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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913347
Clone id YMU001_000029_C04
Library
Length 469
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000029_C04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CAAACTCACAAAACTTGAAGAATGTTATCACTAGAATAATAAGAATGCAGGTGTAAGAAT
GCTGTACATATGAAATGTGAAGAGGAGACCCCAATGGGACAGCCCCATTGCCACATCAAA
AATCTCTGTGGTATCAACTGGGGATCCGACGATGTGCAAAATTCCCGGTGGGCGGATGTG
CCCGGCTTTGATACCAACCCCGGGATTGACATGGCTCAAGAACCACATTCCAAGGAGTGA
TAGTGGGCACACTCCCATCACATAACGAGCTTGTGTGTTGTGCTTGCAAAGTAAGCTTAC
TAGCTTACAAAGATGGAGGACAGCGTGTTGAAGGGGTAATGTCCATGGGGTAGCTGCCAA
GGACCCTTAGAAAGCTTGTAAACTCTTGTACCTCGCGCAAAGCATTTTGAGCCCTCTCGT
CTGTCATGGAAGCTTCAAAATCTATGTAAAAGAGGTACTCAAAGTACTT
■■Homology search results ■■ -
sp_hit_id O67085
Definition sp|O67085|PHEA_AQUAE P-protein OS=Aquifex aeolicus
Align length 41
Score (bit) 49.3
E-value 8.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913347|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_C04.
         (469 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O67085|PHEA_AQUAE P-protein OS=Aquifex aeolicus GN=pheA PE=4 ...    49   8e-06
sp|Q02286|PHEA_ENTAG P-protein OS=Enterobacter agglomerans GN=ph...    44   5e-04
sp|Q9ZHY3|PHEA_NEIG1 P-protein OS=Neisseria gonorrhoeae (strain ...    42   0.002
sp|P57472|PHEA_BUCAI P-protein OS=Buchnera aphidicola subsp. Acy...    42   0.002
sp|Q8K9F8|PHEA_BUCAP P-protein OS=Buchnera aphidicola subsp. Sch...    40   0.004
sp|P0A9K0|PHEA_SHIFL P-protein OS=Shigella flexneri GN=pheA PE=3...    40   0.007
sp|P43900|PHEA_HAEIN P-protein OS=Haemophilus influenzae GN=pheA...    40   0.007
sp|P0A9J8|PHEA_ECOLI P-protein OS=Escherichia coli (strain K12) ...    40   0.007
sp|P0A9J9|PHEA_ECO57 P-protein OS=Escherichia coli O157:H7 GN=ph...    40   0.007
sp|Q58054|PHEA_METJA Prephenate dehydratase OS=Methanocaldococcu...    37   0.057
sp|A2VEC9|SSPO_HUMAN SCO-spondin OS=Homo sapiens GN=SSPO PE=2 SV=1     32   1.8  
sp|Q3ZBG8|CE045_BOVIN UPF0544 protein C5orf45 homolog OS=Bos tau...    32   1.8  
sp|Q44104|PHEA_AMYME Prephenate dehydratase OS=Amycolatopsis met...    30   4.1  
sp|Q7VRU2|DNLJ_BLOFL DNA ligase OS=Blochmannia floridanus GN=lig...    30   4.1  
sp|Q9HZ67|PHEA_PSEAE P-protein OS=Pseudomonas aeruginosa GN=pheA...    30   5.3  
sp|P27603|PHEA_PSEST P-protein OS=Pseudomonas stutzeri GN=pheA P...    30   6.9  
sp|Q3SZU4|CDO1_BOVIN Cysteine dioxygenase type 1 OS=Bos taurus G...    30   6.9  
sp|Q924Y4|GATA2_RAT Endothelial transcription factor GATA-2 OS=R...    29   9.1  
sp|O09100|GATA2_MOUSE Endothelial transcription factor GATA-2 OS...    29   9.1  
sp|P23769|GATA2_HUMAN Endothelial transcription factor GATA-2 OS...    29   9.1  

