BP913343 |
Clone id |
YMU001_000029_B12 |
Library |
YMU01 |
Length |
571 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000029_B12. |
Accession |
BP913343 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TTCACCTCAAGACTAAACCATCAACTAGCCAAAACAAGGGGAGACCAACCCCGAGTACAA AAAAACTAACATCATCATATTGACATATCCTCCGAGAAGGGCGGGGCCCAGGTCCCCATC ACCAAAAGAGACAACACAGAGTGCCACCATGCCATCACCCCTGCCACATGTTGACTGAAT GCCCTCTGAAGATCTCCAAATACCACCGCAGCACAAAATAATCGTAGGTCCACCGTGACA AAGCAGATCGTAGCAAACCAAAACGAAAATAAACCAGATCGTAGCAGACCAAAACCAAAA TGCACAGTAGAACCACCATGAGTTGACGCCACCAGCATGTTTAGCCATGCCATTGCCAAG ACATGCCGCCGACCCACAACATCCCAAGAGTCTCACACACCCAGTAGGAGAAGAGACCAA TCCATCATTGCAAACTCACGAACCATATGCATCAAGCTTTTGGGGTAGAGCCAAGCACCC TCCAACCCTGAAAGGGTGAACCCCTAGGACGCCATAGGGCGAGGAGCCCCTGCCACGAGC ACTCCGACCTTCCCAAGGCGAAATTGCCTCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O53657 |
Definition |
sp|O53657|MMPL3_MYCTU Putative membrane protein mmpL3 OS=Mycobacterium tuberculosis |
Align length |
66 |
Score (bit) |
33.5 |
E-value |
0.77 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B3M6P9 |
Definition |
tr|B3M6P9|B3M6P9_DROAN GF24919 OS=Drosophila ananassae |
Align length |
194 |
Score (bit) |
41.2 |
E-value |
0.041 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913343|Adiantum capillus-veneris mRNA, clone: YMU001_000029_B12. (571 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B3M6P9|B3M6P9_DROAN GF24919 OS=Drosophila ananassae GN=GF2491... 41 0.041 tr|A3WMT8|A3WMT8_9GAMM Putative uncharacterized protein OS=Idiom... 39 0.27 tr|B7ISC4|B7ISC4_BACCE Branched-chain amino acid ABC transporter... 37 0.77 tr|Q3EWR2|Q3EWR2_BACTI Branched-chain amino acid transport syste... 37 1.00 tr|B5UQV9|B5UQV9_BACCE Branched-chain amino acid ABC transporter... 37 1.00 tr|Q27QB2|Q27QB2_FUSOX GATA transcription factor FNR1 OS=Fusariu... 36 1.3 tr|Q94JZ6|Q94JZ6_ARATH Protein kinase-like protein (At3g24600) O... 35 2.3 tr|Q7S6V6|Q7S6V6_NEUCR Predicted protein OS=Neurospora crassa GN... 35 2.3 tr|B2G9M4|B2G9M4_LACRJ Glycerol uptake facilitator protein PduF ... 35 3.0 tr|A5VMB7|A5VMB7_LACRD Major intrinsic protein OS=Lactobacillus ... 35 3.0 tr|B3XLK7|B3XLK7_LACRE Major intrinsic protein OS=Lactobacillus ... 35 3.0 tr|Q8J1Y5|Q8J1Y5_ASHGO Wal1 protein OS=Ashbya gossypii GN=WAL1 P... 35 3.0 tr|Q74ZB4|Q74ZB4_ASHGO AGR285Wp OS=Ashbya gossypii GN=AGR285W PE... 35 3.0 tr|Q9LV48|Q9LV48_ARATH Protein kinase-like protein (At3g24550) (... 35 3.9 tr|Q6QJ28|Q6QJ28_ARATH Putative uncharacterized protein (Fragmen... 35 3.9 tr|Q30BN4|Q30BN4_ADEG8 Putative uncharacterized protein OS=Avian... 32 4.7 tr|Q2F7J4|Q2F7J4_LACRE Glycerol uptake facilitator protein OS=La... 34 5.0 tr|B4N5X3|B4N5X3_DROWI GK17958 OS=Drosophila willistoni GN=GK179... 34 5.0 tr|B3M139|B3M139_DROAN GF16084 OS=Drosophila ananassae GN=GF1608... 34 5.0 tr|B0WE23|B0WE23_CULQU Serine protease OS=Culex quinquefasciatus... 25 6.3 tr|B3RKW1|B3RKW1_TRIAD Putative uncharacterized protein OS=Trich... 34 6.6 tr|A4QV71|A4QV71_MAGGR Putative uncharacterized protein OS=Magna... 