterized
protein At5g61290) (Putative uncharacterized protein
At5g61290/mfb13_60) OS=Arabidopsis thaliana
GN=At5g61290/mfb13_60 PE=2 SV=1
Length = 461

Score = 33.5 bits (75), Expect = 5.5
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Frame = -1

Query: 314 KGATV*VICRSQDLEGRWCYDVYVGSDIRISRCRTFHV----FEDMCCLSVNRVLGQEDF 147
+G V V+ ++ D+ G+W Y V + + + +T V + + S V+G DF
Sbjct: 35 EGHKVVVMEQNHDVGGQWLYQPNVDEEDTLGKTKTLKVHSSVYSSLRLASPREVMGFSDF 94

Query: 146 PLMIVDVREDWRFYWQGS*HFEVFLMLFC 60
P + + R+ RF G ++L FC
Sbjct: 95 PFIAKEGRDSRRF--PGHEELLLYLKDFC 121