>sp|O67085|PHEA_AQUAE P-protein OS=Aquifex aeolicus GN=pheA PE=4
           SV=1
          Length = 362

 Score = 49.3 bits (116), Expect = 8e-06
 Identities = 20/41 (48%), Positives = 31/41 (75%)
 Frame = -1

Query: 469 KYFEYLFYIDFEASMTDERAQNALREVQEFTSFLRVLGSYP 347
           K ++Y+F++D E    +ER + AL+E++E T FL+VLGSYP
Sbjct: 316 KAWDYVFFVDLEGHKEEERVEKALKELKEKTQFLKVLGSYP 356


>sp|Q02286|PHEA_ENTAG P-protein OS=Enterobacter agglomerans GN=pheA
           PE=4 SV=1
          Length = 387

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 19/41 (46%), Positives = 28/41 (68%)
 Frame = -1

Query: 463 FEYLFYIDFEASMTDERAQNALREVQEFTSFLRVLGSYPMD 341
           +E +FYID + ++  ER Q AL+E+Q  T  L+VLG YP +
Sbjct: 338 WEEMFYIDVQGNLQSERMQQALQELQTMTRSLKVLGCYPSE 378


>sp|Q9ZHY3|PHEA_NEIG1 P-protein OS=Neisseria gonorrhoeae (strain
           ATCC 700825 / FA 1090) GN=pheA PE=4 SV=2
          Length = 362

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = -1

Query: 463 FEYLFYIDFEASMTDERAQNALREVQEFTSFLRVLGSYP 347
           +EYLF+ID E    D + Q AL  + E  SF++ +GSYP
Sbjct: 320 WEYLFFIDIEGHRRDAQIQTALERLGERASFVKAIGSYP 358


>sp|P57472|PHEA_BUCAI P-protein OS=Buchnera aphidicola subsp.
           Acyrthosiphon pisum GN=pheA PE=4 SV=1
          Length = 385

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 17/45 (37%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
 Frame = -1

Query: 463 FEYLFYIDFEASMTDERAQNALREVQEFTSFLRVLGSYPMD-ITP 332
           +E +FYID + +++    Q+AL ++++ T F+++LG YP + ITP
Sbjct: 338 WEEMFYIDIQVNLSSTLMQDALEKIKKITRFIKILGCYPSEKITP 382


>sp|Q8K9F8|PHEA_BUCAP P-protein OS=Buchnera aphidicola subsp.
           Schizaphis graminum GN=pheA PE=4 SV=1
          Length = 385

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = -1

Query: 463 FEYLFYIDFEASMTDERAQNALREVQEFTSFLRVLGSYPMD-ITP 332
           +E +FYID +A+++    Q  L ++ + T F+++LG YP + ITP
Sbjct: 338 WEEMFYIDVQANLSSSLMQETLEKIGKITKFIKILGCYPSENITP 382


>sp|P0A9K0|PHEA_SHIFL P-protein OS=Shigella flexneri GN=pheA PE=3
           SV=1
          Length = 386

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 16/41 (39%), Positives = 27/41 (65%)
 Frame = -1

Query: 463 FEYLFYIDFEASMTDERAQNALREVQEFTSFLRVLGSYPMD 341
           +E +FY+D +A++     Q AL+E+ E T  ++VLG YP +
Sbjct: 338 WEEMFYLDIQANLESAEMQKALKELGEITRSMKVLGCYPSE 378


>sp|P43900|PHEA_HAEIN P-protein OS=Haemophilus influenzae GN=pheA
           PE=4 SV=1
          Length = 385

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 15/44 (34%), Positives = 31/44 (70%)
 Frame = -1

Query: 469 KYFEYLFYIDFEASMTDERAQNALREVQEFTSFLRVLGSYPMDI 338
           K +E +FY++ EA++     + AL E++ ++++L++LG YP +I
Sbjct: 336 KPWEEMFYLEIEANIHHPDTKQALEELKNYSNYLKILGCYPSEI 379


>sp|P0A9J8|PHEA_ECOLI P-protein OS=Escherichia coli (strain K12)
           GN=pheA PE=1 SV=1
          Length = 386