34 6.6 tr|A8WX31|A8WX31_CAEBR Putative uncharacterized protein OS=Caeno... 33 8.5 tr|Q7U2K5|Q7U2K5_MYCBO POSSIBLE CONSERVED TRANSMEMBRANE TRANSPOR... 33 8.6 tr|A5TYT1|A5TYT1_MYCTA Putative conserved transmembrane transpor... 33 8.6 tr|A1KF26|A1KF26_MYCBP Conserved transmembrane transport protein... 33 8.6 tr|B4W483|B4W483_9CYAN Putative uncharacterized protein OS=Micro... 33 8.6 tr|A3Z221|A3Z221_9SYNE Putative uncharacterized protein OS=Synec... 33 8.6 tr|A2VND0|A2VND0_MYCTU Transmembrane transport protein mmpL3 OS=... 33 8.6 tr|A1QMY3|A1QMY3_MYCTF Transmembrane transport protein mmpL3 OS=... 33 8.6
>tr|B3M6P9|B3M6P9_DROAN GF24919 OS=Drosophila ananassae GN=GF24919 PE=4 SV=1 Length = 2235
Score = 41.2 bits (95), Expect = 0.041 Identities = 55/194 (28%), Positives = 81/194 (41%), Gaps = 12/194 (6%) Frame = +1
Query: 22 QLAKTRGDQPRVQKN*HHHIDISSEKGGAQVPITKRDNTECHHAITPA-TC*LNAL*RSP 198 QL K + + P+ ++ H SE G+Q P + + HH TPA L +P Sbjct: 67 QLKKQKQELPQPEQQQSH-----SEDSGSQKPSYRGQHPHFHHHTTPAYYTDLQLRIHTP 121
Query: 199 NTT---AAQNNRR---STVTKQIVANQNENKPDRSRPK-PKCTVEPP*VDATSMFSHAIA 357 N + A N R ST + Q+V +RS PK K TV PP ++++ A Sbjct: 122 NASDVGALNENYRSVYSTPSTQLV-------EERSFPKSSKATVAPPPINSSPPAPAQAA 174
Query: 358 KTC--RRPTTSQESHTPSRRRDQSIIANSRTICIKLLG*SQAPSNPERVNP--*DAIGRG 525 + R + S +SHT RRR S C + S +P+ E ++ GR Sbjct: 175 RGAFFRGDSASSDSHT--RRRSLFPRTGSEGRCFRFSQASASPTKGEVISTTVTATTGRT 232
Query: 526 APATSTPTFPRRNC 567 P ST T +C Sbjct: 233 TPLASTTTSITSSC 246
>tr|A3WMT8|A3WMT8_9GAMM Putative uncharacterized protein OS=Idiomarina baltica OS145 GN=OS145_11052 PE=4 SV=1 Length = 98
Score = 38.5 bits (88), Expect = 0.27 Identities = 20/67 (29%), Positives = 30/67 (44%) Frame = +1
Query: 220 NRRSTVTKQIVANQNENKPDRSRPKPKCTVEPP*VDATSMFSHAIAKTCRRPTTSQESHT 399 ++RS + A+ N+ RS P P +PP H +TC +P S S T Sbjct: 21 HKRSCTASRREADANKACGKRSEPHPSLAAQPPSKHKDRTQPHGAKRTCTQPAASAASRT 80
Query: 400 PSRRRDQ 420 P+ RR + Sbjct: 81 PAWRRSR 87
>tr|B7ISC4|B7ISC4_BACCE Branched-chain amino acid ABC transporter, permease protein OS=Bacillus cereus G9842 GN=BCG9842_B3407 PE=4 SV=1 Length = 298
Score = 37.0 bits (84), Expect = 0.77 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%) Frame = -3
Query: 362 VLAMAWLNMLVASTHGGSTVHFGFGLLRSGLFSFWFAT---ICFVTVDLRLFCAAVVFGD 192 VLA W + THGG FG + F+F++ + +CF+ + LRLF + + G Sbjct: 97 VLAEKWRGL----THGGDGFTFGVPEIFRDRFTFYYVSLVCLCFIFILLRLFTKSSI-GK 151
Query: 191 LQRAFSQHVAGVMAWWHSVLSLLVMGT 111 + +A SQ+ V A + VL ++ + Sbjct: 152 VLKAISQNEQRVEALGYKVLQYKIIAS 178
>tr|Q3EWR2|Q3EWR2_BACTI Branched-chain amino acid transport system permease protein livM OS=Bacillus thuringiensis serovar israelensis ATCC 35646 GN=RBTH_06082 PE=4 SV=1 Length = 340
Score = 36.6 bits (83), Expect = 1.00 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%) Frame = -3
Query: 362 VLAMAWLNMLVASTHGGSTVHFGFGLLRSGLFSFWFAT---ICFVTVDLRLFCAAVVFGD 192 VLA W + THGG FG + F+F++ + +CF+ + LRLF + + G Sbjct: 139 VLAEKWRGL----THGGDGFTFGVPEIFRDRFTFYYVSLVCLCFIFILLRLFTKSSI-GK 193
Query: 191 LQRAFSQHVAGVMAWWHSVLSLLVMGT 111 + +A SQ+ V A + VL ++ + Sbjct: 194 VLKAISQNEQRVEALGYKVLHYKIIAS 220