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 16/41 (39%), Positives = 27/41 (65%)
 Frame = -1

Query: 463 FEYLFYIDFEASMTDERAQNALREVQEFTSFLRVLGSYPMD 341
           +E +FY+D +A++     Q AL+E+ E T  ++VLG YP +
Sbjct: 338 WEEMFYLDIQANLESAEMQKALKELGEITRSMKVLGCYPSE 378


>sp|P0A9J9|PHEA_ECO57 P-protein OS=Escherichia coli O157:H7 GN=pheA
           PE=3 SV=1
          Length = 386

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 16/41 (39%), Positives = 27/41 (65%)
 Frame = -1

Query: 463 FEYLFYIDFEASMTDERAQNALREVQEFTSFLRVLGSYPMD 341
           +E +FY+D +A++     Q AL+E+ E T  ++VLG YP +
Sbjct: 338 WEEMFYLDIQANLESAEMQKALKELGEITRSMKVLGCYPSE 378


>sp|Q58054|PHEA_METJA Prephenate dehydratase OS=Methanocaldococcus
           jannaschii GN=pheA PE=1 SV=1
          Length = 272

 Score = 36.6 bits (83), Expect = 0.057
 Identities = 15/38 (39%), Positives = 26/38 (68%)
 Frame = -1

Query: 457 YLFYIDFEASMTDERAQNALREVQEFTSFLRVLGSYPM 344
           Y+FYIDFE +   E+ +  L+ ++  T+F+ +LG YP+
Sbjct: 235 YIFYIDFENNK--EKLEEILKSLERHTTFINLLGKYPV 270
tr_hit_id B8LLZ1
Definition tr|B8LLZ1|B8LLZ1_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 46
Score (bit) 85.5
E-value 1.0e-15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913347|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_C04.
         (469 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LLZ1|B8LLZ1_PICSI Putative uncharacterized protein OS=Picea...    86   1e-15
tr|Q6JJ29|Q6JJ29_IPOTF Prephenate dehydratase (Putative uncharac...    85   2e-15
tr|B5LAT0|B5LAT0_CAPAN Putative arogenate dehydratase OS=Capsicu...    85   2e-15
tr|Q9SGD6|Q9SGD6_ARATH T23G18.10 (Arogenate dehydratase isoform ...    84   4e-15
tr|A9PHG2|A9PHG2_POPTR Putative uncharacterized protein OS=Popul...    84   4e-15
tr|A9NXE9|A9NXE9_PICSI Putative uncharacterized protein OS=Picea...    84   5e-15
tr|A5BWG3|A5BWG3_VITVI Putative uncharacterized protein OS=Vitis...    84   5e-15
tr|B7X944|B7X944_HEVBR Prephenate dehydratase OS=Hevea brasilien...    83   6e-15
tr|Q9FNJ8|Q9FNJ8_ARATH Chorismate mutase/prephenate dehydratase-...    83   8e-15
tr|Q650W1|Q650W1_ORYSJ Os09g0565700 protein OS=Oryza sativa subs...    82   1e-14
tr|Q650V6|Q650V6_ORYSJ Putative prephenate dehydratase OS=Oryza ...    82   1e-14
tr|Q0IZJ9|Q0IZJ9_ORYSJ Os09g0566000 protein OS=Oryza sativa subs...    82   1e-14
tr|A3C1L2|A3C1L2_ORYSJ Putative uncharacterized protein OS=Oryza...    82   1e-14
tr|A3C1K9|A3C1K9_ORYSJ Putative uncharacterized protein OS=Oryza...    82   1e-14
tr|A2Z456|A2Z456_ORYSI Putative uncharacterized protein OS=Oryza...    82   1e-14
tr|A2Z452|A2Z452_ORYSI Putative uncharacterized protein OS=Oryza...    82   1e-14
tr|Q9ZUY3|Q9ZUY3_ARATH Putative chorismate mutase/prephenate deh...    82   1e-14
tr|Q8LAP1|Q8LAP1_ARATH Putative chorismate mutase/prephenate deh...    82   1e-14
tr|Q7XLY2|Q7XLY2_ORYSA OSJNBa0042I15.8 protein OS=Oryza sativa G...    82   1e-14
tr|Q0WNL3|Q0WNL3_ARATH Putative chorismate mutase/prephenate deh...    82   1e-14
tr|Q0JDF7|Q0JDF7_ORYSJ Os04g0406600 protein OS=Oryza sativa subs...    82   1e-14
tr|Q01L56|Q01L56_ORYSA OSIGBa0142C11.3 protein OS=Oryza sativa G...    82   1e-14
tr|B4FSJ7|B4FSJ7_MAIZE Putative uncharacterized protein OS=Zea m...    82   1e-14
tr|B4FQG2|B4FQG2_MAIZE Putative uncharacterized protein OS=Zea m...    82   1e-14
tr|B4FGT4|B4FGT4_MAIZE Putative uncharacterized protein OS=Zea m...    82   1e-14
tr|A3ATK7|A3ATK7_ORYSJ Putative uncharacterized protein OS=Oryza...    82   1e-14
tr|A2XT43|A2XT43_ORYSI Putative uncharacterized protein OS=Oryza...    82   1e-14
tr|B8LQ85|B8LQ85_PICSI Putative uncharacterized protein OS=Picea...    82   2e-14
tr|O22241|O22241_ARATH Putative chloroplast prephenate dehydrata...    81   2e-14
tr|A9SJ56|A9SJ56_PHYPA Predicted protein (Fragment) OS=Physcomit...    79   9e-14

>tr|B8LLZ1|B8LLZ1_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 441

 Score = 85.5 bits (210), Expect = 1e-15
 Identities = 39/46 (84%), Positives = 43/46 (93%)
 Frame = -1

Query: 469 KYFEYLFYIDFEASMTDERAQNALREVQEFTSFLRVLGSYPMDITP 332
           K+FEY+FY+DFEASM D RAQNAL EVQEFTSFLRVLGSYPMD+TP
Sbjct: 380 KHFEYMFYVDFEASMADPRAQNALSEVQEFTSFLRVLGSYPMDMTP 425


>tr|Q6JJ29|Q6JJ29_IPOTF Prephenate dehydratase (Putative
           uncharacterized protein) OS=Ipomoea trifida PE=4 SV=1
          Length = 443

 Score = 85.1 bits (209), Expect = 2e-15
 Identities = 39/46 (84%), Positives = 43/46 (93%)
 Frame = -1

Query: 469 KYFEYLFYIDFEASMTDERAQNALREVQEFTSFLRVLGSYPMDITP 332
           K+FEY+FY+DFEASM D RAQNAL EVQEFTSFLRVLGSYPMD+TP
Sbjct: 391 KHFEYMFYVDFEASMADVRAQNALAEVQEFTSFLRVLGSYPMDMTP 436


>tr|B5LAT0|B5LAT0_CAPAN Putative arogenate dehydratase OS=Capsicum
           annuum PE=2 SV=1
          Length = 427

 Score = 85.1 bits (209), Expect = 2e-15
 Identities = 39/46 (84%), Positives = 43/46 (93%)
 Frame = -1

Query: 469 KYFEYLFYIDFEASMTDERAQNALREVQEFTSFLRVLGSYPMDITP 332
           K+FEY+FY+DFEASM D RAQNAL EVQEFTSFLRVLGSYPMD+TP
Sbjct: 375 KHFEYMFYVDFEASMADVRAQNALAEVQEFTSFLRVLGSYPMDMTP 420


>tr|Q9SGD6|Q9SGD6_ARATH T23G18.10 (Arogenate dehydratase isoform 5)
           (Putative uncharacterized protein At1g08250)
           OS=Arabidopsis thaliana GN=ADT PE=2 SV=1
          Length = 413

 Score = 84.0 bits (206), Expect = 4e-15
 Identities = 38/46 (82%), Positives = 43/46 (93%)
 Frame = -1