>tr|B5UQV9|B5UQV9_BACCE Branched-chain amino acid ABC transporter, permease protein OS=Bacillus cereus AH1134 GN=BCAH1134_1926 PE=4 SV=1 Length = 298
Score = 36.6 bits (83), Expect = 1.00 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%) Frame = -3
Query: 362 VLAMAWLNMLVASTHGGSTVHFGFGLLRSGLFSFWFAT---ICFVTVDLRLFCAAVVFGD 192 VLA W + THGG FG + F+F++ + +CF+ + LRLF + + G Sbjct: 97 VLAEKWRGL----THGGDGFTFGVPEIFRDRFTFYYVSLVCLCFIFILLRLFTKSSI-GK 151
Query: 191 LQRAFSQHVAGVMAWWHSVLSLLVMGT 111 + +A SQ+ V A + VL ++ + Sbjct: 152 VLKAISQNEQRVEALGYKVLHYKIIAS 178
>tr|Q27QB2|Q27QB2_FUSOX GATA transcription factor FNR1 OS=Fusarium oxysporum f. sp. lycopersici GN=Fnr1 PE=4 SV=1 Length = 906
Score = 36.2 bits (82), Expect = 1.3 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +1
Query: 190 RSPNTTAAQNNRRSTVTKQIVANQNENKPDRSRPKPKCTVEP 315 RS T +A N+R+++ A N KP+ S P PK T P Sbjct: 692 RSKKTASALNSRKNSTLSMSTATANSTKPNSSNPTPKVTTPP 733
>tr|Q94JZ6|Q94JZ6_ARATH Protein kinase-like protein (At3g24600) OS=Arabidopsis thaliana GN=MOB24.13 PE=2 SV=1 Length = 652
Score = 35.4 bits (80), Expect = 2.3 Identities = 38/138 (27%), Positives = 53/138 (38%), Gaps = 8/138 (5%) Frame = +2
Query: 146 TMPSPLPHVD*MPSEDLQIPPQHKIIVGPP*QSRS*QTKTKINQIVADQNQNAQ*NHHEL 325 T PSP P PS PP + PP + S T + + N+ Sbjct: 9 TTPSPSP-----PS-----PPTNSTTTTPPPAASSPPPTTTPSSPPPSPSTNST------ 52
Query: 326 TPPACLAMPLPRHAADPQHPKSLTHPVGEETNPSLQTHEPYASSFWGRAKHPP------- 484 +PP + PLP P P SLT P+ + + + T P + + + PP Sbjct: 53 SPPP--SSPLPPSLPPPSPPGSLTPPIPQPSPSAPITPSPPSPTTPSNPRSPPSPNQGPP 110
Query: 485 -TLKG*TPRTP*GEEPLP 535 T G TPRTP +P P Sbjct: 111 NTPSGSTPRTPSNTKPSP 128
>tr|Q7S6V6|Q7S6V6_NEUCR Predicted protein OS=Neurospora crassa GN=NCU05609 PE=4 SV=2 Length = 300
Score = 35.4 bits (80), Expect = 2.3 Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 1/77 (1%) Frame = -2
Query: 549 GRSARGRGSSPYGVLGVHPFRVGGCLALPQKLDAYGS*-VCNDGLVSSPTGCVRLLGCCG 373 G + G GS+ G VG C+ L A G C+ G + TGC R C Sbjct: 155 GGGSGGSGSNTCSAAGKENCDVGWCMPLGSVCCATGEGWYCDSGFYCTETGCCRNGRTCS 214
Query: 372 SAACLGNGMAKHAGGVN 322 S+ G+G + GG N Sbjct: 215 SSGGSGSGGGGNGGGSN 231
>tr|B2G9M4|B2G9M4_LACRJ Glycerol uptake facilitator protein PduF OS=Lactobacillus reuteri (strain JCM 1112) GN=LAR_1640 PE=4 SV=1 Length = 235
Score = 35.0 bits (79), Expect = 3.0 Identities = 16/54 (29%), Positives = 25/54 (46%) Frame = -2
Query: 375 GSAACLGNGMAKHAGGVNSWWFYCAFWFWSATIWFIFVLVCYDLLCHGGPTIIL 214 G+ C GN + K G + WWF C W + T+ ++V L H P + + Sbjct: 18 GAGCCAGNSLNKTYGKQSGWWFICISWGLAVTMG-VYVAGFLGSLGHLNPAVTI 70
>tr|A5VMB7|A5VMB7_LACRD Major intrinsic protein OS=Lactobacillus reuteri (strain DSM 20016) GN=Lreu_1752 PE=3 SV=1 Length = 235
Score = 35.0 bits (79), Expect = 3.0 Identities = 16/54 (29%), Positives = 25/54 (46%) Frame = -2
Query: 375 GSAACLGNGMAKHAGGVNSWWFYCAFWFWSATIWFIFVLVCYDLLCHGGPTIIL 214 G+ C GN + K G + WWF C W + T+ ++V L H P + + Sbjct: 18 GAGCCAGNSLNKTYGKQSGWWFICISWGLAVTMG-VYVAGFLGSLGHLNPAVTI 70
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