Query: 469 KYFEYLFYIDFEASMTDERAQNALREVQEFTSFLRVLGSYPMDITP 332
           K+FEY+FY+DFEASM + RAQNAL EVQEFTSFLRVLGSYPMD+TP
Sbjct: 359 KHFEYMFYVDFEASMAEARAQNALAEVQEFTSFLRVLGSYPMDMTP 404


>tr|A9PHG2|A9PHG2_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 444

 Score = 84.0 bits (206), Expect = 4e-15
 Identities = 39/46 (84%), Positives = 43/46 (93%)
 Frame = -1

Query: 469 KYFEYLFYIDFEASMTDERAQNALREVQEFTSFLRVLGSYPMDITP 332
           K+FEY+FYIDFEASM + RAQNAL EVQEFTSFLRVLGSYPMD+TP
Sbjct: 382 KHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTP 427


>tr|A9NXE9|A9NXE9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 142

 Score = 83.6 bits (205), Expect = 5e-15
 Identities = 38/48 (79%), Positives = 43/48 (89%)
 Frame = -1

Query: 466 YFEYLFYIDFEASMTDERAQNALREVQEFTSFLRVLGSYPMDITPSTR 323
           +FEY+FY+DFEASM D RAQNAL EVQEFT+FLRVLGSYPMDI+P  R
Sbjct: 90  FFEYIFYVDFEASMADPRAQNALAEVQEFTTFLRVLGSYPMDISPLNR 137


>tr|A5BWG3|A5BWG3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_041082 PE=4 SV=1
          Length = 411

 Score = 83.6 bits (205), Expect = 5e-15
 Identities = 38/46 (82%), Positives = 43/46 (93%)
 Frame = -1

Query: 469 KYFEYLFYIDFEASMTDERAQNALREVQEFTSFLRVLGSYPMDITP 332
           K+FEY+FY+DFEASM + RAQNAL EVQEFTSFLRVLGSYPMD+TP
Sbjct: 359 KHFEYMFYVDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTP 404


>tr|B7X944|B7X944_HEVBR Prephenate dehydratase OS=Hevea brasiliensis
           GN=pd2 PE=2 SV=1
          Length = 429

 Score = 83.2 bits (204), Expect = 6e-15
 Identities = 38/46 (82%), Positives = 43/46 (93%)
 Frame = -1

Query: 469 KYFEYLFYIDFEASMTDERAQNALREVQEFTSFLRVLGSYPMDITP 332
           K+FEY+FY+DFEASM + RAQNAL EVQEFTSFLRVLGSYPMD+TP
Sbjct: 377 KHFEYMFYLDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTP 422


>tr|Q9FNJ8|Q9FNJ8_ARATH Chorismate mutase/prephenate
           dehydratase-like protein (Arogenate dehydratase isoform
           6) (At5g22630/MDJ22_5) OS=Arabidopsis thaliana GN=ADT
           PE=2 SV=1
          Length = 425

 Score = 82.8 bits (203), Expect = 8e-15
 Identities = 38/51 (74%), Positives = 44/51 (86%)
 Frame = -1

Query: 469 KYFEYLFYIDFEASMTDERAQNALREVQEFTSFLRVLGSYPMDITPSTRCP 317
           K+FEY FY+DFEASM + RAQNAL EVQE+TSFLRVLGSYPMD+TP +  P
Sbjct: 371 KHFEYTFYVDFEASMAEARAQNALAEVQEYTSFLRVLGSYPMDMTPWSTLP 421


>tr|Q650W1|Q650W1_ORYSJ Os09g0565700 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0070E11.10 PE=2 SV=1
          Length = 401

 Score = 82.4 bits (202), Expect = 1e-14
 Identities = 37/46 (80%), Positives = 43/46 (93%)
 Frame = -1

Query: 469 KYFEYLFYIDFEASMTDERAQNALREVQEFTSFLRVLGSYPMDITP 332
           K+FEY+FYIDF+ASM + RAQNAL E+QEFTSFLRVLGSYPMD+TP
Sbjct: 337 KHFEYMFYIDFQASMAEVRAQNALSEIQEFTSFLRVLGSYPMDMTP 382